assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	1	1145435-1145648	1,1	PILER-CR,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	TAACAAGAGTTCCCCGCGCCAGCGGGGATAAACCGC,GAGTTCCCCGCGCCAGCGGGGATAAACCGC	36,30	0	0	NA	NA	I-E:I-E	2,3	3	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|37aa|down_1|NZ_CP038386.1_1147788_1147899_-	NA|83aa|up_9|NZ_CP038386.1_1135912_1136161_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038386.1_1136160_1136496_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038386.1_1136566_1137358_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038386.1_1137585_1139223_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038386.1_1139310_1140609_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038386.1_1140668_1141583_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038386.1_1141579_1142728_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP038386.1_1142742_1143636_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038386.1_1143649_1144270_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038386.1_1144424_1145096_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038386.1_1146283_1147762_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|37aa|down_1|NZ_CP038386.1_1147788_1147899_-	NA	NA|377aa|down_2|NZ_CP038386.1_1147935_1149066_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_3|NZ_CP038386.1_1149384_1150170_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_4|NZ_CP038386.1_1150239_1151694_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_5|NZ_CP038386.1_1151715_1153125_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|NZ_CP038386.1_1153102_1153882_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP038386.1_1154886_1155462_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP038386.1_1155478_1155739_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP038386.1_1155729_1157001_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	2	1171342-1171555	2,1,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCGGC,GTGTTCCCCGCGCCAGCGGGGATAAACCGGC,GTGTTCCCCGCGCCAGCGGGGATAAACCGGC	31,31,31	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA	NA|245aa|up_9|NZ_CP038386.1_1161344_1162079_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038386.1_1162342_1162495_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038386.1_1162686_1165386_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038386.1_1165483_1167046_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038386.1_1167042_1167579_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038386.1_1167590_1168646_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038386.1_1168656_1169403_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038386.1_1169384_1170035_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038386.1_1170031_1170955_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038386.1_1170951_1171245_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038386.1_1171634_1172672_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038386.1_1172923_1173832_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038386.1_1173833_1175261_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038386.1_1175260_1175866_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038386.1_1175915_1176239_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038386.1_1176432_1176744_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038386.1_1176762_1177473_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038386.1_1177472_1177952_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038386.1_1177948_1178998_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038386.1_1178978_1179740_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	3	1696280-1696385	2	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|357aa|up_4|NZ_CP038386.1_1690259_1691330_-,NA	NA|397aa|up_9|NZ_CP038386.1_1683259_1684450_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_8|NZ_CP038386.1_1684446_1685706_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_7|NZ_CP038386.1_1685695_1687324_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_6|NZ_CP038386.1_1687596_1688955_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_5|NZ_CP038386.1_1688959_1690036_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_4|NZ_CP038386.1_1690259_1691330_-	NA	NA|293aa|up_3|NZ_CP038386.1_1691793_1692672_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|217aa|up_2|NZ_CP038386.1_1694094_1694745_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038386.1_1694798_1695053_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038386.1_1695052_1696183_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038386.1_1696409_1698695_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038386.1_1699390_1703143_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038386.1_1703283_1704006_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038386.1_1704152_1706780_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP038386.1_1706928_1708617_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038386.1_1708613_1709237_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|399aa|down_6|NZ_CP038386.1_1712397_1713594_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|265aa|down_7|NZ_CP038386.1_1715221_1716016_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038386.1_1716088_1716871_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038386.1_1716875_1717652_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	4	2175645-2175794	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|22aa|up_2|NZ_CP038386.1_2173732_2173798_+,NA	NA|273aa|up_9|NZ_CP038386.1_2167698_2168517_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038386.1_2168513_2169080_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038386.1_2169389_2171162_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038386.1_2171279_2171732_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038386.1_2171760_2172501_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038386.1_2172535_2173057_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038386.1_2173058_2173661_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038386.1_2173732_2173798_+	NA	NA|204aa|up_1|NZ_CP038386.1_2173936_2174548_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038386.1_2174556_2175567_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038386.1_2175812_2176598_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038386.1_2176594_2177350_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038386.1_2177428_2178361_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038386.1_2178376_2179699_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038386.1_2179818_2180790_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038386.1_2180920_2182363_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038386.1_2182490_2183360_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038386.1_2183697_2185173_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038386.1_2185407_2187219_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038386.1_2187255_2187897_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	5	2373468-2373591	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|30aa|down_7|NZ_CP038386.1_2382487_2382577_+	NA|79aa|up_9|NZ_CP038386.1_2362374_2362611_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|NZ_CP038386.1_2362921_2364334_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|NZ_CP038386.1_2364890_2365100_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|NZ_CP038386.1_2365555_2366182_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_5|NZ_CP038386.1_2366202_2368305_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_4|NZ_CP038386.1_2368317_2368956_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_3|NZ_CP038386.1_2369019_2369688_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_2|NZ_CP038386.1_2369684_2370470_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_1|NZ_CP038386.1_2370473_2371286_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|102aa|up_0|NZ_CP038386.1_2373027_2373333_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP038386.1_2373905_2375162_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP038386.1_2375202_2376576_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP038386.1_2376790_2377432_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP038386.1_2377471_2378620_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP038386.1_2378910_2380122_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP038386.1_2380234_2381167_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP038386.1_2381163_2382189_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP038386.1_2382487_2382577_+	NA	NA|390aa|down_8|NZ_CP038386.1_2382743_2383913_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP038386.1_2384058_2384640_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	6	3108918-3109009	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|70aa|up_9|NZ_CP038386.1_3098168_3098378_-,NA	NA|70aa|up_9|NZ_CP038386.1_3098168_3098378_-	NA	NA|1321aa|up_8|NZ_CP038386.1_3098432_3102395_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP038386.1_3102434_3103073_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP038386.1_3103360_3104452_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP038386.1_3104451_3105144_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP038386.1_3105155_3105542_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP038386.1_3105549_3106350_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP038386.1_3106359_3106950_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP038386.1_3106960_3107455_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP038386.1_3107475_3108804_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP038386.1_3109432_3110029_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP038386.1_3110049_3110277_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP038386.1_3110314_3111556_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP038386.1_3111846_3113103_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP038386.1_3113362_3114283_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP038386.1_3114282_3114588_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP038386.1_3114741_3115341_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP038386.1_3115337_3117884_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP038386.1_3117883_3119056_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP038386.1_3119185_3119878_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	7	4324922-4325056	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|190aa|up_7|NZ_CP038386.1_4315310_4315880_-,NA|246aa|down_4|NZ_CP038386.1_4332349_4333087_-	NA|44aa|up_9|NZ_CP038386.1_4313203_4313335_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038386.1_4313423_4315082_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038386.1_4315310_4315880_-	NA	NA|328aa|up_6|NZ_CP038386.1_4316251_4317235_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038386.1_4317210_4318821_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038386.1_4318804_4319503_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038386.1_4319589_4320354_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038386.1_4320439_4321318_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038386.1_4321656_4323357_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038386.1_4323367_4324870_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038386.1_4325069_4325765_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038386.1_4325839_4328191_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038386.1_4328354_4331261_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038386.1_4331272_4331932_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|246aa|down_4|NZ_CP038386.1_4332349_4333087_-	NA	NA|272aa|down_5|NZ_CP038386.1_4333381_4334197_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_6|NZ_CP038386.1_4334451_4336800_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038386.1_4336852_4338139_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038386.1_4338138_4339128_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038386.1_4339124_4339946_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	8	4349802-4349938	3	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAATCACCAATATTGAAAAT	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA	NA|105aa|up_9|NZ_CP038386.1_4341177_4341492_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP038386.1_4341494_4341728_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP038386.1_4341813_4342293_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP038386.1_4342484_4344347_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP038386.1_4344339_4344870_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP038386.1_4344977_4346309_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP038386.1_4346366_4346654_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP038386.1_4346650_4347937_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP038386.1_4347987_4348929_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP038386.1_4348943_4349714_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP038386.1_4350187_4351702_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP038386.1_4351732_4352875_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP038386.1_4353003_4354221_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP038386.1_4354294_4355848_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP038386.1_4355956_4356742_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP038386.1_4356747_4357338_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP038386.1_4357456_4357852_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP038386.1_4358112_4361334_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP038386.1_4361351_4362500_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP038386.1_4362955_4363777_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_013167975.1_ASM1316797v1	NZ_CP038386	Escherichia coli O157:H7 strain DEC5D chromosome, complete genome	9	4563720-4563869	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|105aa|up_8|NZ_CP038386.1_4553553_4553868_-,NA|270aa|up_6|NZ_CP038386.1_4554269_4555079_-,NA	NA|423aa|up_9|NZ_CP038386.1_4551998_4553267_-	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|105aa|up_8|NZ_CP038386.1_4553553_4553868_-	NA	NA|72aa|up_7|NZ_CP038386.1_4553887_4554103_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|270aa|up_6|NZ_CP038386.1_4554269_4555079_-	NA	NA|417aa|up_5|NZ_CP038386.1_4555190_4556441_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP038386.1_4556910_4557930_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038386.1_4558059_4559562_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038386.1_4559722_4560805_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038386.1_4560804_4561905_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038386.1_4562171_4563683_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038386.1_4564036_4564480_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038386.1_4564479_4567335_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038386.1_4567389_4568586_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038386.1_4568778_4569282_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038386.1_4569327_4569744_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038386.1_4569905_4570910_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP038386.1_4572932_4573385_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP038386.1_4573529_4574123_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP038386.1_4574193_4574907_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP038386.1_4575037_4575433_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
