assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	1	1166280-1166430	1,1	PILER-CR,CRISPRCasFinder	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACC	29,28	0	0	NA	NA	I-E:I-E	2,2	2	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA,NA|37aa|down_1|NZ_CP038389.1_1168571_1168682_-	NA|83aa|up_9|NZ_CP038389.1_1156756_1157005_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038389.1_1157004_1157340_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038389.1_1157410_1158202_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038389.1_1158429_1160067_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038389.1_1160154_1161453_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038389.1_1161512_1162427_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038389.1_1162423_1163572_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP038389.1_1163586_1164480_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038389.1_1164493_1165114_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038389.1_1165268_1165940_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038389.1_1167066_1168545_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|37aa|down_1|NZ_CP038389.1_1168571_1168682_-	NA	NA|377aa|down_2|NZ_CP038389.1_1168718_1169849_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_3|NZ_CP038389.1_1170167_1170953_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_4|NZ_CP038389.1_1171022_1172477_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_5|NZ_CP038389.1_1172498_1173908_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|NZ_CP038389.1_1173885_1174665_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP038389.1_1175669_1176245_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP038389.1_1176261_1176522_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP038389.1_1176512_1177784_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	2	1192125-1193007	2,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	14,14,14	14	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA,NA	NA|245aa|up_9|NZ_CP038389.1_1182127_1182862_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038389.1_1183125_1183278_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038389.1_1183469_1186169_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038389.1_1186266_1187829_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038389.1_1187825_1188362_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038389.1_1188373_1189429_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038389.1_1189439_1190186_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038389.1_1190167_1190818_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038389.1_1190814_1191738_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038389.1_1191734_1192028_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038389.1_1193088_1194126_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038389.1_1194377_1195286_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038389.1_1195287_1196715_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038389.1_1196714_1197320_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038389.1_1197369_1197693_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038389.1_1197886_1198198_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038389.1_1198216_1198927_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038389.1_1198926_1199406_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038389.1_1199402_1200452_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038389.1_1200432_1201194_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	3	1739457-1739562	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA|357aa|up_5|NZ_CP038389.1_1733436_1734507_-,NA	NA|420aa|up_9|NZ_CP038389.1_1727623_1728883_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP038389.1_1728872_1730501_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP038389.1_1730773_1732132_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP038389.1_1732136_1733213_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP038389.1_1733436_1734507_-	NA	NA|293aa|up_4|NZ_CP038389.1_1734970_1735849_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP038389.1_1736000_1737191_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP038389.1_1737271_1737922_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038389.1_1737975_1738230_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038389.1_1738229_1739360_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038389.1_1739586_1741872_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038389.1_1742567_1746320_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038389.1_1746460_1747183_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038389.1_1747329_1749957_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP038389.1_1750105_1751794_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038389.1_1751790_1752414_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|265aa|down_6|NZ_CP038389.1_1756953_1757748_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_7|NZ_CP038389.1_1757820_1758603_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP038389.1_1758607_1759384_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|950aa|down_9|NZ_CP038389.1_1759658_1762508_+	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	4	2277126-2277275	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA|22aa|up_2|NZ_CP038389.1_2275213_2275279_+,NA	NA|165aa|up_9|NZ_CP038389.1_2269504_2269999_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038389.1_2269995_2270562_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038389.1_2270871_2272644_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038389.1_2272761_2273214_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038389.1_2273242_2273983_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038389.1_2274017_2274539_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038389.1_2274540_2275143_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038389.1_2275213_2275279_+	NA	NA|204aa|up_1|NZ_CP038389.1_2275417_2276029_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038389.1_2276037_2277048_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038389.1_2277293_2278079_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038389.1_2278075_2278831_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038389.1_2278909_2279842_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038389.1_2279857_2281180_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038389.1_2281299_2282271_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038389.1_2282401_2283844_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038389.1_2283971_2284841_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038389.1_2285178_2286654_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038389.1_2286888_2288700_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038389.1_2288736_2289378_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	5	3273448-3273539	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA|70aa|up_8|NZ_CP038389.1_3262699_3262909_-,NA	NA|503aa|up_9|NZ_CP038389.1_3261032_3262541_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|70aa|up_8|NZ_CP038389.1_3262699_3262909_-	NA	NA|1321aa|up_7|NZ_CP038389.1_3262963_3266926_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_6|NZ_CP038389.1_3266965_3267604_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_5|NZ_CP038389.1_3267891_3268983_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_4|NZ_CP038389.1_3268982_3269675_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_3|NZ_CP038389.1_3269686_3270073_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_2|NZ_CP038389.1_3270080_3270881_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|165aa|up_1|NZ_CP038389.1_3271490_3271985_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP038389.1_3272005_3273334_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|383aa|down_0|NZ_CP038389.1_3274350_3275498_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|202aa|down_1|NZ_CP038389.1_3275885_3276491_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_2|NZ_CP038389.1_3276511_3276739_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_3|NZ_CP038389.1_3276776_3278018_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_4|NZ_CP038389.1_3278308_3279565_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_5|NZ_CP038389.1_3279824_3280745_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_6|NZ_CP038389.1_3280744_3281050_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_7|NZ_CP038389.1_3281203_3281803_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_8|NZ_CP038389.1_3281799_3284346_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_9|NZ_CP038389.1_3284345_3285518_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	6	3861010-3861122	3	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TTTTCTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA|47aa|up_9|NZ_CP038389.1_3857220_3857361_-,NA|34aa|up_4|NZ_CP038389.1_3858621_3858723_-,NA|94aa|up_3|NZ_CP038389.1_3858813_3859095_-,NA|66aa|up_2|NZ_CP038389.1_3859138_3859336_-,NA|95aa|up_1|NZ_CP038389.1_3859563_3859848_-,NA	NA|47aa|up_9|NZ_CP038389.1_3857220_3857361_-	NA	NA|121aa|up_8|NZ_CP038389.1_3857357_3857720_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|97aa|up_7|NZ_CP038389.1_3857716_3858007_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|57aa|up_6|NZ_CP038389.1_3857999_3858170_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_5|NZ_CP038389.1_3858169_3858625_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|34aa|up_4|NZ_CP038389.1_3858621_3858723_-	NA	NA|94aa|up_3|NZ_CP038389.1_3858813_3859095_-	NA	NA|66aa|up_2|NZ_CP038389.1_3859138_3859336_-	NA	NA|95aa|up_1|NZ_CP038389.1_3859563_3859848_-	NA	NA|234aa|up_0|NZ_CP038389.1_3859844_3860546_-	pfam06992, Phage_lambda_P, Replication protein P	NA|180aa|down_0|NZ_CP038389.1_3861558_3862098_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|76aa|down_1|NZ_CP038389.1_3862128_3862356_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|231aa|down_2|NZ_CP038389.1_3862466_3863159_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|536aa|down_3|NZ_CP038389.1_3863265_3864873_+	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|69aa|down_4|NZ_CP038389.1_3865461_3865668_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|99aa|down_5|NZ_CP038389.1_3865743_3866040_+	pfam06064, Gam, Host-nuclease inhibitor protein Gam	NA|262aa|down_6|NZ_CP038389.1_3866045_3866831_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_7|NZ_CP038389.1_3866827_3867508_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|54aa|down_8|NZ_CP038389.1_3867504_3867666_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|186aa|down_9|NZ_CP038389.1_3867658_3868216_+	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam)
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	7	4089822-4089963	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	GTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTG	41	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA,NA	NA|514aa|up_9|NZ_CP038389.1_4078082_4079624_+	COG3851, UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific [Signal transduction mechanisms]	NA|439aa|up_8|NZ_CP038389.1_4079696_4081013_+	cd17488, MFS_UhpC, Membrane sensor protein UhpC of the Major Facilitator Superfamily of transporters	NA|344aa|up_7|NZ_CP038389.1_4081009_4082041_+	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|693aa|up_6|NZ_CP038389.1_4082109_4084188_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|349aa|up_5|NZ_CP038389.1_4084199_4085246_+	PRK11432, fbpC, ferric ABC transporter ATP-binding protein	NA|92aa|up_4|NZ_CP038389.1_4085405_4085681_+	PRK11352, PRK11352, formaldehyde-responsive transcriptional repressor FrmR	NA|370aa|up_3|NZ_CP038389.1_4085715_4086825_+	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|278aa|up_2|NZ_CP038389.1_4086917_4087751_+	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|180aa|up_1|NZ_CP038389.1_4087875_4088415_-	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|up_0|NZ_CP038389.1_4088516_4089728_-	PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional	NA|338aa|down_0|NZ_CP038389.1_4090004_4091018_-	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated	NA|317aa|down_1|NZ_CP038389.1_4091014_4091965_-	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated	NA|270aa|down_2|NZ_CP038389.1_4091961_4092771_-	PRK11342, mhpD, 2-keto-4-pentenoate hydratase; Provisional	NA|289aa|down_3|NZ_CP038389.1_4092780_4093647_-	TIGR03343, 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate_hydrolase, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase	NA|315aa|down_4|NZ_CP038389.1_4093664_4094609_-	cd07365, MhpB_like, Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB), which catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate	NA|555aa|down_5|NZ_CP038389.1_4094610_4096275_-	PRK06183, mhpA, bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA|316aa|down_6|NZ_CP038389.1_4096351_4097299_+	PRK09834, PRK09834, DNA-binding transcriptional regulator	NA|259aa|down_7|NZ_CP038389.1_4097413_4098190_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|318aa|down_8|NZ_CP038389.1_4098209_4099163_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|361aa|down_9|NZ_CP038389.1_4099199_4100282_+	PRK09526, lacI, lac repressor; Reviewed
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	8	4494030-4494164	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA|190aa|up_7|NZ_CP038389.1_4484418_4484988_-,NA|241aa|down_4|NZ_CP038389.1_4501457_4502180_-	NA|44aa|up_9|NZ_CP038389.1_4482311_4482443_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038389.1_4482531_4484190_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038389.1_4484418_4484988_-	NA	NA|328aa|up_6|NZ_CP038389.1_4485359_4486343_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038389.1_4486318_4487929_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038389.1_4487912_4488611_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038389.1_4488697_4489462_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038389.1_4489547_4490426_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038389.1_4490764_4492465_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038389.1_4492475_4493978_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038389.1_4494177_4494873_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038389.1_4494947_4497299_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038389.1_4497462_4500369_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038389.1_4500380_4501040_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|241aa|down_4|NZ_CP038389.1_4501457_4502180_-	NA	NA|272aa|down_5|NZ_CP038389.1_4502474_4503290_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP038389.1_4503544_4505899_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038389.1_4505951_4507238_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038389.1_4507237_4508227_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038389.1_4508223_4509045_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	9	4518901-4519037	4	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAATCACCAATATTGAAAAT	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA,NA	NA|105aa|up_9|NZ_CP038389.1_4510276_4510591_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP038389.1_4510593_4510827_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP038389.1_4510912_4511392_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP038389.1_4511583_4513446_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP038389.1_4513438_4513969_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP038389.1_4514076_4515408_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP038389.1_4515465_4515753_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP038389.1_4515749_4517036_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP038389.1_4517086_4518028_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP038389.1_4518042_4518813_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP038389.1_4519286_4520801_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP038389.1_4520831_4521974_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP038389.1_4522102_4523320_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP038389.1_4523393_4524947_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP038389.1_4525055_4525841_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP038389.1_4525846_4526437_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP038389.1_4526555_4526951_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP038389.1_4527211_4530433_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP038389.1_4530450_4531599_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP038389.1_4532054_4532876_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_013167995.1_ASM1316799v1	NZ_CP038389	Escherichia coli O157:H7 strain DEC5B chromosome, complete genome	10	4712820-4712969	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,RT	NA,NA|591aa|down_6|NZ_CP038389.1_4720066_4721839_-	NA|410aa|up_9|NZ_CP038389.1_4699249_4700478_+	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|383aa|up_8|NZ_CP038389.1_4700603_4701751_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|352aa|up_7|NZ_CP038389.1_4701795_4702851_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|284aa|up_6|NZ_CP038389.1_4703391_4704243_+	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms]	NA|276aa|up_5|NZ_CP038389.1_4704702_4705530_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP038389.1_4706010_4707030_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038389.1_4707159_4708662_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038389.1_4708822_4709905_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038389.1_4709904_4711005_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038389.1_4711271_4712783_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038389.1_4713136_4713580_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038389.1_4713579_4716435_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038389.1_4716489_4717686_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038389.1_4717878_4718382_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038389.1_4718427_4718844_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038389.1_4719005_4720010_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|591aa|down_6|NZ_CP038389.1_4720066_4721839_-	NA	NA|151aa|down_7|NZ_CP038389.1_4721961_4722414_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP038389.1_4722558_4723152_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|NZ_CP038389.1_4723222_4723936_+	PRK12742, PRK12742, SDR family oxidoreductase
