assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	1	1151245-1151459	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACCGC,GAGTTCCCCGCGCCAGCGGGGATAAACC,GAGTTCCCCGCGCCAGCGGGGATAAACCGC	30,28,30	0	0	NA	NA	I-E:I-E:I-E	3,3,3	3	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|37aa|down_1|NZ_CP038394.1_1153599_1153710_-	NA|83aa|up_9|NZ_CP038394.1_1141721_1141970_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038394.1_1141969_1142305_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038394.1_1142375_1143167_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038394.1_1143394_1145032_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038394.1_1145119_1146418_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038394.1_1146477_1147392_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038394.1_1147388_1148537_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|298aa|up_2|NZ_CP038394.1_1148551_1149445_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038394.1_1149458_1150079_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038394.1_1150233_1150905_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038394.1_1152094_1153573_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|37aa|down_1|NZ_CP038394.1_1153599_1153710_-	NA	NA|377aa|down_2|NZ_CP038394.1_1153746_1154877_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_3|NZ_CP038394.1_1155195_1155981_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|487aa|down_4|NZ_CP038394.1_1156050_1157511_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_5|NZ_CP038394.1_1157532_1158942_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|NZ_CP038394.1_1158919_1159699_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP038394.1_1160703_1161279_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP038394.1_1161295_1161556_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP038394.1_1161546_1162818_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	2	1177159-1177980	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	12,13,13	13	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA	NA|245aa|up_9|NZ_CP038394.1_1167161_1167896_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038394.1_1168159_1168312_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038394.1_1168503_1171203_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038394.1_1171300_1172863_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038394.1_1172859_1173396_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038394.1_1173407_1174463_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038394.1_1174473_1175220_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038394.1_1175201_1175852_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038394.1_1175848_1176772_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038394.1_1176768_1177062_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038394.1_1178061_1179099_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038394.1_1179350_1180259_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038394.1_1180260_1181688_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038394.1_1181687_1182293_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038394.1_1182342_1182666_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038394.1_1182859_1183171_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038394.1_1183189_1183900_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038394.1_1183899_1184379_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038394.1_1184375_1185425_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038394.1_1185405_1186167_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	3	1728742-1728847	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|357aa|up_4|NZ_CP038394.1_1722735_1723806_-,NA	NA|397aa|up_9|NZ_CP038394.1_1715735_1716926_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_8|NZ_CP038394.1_1716922_1718182_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_7|NZ_CP038394.1_1718171_1719800_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_6|NZ_CP038394.1_1720072_1721431_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_5|NZ_CP038394.1_1721435_1722512_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_4|NZ_CP038394.1_1722735_1723806_-	NA	NA|293aa|up_3|NZ_CP038394.1_1724269_1725148_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|217aa|up_2|NZ_CP038394.1_1726570_1727221_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038394.1_1727260_1727515_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038394.1_1727514_1728645_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038394.1_1728871_1731157_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038394.1_1731852_1735605_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038394.1_1735745_1736468_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038394.1_1736614_1739242_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP038394.1_1739390_1741079_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038394.1_1741075_1741699_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|399aa|down_6|NZ_CP038394.1_1744863_1746060_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|265aa|down_7|NZ_CP038394.1_1747687_1748482_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038394.1_1748554_1749337_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038394.1_1749341_1750118_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	4	2216593-2216742	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|22aa|up_2|NZ_CP038394.1_2214680_2214746_+,NA	NA|273aa|up_9|NZ_CP038394.1_2208647_2209466_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038394.1_2209462_2210029_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038394.1_2210338_2212111_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038394.1_2212228_2212681_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038394.1_2212709_2213450_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038394.1_2213484_2214006_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038394.1_2214007_2214610_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038394.1_2214680_2214746_+	NA	NA|204aa|up_1|NZ_CP038394.1_2214884_2215496_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038394.1_2215504_2216515_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038394.1_2216760_2217546_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038394.1_2217542_2218298_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038394.1_2218376_2219309_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038394.1_2219324_2220647_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038394.1_2220766_2221738_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038394.1_2221868_2223311_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038394.1_2223438_2224308_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038394.1_2224645_2226121_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038394.1_2226355_2228167_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038394.1_2228203_2228845_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	5	2457890-2458013	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|30aa|down_7|NZ_CP038394.1_2466909_2466999_+	NA|471aa|up_9|NZ_CP038394.1_2447343_2448756_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP038394.1_2449312_2449522_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP038394.1_2449977_2450604_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP038394.1_2450624_2452727_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP038394.1_2452739_2453378_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP038394.1_2453441_2454110_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP038394.1_2454106_2454892_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP038394.1_2454895_2455708_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP038394.1_2455719_2457324_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP038394.1_2457449_2457755_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP038394.1_2458327_2459584_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP038394.1_2459624_2460998_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP038394.1_2461212_2461854_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP038394.1_2461893_2463042_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP038394.1_2463332_2464544_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP038394.1_2464656_2465589_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP038394.1_2465585_2466611_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP038394.1_2466909_2466999_+	NA	NA|390aa|down_8|NZ_CP038394.1_2467165_2468335_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP038394.1_2468480_2469062_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	6	3294894-3294985	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|70aa|up_9|NZ_CP038394.1_3284144_3284354_-,NA	NA|70aa|up_9|NZ_CP038394.1_3284144_3284354_-	NA	NA|1321aa|up_8|NZ_CP038394.1_3284408_3288371_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP038394.1_3288410_3289049_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP038394.1_3289336_3290428_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP038394.1_3290427_3291120_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP038394.1_3291131_3291518_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP038394.1_3291525_3292326_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP038394.1_3292335_3292926_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP038394.1_3292936_3293431_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP038394.1_3293451_3294780_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP038394.1_3295408_3296005_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP038394.1_3296025_3296253_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP038394.1_3296290_3297532_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|428aa|down_3|NZ_CP038394.1_3297822_3299106_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP038394.1_3299365_3300286_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP038394.1_3300285_3300591_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP038394.1_3300744_3301344_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP038394.1_3301340_3303887_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP038394.1_3303886_3305059_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP038394.1_3305188_3305881_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	7	4464849-4464983	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA|190aa|up_7|NZ_CP038394.1_4455237_4455807_-,NA|246aa|down_4|NZ_CP038394.1_4472276_4473014_-	NA|44aa|up_9|NZ_CP038394.1_4453130_4453262_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038394.1_4453350_4455009_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038394.1_4455237_4455807_-	NA	NA|328aa|up_6|NZ_CP038394.1_4456178_4457162_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038394.1_4457137_4458748_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038394.1_4458731_4459430_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038394.1_4459516_4460281_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038394.1_4460366_4461245_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038394.1_4461583_4463284_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038394.1_4463294_4464797_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038394.1_4464996_4465692_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038394.1_4465766_4468118_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038394.1_4468281_4471188_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038394.1_4471199_4471859_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|246aa|down_4|NZ_CP038394.1_4472276_4473014_-	NA	NA|272aa|down_5|NZ_CP038394.1_4473308_4474124_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_6|NZ_CP038394.1_4474378_4476727_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038394.1_4476779_4478066_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038394.1_4478065_4479055_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038394.1_4479051_4479873_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	8	4489729-4489865	3	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAATCACCAATATTGAAAAT	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA	NA|105aa|up_9|NZ_CP038394.1_4481104_4481419_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP038394.1_4481421_4481655_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP038394.1_4481740_4482220_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP038394.1_4482411_4484274_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP038394.1_4484266_4484797_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP038394.1_4484904_4486236_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP038394.1_4486293_4486581_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP038394.1_4486577_4487864_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP038394.1_4487914_4488856_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP038394.1_4488870_4489641_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP038394.1_4490114_4491629_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP038394.1_4491659_4492802_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP038394.1_4492930_4494148_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP038394.1_4494221_4495775_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP038394.1_4495883_4496669_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP038394.1_4496674_4497265_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP038394.1_4497383_4497779_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP038394.1_4498039_4501261_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP038394.1_4501278_4502427_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP038394.1_4502882_4503704_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_013168015.1_ASM1316801v1	NZ_CP038394	Escherichia coli O157:H7 strain DEC5A chromosome, complete genome	9	4721728-4721877	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG	NA,NA|609aa|down_6|NZ_CP038394.1_4728974_4730801_-	NA|333aa|up_9|NZ_CP038394.1_4708912_4709911_+	PRK11228, fecC, iron-dicitrate ABC transporter permease FecC	NA|319aa|up_8|NZ_CP038394.1_4709907_4710864_+	PRK09777, fecD, Fe(3+) dicitrate ABC transporter permease subunit FecD	NA|256aa|up_7|NZ_CP038394.1_4710864_4711632_+	PRK11231, fecE, Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	NA|405aa|up_6|NZ_CP038394.1_4711858_4713072_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|422aa|up_5|NZ_CP038394.1_4713186_4714452_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP038394.1_4714918_4715938_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038394.1_4716067_4717570_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038394.1_4717730_4718813_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038394.1_4718812_4719913_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038394.1_4720179_4721691_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038394.1_4722044_4722488_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038394.1_4722487_4725343_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038394.1_4725397_4726594_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038394.1_4726786_4727290_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038394.1_4727335_4727752_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038394.1_4727913_4728918_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|609aa|down_6|NZ_CP038394.1_4728974_4730801_-	NA	NA|151aa|down_7|NZ_CP038394.1_4730923_4731376_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP038394.1_4731520_4732114_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|NZ_CP038394.1_4732184_4732898_+	PRK12742, PRK12742, SDR family oxidoreductase
