assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013171285.1_ASM1317128v1	NZ_CP053044	Proteus cibarius strain HNCF43W chromosome, complete genome	1	251868-251941	1	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	Orphan	CACGGTGAAGAAGGCGGATGCTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	NA,NA|53aa|down_3|NZ_CP053044.1_254520_254679_-	NA|327aa|up_9|NZ_CP053044.1_237245_238226_-	PRK10985, PRK10985, putative hydrolase; Provisional	NA|202aa|up_8|NZ_CP053044.1_238325_238931_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|287aa|up_7|NZ_CP053044.1_239643_240504_+	PRK11557, PRK11557, MurR/RpiR family transcriptional regulator	NA|515aa|up_6|NZ_CP053044.1_240653_242198_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|582aa|up_5|NZ_CP053044.1_242297_244043_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|563aa|up_4|NZ_CP053044.1_244583_246272_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|645aa|up_3|NZ_CP053044.1_246603_248538_-	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|182aa|up_2|NZ_CP053044.1_248659_249205_+	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional	NA|618aa|up_1|NZ_CP053044.1_249210_251064_+	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|68aa|up_0|NZ_CP053044.1_251077_251281_+	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]	NA|73aa|down_0|NZ_CP053044.1_252088_252307_-	PRK02793, PRK02793, phi X174 lysis protein; Provisional	NA|251aa|down_1|NZ_CP053044.1_252641_253394_+	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|294aa|down_2|NZ_CP053044.1_253492_254374_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|53aa|down_3|NZ_CP053044.1_254520_254679_-	NA	NA|235aa|down_4|NZ_CP053044.1_255026_255731_+	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown]	NA|132aa|down_5|NZ_CP053044.1_255740_256136_+	PRK00207, PRK00207, sulfurtransferase complex subunit TusD	NA|123aa|down_6|NZ_CP053044.1_256135_256504_+	PRK00211, PRK00211, sulfurtransferase complex subunit TusC	NA|98aa|down_7|NZ_CP053044.1_256535_256829_+	PRK13510, PRK13510, sulfurtransferase complex subunit TusB	NA|125aa|down_8|NZ_CP053044.1_256956_257331_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|157aa|down_9|NZ_CP053044.1_257429_257900_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated
GCF_013171285.1_ASM1317128v1	NZ_CP053044	Proteus cibarius strain HNCF43W chromosome, complete genome	2	864245-864360	2	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	Orphan	ATGGAAACGTCGAAAGCGAGGAATC	25	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	NA|125aa|up_7|NZ_CP053044.1_859902_860277_-,NA|165aa|up_6|NZ_CP053044.1_860687_861182_+,NA|68aa|up_5|NZ_CP053044.1_861393_861597_-,NA|153aa|up_2|NZ_CP053044.1_862934_863393_+,NA|70aa|up_1|NZ_CP053044.1_863481_863691_+,NA|131aa|down_1|NZ_CP053044.1_865622_866015_+,NA|83aa|down_7|NZ_CP053044.1_870411_870660_+	NA|166aa|up_9|NZ_CP053044.1_858453_858951_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|276aa|up_8|NZ_CP053044.1_859009_859837_-	pfam10065, DUF2303, Uncharacterized conserved protein (DUF2303)	NA|125aa|up_7|NZ_CP053044.1_859902_860277_-	NA	NA|165aa|up_6|NZ_CP053044.1_860687_861182_+	NA	NA|68aa|up_5|NZ_CP053044.1_861393_861597_-	NA	NA|221aa|up_4|NZ_CP053044.1_861949_862612_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|71aa|up_3|NZ_CP053044.1_862652_862865_+	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|153aa|up_2|NZ_CP053044.1_862934_863393_+	NA	NA|70aa|up_1|NZ_CP053044.1_863481_863691_+	NA	NA|60aa|up_0|NZ_CP053044.1_863680_863860_+	pfam13973, DUF4222, Domain of unknown function (DUF4222)	NA|213aa|down_0|NZ_CP053044.1_864987_865626_+	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam)	NA|131aa|down_1|NZ_CP053044.1_865622_866015_+	NA	NA|57aa|down_2|NZ_CP053044.1_866014_866185_+	TIGR03655, hypothetical_protein_VT2-Sap32, restriction alleviation protein, Lar family	NA|268aa|down_3|NZ_CP053044.1_866648_867452_+	pfam04383, KilA-N, KilA-N domain	NA|342aa|down_4|NZ_CP053044.1_867448_868474_+	pfam06147, DUF968, Protein of unknown function (DUF968)	NA|128aa|down_5|NZ_CP053044.1_868501_868885_+	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|389aa|down_6|NZ_CP053044.1_869125_870292_+	PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	NA|83aa|down_7|NZ_CP053044.1_870411_870660_+	NA	NA|130aa|down_8|NZ_CP053044.1_870988_871378_+	pfam16931, Phage_holin_8, Putative phage holin	NA|100aa|down_9|NZ_CP053044.1_871374_871674_+	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3
GCF_013171285.1_ASM1317128v1	NZ_CP053044	Proteus cibarius strain HNCF43W chromosome, complete genome	3	1150147-1150235	3	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	Orphan	TGTTCACTGCCACATAGGCAGCTTAGAAA	29	0	0	NA	NA	I-F	1	1	Orphan	cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	NA,NA	NA|128aa|up_9|NZ_CP053044.1_1137604_1137988_-	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|115aa|up_8|NZ_CP053044.1_1138397_1138742_-	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486)	NA|135aa|up_7|NZ_CP053044.1_1139198_1139603_+	pfam07007, LprI, Lysozyme inhibitor LprI	NA|235aa|up_6|NZ_CP053044.1_1139726_1140431_-	COG1556, COG1556, Uncharacterized conserved protein [Function unknown]	NA|474aa|up_5|NZ_CP053044.1_1140432_1141854_-	TIGR00273, Uncharacterized_electron_transport_protein_YkgF, iron-sulfur cluster-binding protein	NA|240aa|up_4|NZ_CP053044.1_1141866_1142586_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|509aa|up_3|NZ_CP053044.1_1142705_1144232_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|517aa|up_2|NZ_CP053044.1_1146159_1147710_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|193aa|up_1|NZ_CP053044.1_1148217_1148796_+	cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction	NA|296aa|up_0|NZ_CP053044.1_1148886_1149774_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|385aa|down_0|NZ_CP053044.1_1150589_1151744_+	pfam06958, Pyocin_S, S-type Pyocin	NA|179aa|down_1|NZ_CP053044.1_1151762_1152299_+	pfam01024, Colicin, Colicin pore forming domain	NA|114aa|down_2|NZ_CP053044.1_1152320_1152662_-	pfam03526, Microcin, Colicin E1 (microcin) immunity protein	NA|161aa|down_3|NZ_CP053044.1_1153579_1154062_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|145aa|down_4|NZ_CP053044.1_1154218_1154653_+	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin	NA|98aa|down_5|NZ_CP053044.1_1154645_1154939_+	PRK01777, PRK01777, RnfH family protein	NA|121aa|down_6|NZ_CP053044.1_1155145_1155508_-	PRK11548, PRK11548, outer membrane protein assembly factor BamE	NA|554aa|down_7|NZ_CP053044.1_1155621_1157283_-	PRK10869, PRK10869, recombination and repair protein; Provisional	NA|300aa|down_8|NZ_CP053044.1_1157370_1158270_-	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|204aa|down_9|NZ_CP053044.1_1158370_1158982_+	PRK14150, PRK14150, heat shock protein GrpE; Provisional
GCF_013171285.1_ASM1317128v1	NZ_CP053044	Proteus cibarius strain HNCF43W chromosome, complete genome	4	1250127-1250279	4	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	Orphan	TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,WYL,DinG,DEDDh,RT,TnsE_C	NA|194aa|up_7|NZ_CP053044.1_1242057_1242639_+,NA	NA|86aa|up_9|NZ_CP053044.1_1240330_1240588_-	PRK10850, PRK10850, phosphocarrier protein Hpr	NA|318aa|up_8|NZ_CP053044.1_1240919_1241873_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|194aa|up_7|NZ_CP053044.1_1242057_1242639_+	NA	NA|257aa|up_6|NZ_CP053044.1_1242752_1243523_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|343aa|up_5|NZ_CP053044.1_1243746_1244775_+	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|676aa|up_4|NZ_CP053044.1_1244830_1246858_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|395aa|up_3|NZ_CP053044.1_1247086_1248271_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|72aa|up_2|NZ_CP053044.1_1248437_1248653_+	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor	NA|147aa|up_1|NZ_CP053044.1_1248655_1249096_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|251aa|up_0|NZ_CP053044.1_1249279_1250032_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|473aa|down_0|NZ_CP053044.1_1250435_1251854_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|101aa|down_1|NZ_CP053044.1_1255112_1255415_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|349aa|down_2|NZ_CP053044.1_1256011_1257058_-	cd01142, TroA_e, Periplasmic binding protein TroA_e	NA|710aa|down_3|NZ_CP053044.1_1257070_1259200_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|260aa|down_4|NZ_CP053044.1_1259482_1260262_-	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|193aa|down_5|NZ_CP053044.1_1260258_1260837_-	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|760aa|down_6|NZ_CP053044.1_1260851_1263131_-	PRK15488, PRK15488, thiosulfate reductase PhsA; Provisional	NA|268aa|down_7|NZ_CP053044.1_1264004_1264808_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|259aa|down_8|NZ_CP053044.1_1264912_1265689_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|68aa|down_9|NZ_CP053044.1_1266354_1266558_+	pfam10547, P22_AR_N, P22_AR N-terminal domain
