assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013201545.1_ASM1320154v1	NZ_CP053746	Pseudomonas graminis strain PgKB30 chromosome, complete genome	1	364655-364755	1	CRISPRCasFinder	no	DinG	cas3,DinG,DEDDh,csa3	Type IV-A	GGCCCCTTCCCGGCTAAAGCCGGTCCCACTAA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA|258aa|up_9|NZ_CP053746.1_356111_356885_-,NA|166aa|up_6|NZ_CP053746.1_358719_359217_+,NA|202aa|up_4|NZ_CP053746.1_359746_360352_-,NA|74aa|down_9|NZ_CP053746.1_375990_376212_-	NA|258aa|up_9|NZ_CP053746.1_356111_356885_-	NA	NA|92aa|up_8|NZ_CP053746.1_356877_357153_-	COG3776, COG3776, Predicted membrane protein [Function unknown]	NA|234aa|up_7|NZ_CP053746.1_357774_358476_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|166aa|up_6|NZ_CP053746.1_358719_359217_+	NA	NA|158aa|up_5|NZ_CP053746.1_359227_359701_+	PRK00183, PRK00183, hypothetical protein; Provisional	NA|202aa|up_4|NZ_CP053746.1_359746_360352_-	NA	NA|162aa|up_3|NZ_CP053746.1_360466_360952_+	COG5608, COG5608, LEA14-like dessication related protein [Defense mechanisms]	NA|69aa|up_2|NZ_CP053746.1_360956_361163_+	PRK05590, PRK05590, hypothetical protein; Provisional	NA|215aa|up_1|NZ_CP053746.1_361285_361930_+	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional	NA|828aa|up_0|NZ_CP053746.1_362072_364556_+	pfam01804, Penicil_amidase, Penicillin amidase	NA|351aa|down_0|NZ_CP053746.1_365198_366251_+	TIGR04122, hypothetical_protein, putative exonuclease, DNA ligase-associated	NA|572aa|down_1|NZ_CP053746.1_366247_367963_+	PRK09247, PRK09247, ATP-dependent DNA ligase; Validated	NA|261aa|down_2|NZ_CP053746.1_368343_369126_+	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold	NA|243aa|down_3|NZ_CP053746.1_369205_369934_+	PRK15135, PRK15135, histidine ABC transporter permease HisQ	NA|237aa|down_4|NZ_CP053746.1_369930_370641_+	PRK15069, PRK15069, histidine ABC transporter permease HisM	NA|373aa|down_5|NZ_CP053746.1_370650_371769_+	cd06250, M14_PaAOTO_like, Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA)-like subfamily; subgroup includes Pseudomonas aeruginosa AotO	NA|255aa|down_6|NZ_CP053746.1_371781_372546_+	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]	NA|831aa|down_7|NZ_CP053746.1_372795_375288_+	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated	NA|219aa|down_8|NZ_CP053746.1_375284_375941_+	TIGR04123, hypothetical_protein, metallophosphoesterase, DNA ligase-associated	NA|74aa|down_9|NZ_CP053746.1_375990_376212_-	NA
GCF_013201545.1_ASM1320154v1	NZ_CP053746	Pseudomonas graminis strain PgKB30 chromosome, complete genome	2	2305753-2305826	2	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	AGCTGCAAGCTGCAAGAAAAAGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA,NA|1155aa|down_4|NZ_CP053746.1_2311100_2314565_-,NA|142aa|down_8|NZ_CP053746.1_2317316_2317742_-	NA|320aa|up_9|NZ_CP053746.1_2297144_2298104_+	PRK10266, PRK10266, curved DNA-binding protein	NA|99aa|up_8|NZ_CP053746.1_2298106_2298403_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|378aa|up_7|NZ_CP053746.1_2298917_2300051_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|567aa|up_6|NZ_CP053746.1_2300324_2302025_-	PRK13207, ureC, urease subunit alpha; Reviewed	NA|102aa|up_5|NZ_CP053746.1_2302166_2302472_-	PRK13203, ureB, urease subunit beta; Reviewed	NA|179aa|up_4|NZ_CP053746.1_2302468_2303005_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|184aa|up_3|NZ_CP053746.1_2303031_2303583_-	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|101aa|up_2|NZ_CP053746.1_2303644_2303947_-	PRK13241, ureA, urease subunit gamma; Provisional	NA|282aa|up_1|NZ_CP053746.1_2304133_2304979_-	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|233aa|up_0|NZ_CP053746.1_2305032_2305731_-	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|285aa|down_0|NZ_CP053746.1_2305885_2306740_-	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD	NA|360aa|down_1|NZ_CP053746.1_2306736_2307816_-	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC	NA|529aa|down_2|NZ_CP053746.1_2307815_2309402_-	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB	NA|422aa|down_3|NZ_CP053746.1_2309587_2310853_-	pfam13433, Peripla_BP_5, Periplasmic binding protein domain	NA|1155aa|down_4|NZ_CP053746.1_2311100_2314565_-	NA	NA|458aa|down_5|NZ_CP053746.1_2314829_2316203_-	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	NA|156aa|down_6|NZ_CP053746.1_2316286_2316754_-	pfam11162, DUF2946, Protein of unknown function (DUF2946)	NA|159aa|down_7|NZ_CP053746.1_2316789_2317266_-	pfam04314, PCuAC, Copper chaperone PCu(A)C	NA|142aa|down_8|NZ_CP053746.1_2317316_2317742_-	NA	NA|97aa|down_9|NZ_CP053746.1_2317830_2318121_-	TIGR02684, conserved_hypothetical_protein, probable addiction module antidote protein
GCF_013201545.1_ASM1320154v1	NZ_CP053746	Pseudomonas graminis strain PgKB30 chromosome, complete genome	3	3512776-3512883	3	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	GTGGGAGTGAGCTTGCTCAGGAAGACTGCATTTCAACCGC	40	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA|112aa|up_9|NZ_CP053746.1_3500175_3500511_-,NA|350aa|up_3|NZ_CP053746.1_3506734_3507784_+,NA|213aa|down_6|NZ_CP053746.1_3521834_3522473_+,NA|576aa|down_7|NZ_CP053746.1_3523333_3525061_-,NA|203aa|down_8|NZ_CP053746.1_3525416_3526025_-	NA|112aa|up_9|NZ_CP053746.1_3500175_3500511_-	NA	NA|326aa|up_8|NZ_CP053746.1_3501200_3502178_+	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins	NA|438aa|up_7|NZ_CP053746.1_3502268_3503582_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|216aa|up_6|NZ_CP053746.1_3503743_3504391_-	cd01015, CSHase, N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia	NA|273aa|up_5|NZ_CP053746.1_3504426_3505245_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|383aa|up_4|NZ_CP053746.1_3505241_3506390_-	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase	NA|350aa|up_3|NZ_CP053746.1_3506734_3507784_+	NA	NA|153aa|up_2|NZ_CP053746.1_3508012_3508471_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|173aa|up_1|NZ_CP053746.1_3508610_3509129_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|1194aa|up_0|NZ_CP053746.1_3509125_3512707_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|219aa|down_0|NZ_CP053746.1_3512936_3513593_-	pfam17938, TetR_C_29, Tetracyclin repressor-like, C-terminal domain	NA|448aa|down_1|NZ_CP053746.1_3513598_3514942_-	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|335aa|down_2|NZ_CP053746.1_3515078_3516083_-	cd05288, PGDH, Prostaglandin dehydrogenases	NA|254aa|down_3|NZ_CP053746.1_3516350_3517112_+	PRK06172, PRK06172, SDR family oxidoreductase	NA|491aa|down_4|NZ_CP053746.1_3517203_3518676_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|733aa|down_5|NZ_CP053746.1_3518873_3521072_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|213aa|down_6|NZ_CP053746.1_3521834_3522473_+	NA	NA|576aa|down_7|NZ_CP053746.1_3523333_3525061_-	NA	NA|203aa|down_8|NZ_CP053746.1_3525416_3526025_-	NA	NA|590aa|down_9|NZ_CP053746.1_3526464_3528234_-	pfam03235, DUF262, Protein of unknown function DUF262
GCF_013201545.1_ASM1320154v1	NZ_CP053746	Pseudomonas graminis strain PgKB30 chromosome, complete genome	4	3702865-3702951	4	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	GGGACCGGCTTCAGCCGGGAAGAG	24	1	1	3702889-3702927	NZ_CP053746.1_3703022-3703060	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA,NA|159aa|down_2|NZ_CP053746.1_3705307_3705784_+	NA|355aa|up_9|NZ_CP053746.1_3690599_3691664_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|962aa|up_8|NZ_CP053746.1_3691987_3694873_+	cd01948, EAL, EAL domain	NA|315aa|up_7|NZ_CP053746.1_3694894_3695839_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|336aa|up_6|NZ_CP053746.1_3695892_3696900_-	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	NA|283aa|up_5|NZ_CP053746.1_3696896_3697745_-	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	NA|434aa|up_4|NZ_CP053746.1_3697762_3699064_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|250aa|up_3|NZ_CP053746.1_3699149_3699899_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|306aa|up_2|NZ_CP053746.1_3700120_3701038_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|395aa|up_1|NZ_CP053746.1_3701160_3702345_+	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252)	NA|143aa|up_0|NZ_CP053746.1_3702423_3702852_+	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|408aa|down_0|NZ_CP053746.1_3703070_3704294_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|272aa|down_1|NZ_CP053746.1_3704253_3705069_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|159aa|down_2|NZ_CP053746.1_3705307_3705784_+	NA	NA|310aa|down_3|NZ_CP053746.1_3705773_3706703_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|352aa|down_4|NZ_CP053746.1_3706901_3707957_+	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional	NA|425aa|down_5|NZ_CP053746.1_3707953_3709228_+	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins	NA|397aa|down_6|NZ_CP053746.1_3709224_3710415_+	TIGR01789, lycopene_cyclase, lycopene cyclase	NA|497aa|down_7|NZ_CP053746.1_3710416_3711907_+	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|330aa|down_8|NZ_CP053746.1_3711903_3712893_+	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head	NA|182aa|down_9|NZ_CP053746.1_3712774_3713320_-	PLN02601, PLN02601, beta-carotene hydroxylase
GCF_013201545.1_ASM1320154v1	NZ_CP053746	Pseudomonas graminis strain PgKB30 chromosome, complete genome	5	5337538-5337647	5	CRISPRCasFinder	no		cas3,DinG,DEDDh,csa3	Orphan	GCAGTACGCGGTCGGCTTTGGCTTG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,DEDDh,csa3	NA,NA	NA|439aa|up_9|NZ_CP053746.1_5327331_5328648_+	PRK09228, PRK09228, guanine deaminase; Provisional	NA|255aa|up_8|NZ_CP053746.1_5328908_5329673_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|449aa|up_7|NZ_CP053746.1_5330031_5331378_+	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|209aa|up_6|NZ_CP053746.1_5331488_5332115_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|118aa|up_5|NZ_CP053746.1_5332215_5332569_-	COG2351, COG2351, Transthyretin-like protein [General function prediction only]	NA|309aa|up_4|NZ_CP053746.1_5332967_5333894_+	TIGR03212, uraD_N-term-dom, putative urate catabolism protein	NA|172aa|up_3|NZ_CP053746.1_5333890_5334406_+	TIGR03164, UHCUDC, OHCU decarboxylase	NA|332aa|up_2|NZ_CP053746.1_5334448_5335444_+	PRK13257, PRK13257, allantoicase; Provisional	NA|168aa|up_1|NZ_CP053746.1_5335613_5336117_+	PRK03606, PRK03606, ureidoglycolate lyase	NA|445aa|up_0|NZ_CP053746.1_5336164_5337499_+	COG3748, COG3748, Predicted membrane protein [Function unknown]	NA|452aa|down_0|NZ_CP053746.1_5337723_5339079_+	TIGR03173, pbuX, xanthine permease	NA|263aa|down_1|NZ_CP053746.1_5339436_5340225_+	COG3248, Tsx, Nucleoside-binding outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|253aa|down_2|NZ_CP053746.1_5340434_5341193_+	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|71aa|down_3|NZ_CP053746.1_5341304_5341517_-	PRK11869, PRK11869, 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	NA|203aa|down_4|NZ_CP053746.1_5341753_5342362_+	pfam08362, TetR_C_3, YcdC-like protein, C-terminal region	NA|133aa|down_5|NZ_CP053746.1_5342364_5342763_-	cd18161, REC_hyHK_blue-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinase/response regulators similar to Pseudomonas savastanoi blue-light-activated histidine kinase	NA|544aa|down_6|NZ_CP053746.1_5343305_5344937_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|294aa|down_7|NZ_CP053746.1_5345426_5346308_+	pfam03253, UT, Urea transporter	NA|289aa|down_8|NZ_CP053746.1_5346353_5347220_+	pfam00520, Ion_trans, Ion transport protein	NA|334aa|down_9|NZ_CP053746.1_5347354_5348356_+	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]
