assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013201705.1_ASM1320170v1	NZ_CP053837	Aliiarcobacter faecis strain CCUG 66484 chromosome, complete genome	1	436703-436934	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas9	cas2,cas1,cas9,DEDDh,csa3,PrimPol,cas3	 or Type II-C?,Type II-C, Type II-B,Type II-A,Type II-B	GTTTTAATCTACTCTCAAATCCCCATTTGATATAAT,GTTTTAATCTACTCTCAAATCCCCATTTGATATAAT,GTTTTAATCTACTCTCAAATCCCCATTTGATATAAT	36,36,36	0	0	NA	NA	NA:NA:NA	3,3,3	3	orTypeII-C?,TypeII-B,TypeII-C,TypeII-A,TypeII-B	cas2,cas1,cas9,DEDDh,csa3,PrimPol,cas3,PD-DExK	NA|158aa|up_7|NZ_CP053837.1_429208_429682_-,NA|241aa|down_6|NZ_CP053837.1_444355_445078_+,NA|108aa|down_7|NZ_CP053837.1_445074_445398_-	NA|279aa|up_9|NZ_CP053837.1_427699_428536_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|236aa|up_8|NZ_CP053837.1_428504_429212_-	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|158aa|up_7|NZ_CP053837.1_429208_429682_-	NA	NA|191aa|up_6|NZ_CP053837.1_429785_430358_+	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|499aa|up_5|NZ_CP053837.1_430388_431885_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|202aa|up_4|NZ_CP053837.1_431871_432477_-	pfam01844, HNH, HNH endonuclease	NA|355aa|up_3|NZ_CP053837.1_432477_433542_-	pfam18712, DUF5644, Family of unknown function (DUF5644)	NA|423aa|up_2|NZ_CP053837.1_433541_434810_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|293aa|up_1|NZ_CP053837.1_434912_435791_+	pfam00892, EamA, EamA-like transporter family	NA|266aa|up_0|NZ_CP053837.1_435801_436599_+	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	cas2|105aa|down_0|NZ_CP053837.1_436982_437297_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|248aa|down_1|NZ_CP053837.1_437462_438206_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1171aa|down_2|NZ_CP053837.1_438310_441823_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|157aa|down_3|NZ_CP053837.1_441950_442421_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|132aa|down_4|NZ_CP053837.1_442422_442818_+	PRK00202, nusB, transcription antitermination factor NusB	NA|233aa|down_5|NZ_CP053837.1_442819_443518_+	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|241aa|down_6|NZ_CP053837.1_444355_445078_+	NA	NA|108aa|down_7|NZ_CP053837.1_445074_445398_-	NA	NA|292aa|down_8|NZ_CP053837.1_445501_446377_+	pfam13186, SPASM, Iron-sulfur cluster-binding domain	NA|278aa|down_9|NZ_CP053837.1_446420_447254_+	pfam07264, EI24, Etoposide-induced protein 2
GCF_013201705.1_ASM1320170v1	NZ_CP053837	Aliiarcobacter faecis strain CCUG 66484 chromosome, complete genome	2	1641290-1641369	2	CRISPRCasFinder	no		cas2,cas1,cas9,DEDDh,csa3,PrimPol,cas3	Orphan	CCACCAGTTCCGCATCCACCACC	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,DEDDh,csa3,PrimPol,cas3,PD-DExK	NA|127aa|up_8|NZ_CP053837.1_1634465_1634846_-,NA|131aa|up_5|NZ_CP053837.1_1636570_1636963_+,NA|164aa|up_4|NZ_CP053837.1_1636971_1637463_-,NA	NA|109aa|up_9|NZ_CP053837.1_1634062_1634389_+	pfam12973, Cupin_7, ChrR Cupin-like domain	NA|127aa|up_8|NZ_CP053837.1_1634465_1634846_-	NA	NA|190aa|up_7|NZ_CP053837.1_1634847_1635417_-	COG1648, CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]	NA|341aa|up_6|NZ_CP053837.1_1635538_1636561_+	pfam17805, AsnC_trans_reg2, AsnC-like ligand binding domain	NA|131aa|up_5|NZ_CP053837.1_1636570_1636963_+	NA	NA|164aa|up_4|NZ_CP053837.1_1636971_1637463_-	NA	NA|167aa|up_3|NZ_CP053837.1_1637535_1638036_-	pfam00710, Asparaginase, Asparaginase, N-terminal	NA|469aa|up_2|NZ_CP053837.1_1638022_1639429_-	PRK12273, aspA, aspartate ammonia-lyase; Provisional	NA|234aa|up_1|NZ_CP053837.1_1639485_1640187_-	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|310aa|up_0|NZ_CP053837.1_1640179_1641109_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|326aa|down_0|NZ_CP053837.1_1641863_1642841_-	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF	NA|181aa|down_1|NZ_CP053837.1_1642844_1643387_-	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein	NA|425aa|down_2|NZ_CP053837.1_1643555_1644830_-	PRK04043, tolB, Tol-Pal system protein TolB	NA|244aa|down_3|NZ_CP053837.1_1644836_1645568_-	pfam13103, TonB_2, TonB C terminal	NA|130aa|down_4|NZ_CP053837.1_1645570_1645960_-	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	NA|188aa|down_5|NZ_CP053837.1_1645965_1646529_-	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]	NA|126aa|down_6|NZ_CP053837.1_1646535_1646913_-	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|465aa|down_7|NZ_CP053837.1_1646933_1648328_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|295aa|down_8|NZ_CP053837.1_1648349_1649234_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|506aa|down_9|NZ_CP053837.1_1649244_1650762_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated
GCF_013201705.1_ASM1320170v1	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	1	35847-35990	1	CRISPRCasFinder	no		PD-DExK,PrimPol	Orphan	TTCCTGCTCCTTTAGATGATCCAT	24	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas9,DEDDh,csa3,PrimPol,cas3,PD-DExK	NA|265aa|up_9|NZ_CP053838.1_23212_24007_-,NA|210aa|up_8|NZ_CP053838.1_24499_25129_-,NA|207aa|up_7|NZ_CP053838.1_25222_25843_-,NA|449aa|up_3|NZ_CP053838.1_30922_32269_-,NA|395aa|up_1|NZ_CP053838.1_33677_34862_-,NA|1133aa|down_2|NZ_CP053838.1_37838_41237_-,NA|139aa|down_3|NZ_CP053838.1_41543_41960_-,NA|59aa|down_6|NZ_CP053838.1_44428_44605_-,NA|120aa|down_7|NZ_CP053838.1_44604_44964_-,NA|430aa|down_9|NZ_CP053838.1_46438_47728_-	NA|265aa|up_9|NZ_CP053838.1_23212_24007_-	NA	NA|210aa|up_8|NZ_CP053838.1_24499_25129_-	NA	NA|207aa|up_7|NZ_CP053838.1_25222_25843_-	NA	NA|661aa|up_6|NZ_CP053838.1_25922_27905_-	pfam03235, DUF262, Protein of unknown function DUF262	NA|556aa|up_5|NZ_CP053838.1_27904_29572_-	pfam03235, DUF262, Protein of unknown function DUF262	NA|212aa|up_4|NZ_CP053838.1_30072_30708_-	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms]	NA|449aa|up_3|NZ_CP053838.1_30922_32269_-	NA	NA|281aa|up_2|NZ_CP053838.1_32808_33651_-	pfam11185, DUF2971, Protein of unknown function (DUF2971)	NA|395aa|up_1|NZ_CP053838.1_33677_34862_-	NA	NA|188aa|up_0|NZ_CP053838.1_35018_35582_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|404aa|down_0|NZ_CP053838.1_36169_37381_-	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases	NA|153aa|down_1|NZ_CP053838.1_37377_37836_-	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs)	NA|1133aa|down_2|NZ_CP053838.1_37838_41237_-	NA	NA|139aa|down_3|NZ_CP053838.1_41543_41960_-	NA	NA|84aa|down_4|NZ_CP053838.1_42298_42550_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|529aa|down_5|NZ_CP053838.1_42626_44213_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|59aa|down_6|NZ_CP053838.1_44428_44605_-	NA	NA|120aa|down_7|NZ_CP053838.1_44604_44964_-	NA	NA|486aa|down_8|NZ_CP053838.1_44977_46435_-	cd00519, Lipase_3, Lipase (class 3)	NA|430aa|down_9|NZ_CP053838.1_46438_47728_-	NA
