assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013201975.1_ASM1320197v1	NZ_CP053845	Campylobacter sp. CCUG 57310 chromosome, complete genome	1	349316-349579	1,1	CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	Type III-A,Type III-C,Type III-D,Type III-B	GTTTCAATCCCCTAGATCGGGTCAAATTTGTTCAAAT,GTTTCAATCCCCTAGATCGGGTCAAATTTGTTCAAAT	37,37	0	0	NA	NA	NA:NA	3,2	3	TypeIII-A,TypeIII-C,TypeIII-D,TypeIII-B	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	NA|240aa|up_3|NZ_CP053845.1_345699_346419_+,NA|212aa|up_1|NZ_CP053845.1_346715_347351_+,NA|74aa|down_2|NZ_CP053845.1_353139_353361_+	NA|136aa|up_9|NZ_CP053845.1_336546_336954_+	COG3787, COG3787, Uncharacterized protein conserved in bacteria [Function unknown]	NA|687aa|up_8|NZ_CP053845.1_337113_339174_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|400aa|up_7|NZ_CP053845.1_339964_341164_+	pfam13173, AAA_14, AAA domain	NA|528aa|up_6|NZ_CP053845.1_341187_342771_+	pfam14491, DUF4435, Protein of unknown function (DUF4435)	NA|394aa|up_5|NZ_CP053845.1_343366_344548_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|379aa|up_4|NZ_CP053845.1_344556_345693_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|240aa|up_3|NZ_CP053845.1_345699_346419_+	NA	NA|69aa|up_2|NZ_CP053845.1_346512_346719_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|212aa|up_1|NZ_CP053845.1_346715_347351_+	NA	NA|558aa|up_0|NZ_CP053845.1_347369_349043_+	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	cas2|92aa|down_0|NZ_CP053845.1_350025_350301_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|745aa|down_1|NZ_CP053845.1_350300_352535_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|74aa|down_2|NZ_CP053845.1_353139_353361_+	NA	cas6|279aa|down_3|NZ_CP053845.1_353341_354178_+	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas10|130aa|down_4|NZ_CP053845.1_354164_354554_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	NA|450aa|down_5|NZ_CP053845.1_354634_355984_-	cd17246, RMtype1_S_SonII-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Shewanella oneidensis MR-1 S subunit (S	NA|878aa|down_6|NZ_CP053845.1_355986_358620_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|339aa|down_7|NZ_CP053845.1_358640_359657_-	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas10|400aa|down_8|NZ_CP053845.1_359705_360905_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|135aa|down_9|NZ_CP053845.1_360901_361306_+	pfam03750, Csm2_III-A, Csm2 Type III-A
GCF_013201975.1_ASM1320197v1	NZ_CP053845	Campylobacter sp. CCUG 57310 chromosome, complete genome	2	973448-973643	2	CRISPRCasFinder	no		cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	Orphan	GCAACGCCTCTGAAAACACCGTAACAATAAA	31	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	NA,NA|164aa|down_4|NZ_CP053845.1_981896_982388_+	NA|372aa|up_9|NZ_CP053845.1_960246_961362_+	PRK05031, PRK05031, tRNA (uracil-5-)-methyltransferase; Validated	NA|404aa|up_8|NZ_CP053845.1_961737_962949_+	PRK08526, PRK08526, threonine dehydratase; Provisional	NA|231aa|up_7|NZ_CP053845.1_963089_963782_+	pfam14014, DUF4230, Protein of unknown function (DUF4230)	NA|445aa|up_6|NZ_CP053845.1_963850_965185_-	PRK12310, PRK12310, hydroxylamine reductase; Provisional	NA|230aa|up_5|NZ_CP053845.1_965394_966084_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|425aa|up_4|NZ_CP053845.1_967622_968897_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|144aa|up_3|NZ_CP053845.1_969080_969512_+	COG2044, COG2044, Predicted peroxiredoxins [General function prediction only]	NA|339aa|up_2|NZ_CP053845.1_969697_970714_+	PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	NA|376aa|up_1|NZ_CP053845.1_970863_971991_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|243aa|up_0|NZ_CP053845.1_971983_972712_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|193aa|down_0|NZ_CP053845.1_975307_975886_+	TIGR02162, Cytochrome_c-type_protein_TorC, trimethylamine-N-oxide reductase c-type cytochrome TorC	NA|853aa|down_1|NZ_CP053845.1_975998_978557_+	TIGR00509, Trimethylamine-N-oxide_reductase_1, molybdopterin guanine dinucleotide-containing S/N-oxide reductases	NA|153aa|down_2|NZ_CP053845.1_978631_979090_-	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|852aa|down_3|NZ_CP053845.1_979225_981781_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|164aa|down_4|NZ_CP053845.1_981896_982388_+	NA	NA|287aa|down_5|NZ_CP053845.1_983663_984524_+	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed	NA|386aa|down_6|NZ_CP053845.1_986431_987589_+	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion]	NA|573aa|down_7|NZ_CP053845.1_987591_989310_+	pfam00374, NiFeSe_Hases, Nickel-dependent hydrogenase	NA|228aa|down_8|NZ_CP053845.1_989319_990003_+	TIGR02125, CytB-hydogenase, Ni/Fe-hydrogenase, b-type cytochrome subunit	NA|180aa|down_9|NZ_CP053845.1_990006_990546_+	cd06062, H2MP_MemB-H2up, Endopeptidases belonging to membrane-bound hydrogenases group
GCF_013201975.1_ASM1320197v1	NZ_CP053845	Campylobacter sp. CCUG 57310 chromosome, complete genome	3	1052765-1052873	3	CRISPRCasFinder	no		cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	Orphan	AAAACACCGTAACAATAAACGGAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	NA|188aa|up_9|NZ_CP053845.1_1041931_1042495_-,NA|117aa|down_7|NZ_CP053845.1_1064747_1065098_+,NA|207aa|down_8|NZ_CP053845.1_1065100_1065721_-,NA|144aa|down_9|NZ_CP053845.1_1065902_1066334_-	NA|188aa|up_9|NZ_CP053845.1_1041931_1042495_-	NA	NA|422aa|up_8|NZ_CP053845.1_1042738_1044004_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|386aa|up_7|NZ_CP053845.1_1044004_1045162_+	cd00887, MoeA, MoeA family	NA|270aa|up_6|NZ_CP053845.1_1045336_1046146_+	PRK08515, flgA, flagellar basal body P-ring formation protein FlgA	NA|198aa|up_5|NZ_CP053845.1_1046142_1046736_+	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|159aa|up_4|NZ_CP053845.1_1046732_1047209_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|200aa|up_3|NZ_CP053845.1_1047209_1047809_+	PRK00698, tmk, thymidylate kinase; Validated	NA|412aa|up_2|NZ_CP053845.1_1047801_1049037_+	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|612aa|up_1|NZ_CP053845.1_1049029_1050865_+	PRK05354, PRK05354, biosynthetic arginine decarboxylase	NA|388aa|up_0|NZ_CP053845.1_1050885_1052049_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|319aa|down_0|NZ_CP053845.1_1054634_1055591_-	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional	NA|154aa|down_1|NZ_CP053845.1_1055590_1056052_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|563aa|down_2|NZ_CP053845.1_1056061_1057750_-	PRK08527, PRK08527, acetolactate synthase large subunit	NA|1086aa|down_3|NZ_CP053845.1_1058089_1061347_+	cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases	NA|235aa|down_4|NZ_CP053845.1_1061391_1062096_-	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|460aa|down_5|NZ_CP053845.1_1062167_1063547_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|399aa|down_6|NZ_CP053845.1_1063546_1064743_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|117aa|down_7|NZ_CP053845.1_1064747_1065098_+	NA	NA|207aa|down_8|NZ_CP053845.1_1065100_1065721_-	NA	NA|144aa|down_9|NZ_CP053845.1_1065902_1066334_-	NA
GCF_013201975.1_ASM1320197v1	NZ_CP053845	Campylobacter sp. CCUG 57310 chromosome, complete genome	4	1568095-1569213	4,1,5,2,3	CRISPRCasFinder,CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no	WYL,csx20,csx1,csm3gr7,csx19,csx10gr5,cas10,cas2,cas1,cas6	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	Type III-A,Type III-C,Type III-D,Type III-B	GTTTCAATCCCCTAAAACGGGGAAGCTCGAGCGAAAT,GTTTCAATCCCCTAAAACGGGGAAGCTCGAGCGAAATN,GTTTCAATCCCCTAAAACGGGGAAGCTCGAGCGAAAT,GTTTCAATCCCCTAAAACGGGGAAGCTCGAGCGAAAT,GTTTCAATCCCCTAAAACGGGGAAGCTCGAGCGAAAT	37,38,37,37,37	0	0	NA	NA	NA:NA:NA:NA:NA	12,14,12,6,6	14	TypeIII-A,TypeIII-C,TypeIII-D,TypeIII-B	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	csx20|125aa|up_9|NZ_CP053845.1_1557846_1558221_-,NA|263aa|up_7|NZ_CP053845.1_1559498_1560287_-,csx10gr5|461aa|up_3|NZ_CP053845.1_1563880_1565263_-,NA|110aa|up_0|NZ_CP053845.1_1567498_1567828_-,NA|76aa|down_6|NZ_CP053845.1_1574171_1574399_-,NA|65aa|down_7|NZ_CP053845.1_1574450_1574645_-,NA|58aa|down_8|NZ_CP053845.1_1574686_1574860_-,NA|148aa|down_9|NZ_CP053845.1_1574890_1575334_-	csx20|125aa|up_9|NZ_CP053845.1_1557846_1558221_-	NA	csx1|418aa|up_8|NZ_CP053845.1_1558227_1559481_-	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	NA|263aa|up_7|NZ_CP053845.1_1559498_1560287_-	NA	csm3gr7|616aa|up_6|NZ_CP053845.1_1560290_1562138_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|141aa|up_5|NZ_CP053845.1_1562134_1562557_-	TIGR04423, predicted_protein, CRISPR type III-associated protein, TIGR04423 family	csm3gr7|446aa|up_4|NZ_CP053845.1_1562543_1563881_-	pfam03787, RAMPs, RAMP superfamily	csx10gr5|461aa|up_3|NZ_CP053845.1_1563880_1565263_-	NA	csm3gr7|181aa|up_2|NZ_CP053845.1_1565265_1565808_-	pfam03787, RAMPs, RAMP superfamily	cas10|506aa|up_1|NZ_CP053845.1_1565804_1567322_-	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms]	NA|110aa|up_0|NZ_CP053845.1_1567498_1567828_-	NA	cas2|91aa|down_0|NZ_CP053845.1_1569642_1569915_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|730aa|down_1|NZ_CP053845.1_1569911_1572101_-	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas6|88aa|down_2|NZ_CP053845.1_1572144_1572408_-	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	cas6|182aa|down_3|NZ_CP053845.1_1572410_1572956_-	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	NA|92aa|down_4|NZ_CP053845.1_1573312_1573588_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|77aa|down_5|NZ_CP053845.1_1573584_1573815_-	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only]	NA|76aa|down_6|NZ_CP053845.1_1574171_1574399_-	NA	NA|65aa|down_7|NZ_CP053845.1_1574450_1574645_-	NA	NA|58aa|down_8|NZ_CP053845.1_1574686_1574860_-	NA	NA|148aa|down_9|NZ_CP053845.1_1574890_1575334_-	NA
GCF_013201975.1_ASM1320197v1	NZ_CP053847	Campylobacter sp. CCUG 57310 plasmid pCORI-2, complete sequence	1	243-388	1	CRISPRCasFinder	no			Orphan	AAAAAGAAGTTTTTGTAAGTGAAAAA	26	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,DEDDh,WYL,csx20,csx1,csx19,csx10gr5,csa3	NA,NA|120aa|down_1|NZ_CP053847.1_1908_2268_+,NA|172aa|down_2|NZ_CP053847.1_2296_2812_-,NA|81aa|down_3|NZ_CP053847.1_3198_3441_+,NA|91aa|down_6|NZ_CP053847.1_4736_5009_+,NA|88aa|down_7|NZ_CP053847.1_5031_5295_+,NA|86aa|down_8|NZ_CP053847.1_5458_5716_-,NA|147aa|down_9|NZ_CP053847.1_6501_6942_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|330aa|down_0|NZ_CP053847.1_390_1380_+	pfam01051, Rep_3, Initiator Replication protein	NA|120aa|down_1|NZ_CP053847.1_1908_2268_+	NA	NA|172aa|down_2|NZ_CP053847.1_2296_2812_-	NA	NA|81aa|down_3|NZ_CP053847.1_3198_3441_+	NA	NA|119aa|down_4|NZ_CP053847.1_3533_3890_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|188aa|down_5|NZ_CP053847.1_4173_4737_+	cd02042, ParAB_family, partition proteins ParAB family	NA|91aa|down_6|NZ_CP053847.1_4736_5009_+	NA	NA|88aa|down_7|NZ_CP053847.1_5031_5295_+	NA	NA|86aa|down_8|NZ_CP053847.1_5458_5716_-	NA	NA|147aa|down_9|NZ_CP053847.1_6501_6942_+	NA
