assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013256075.1_ASM1325607v1	NZ_CP053900	Proteus mirabilis strain YPM35 plasmid pJPM35-2, complete sequence	1	21725-21867	1	PILER-CR	no			Orphan	CCTAGTTCCCAACTATTTTGTC	22	0	0	NA	NA	NA	2	2	Orphan	c2c9_V-U4,DEDDh,WYL,cas3,DinG,c2c10_CAS-V-U3,csa3,RT	NA|72aa|up_6|NZ_CP053900.1_15303_15519_-,NA|62aa|up_0|NZ_CP053900.1_21339_21525_-,NA|120aa|down_4|NZ_CP053900.1_24621_24981_-,NA|140aa|down_5|NZ_CP053900.1_25330_25750_+,NA|98aa|down_6|NZ_CP053900.1_25770_26064_+,NA|184aa|down_8|NZ_CP053900.1_27423_27975_+,NA|90aa|down_9|NZ_CP053900.1_28000_28270_+	NA|235aa|up_9|NZ_CP053900.1_11624_12329_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|206aa|up_8|NZ_CP053900.1_12563_13181_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|350aa|up_7|NZ_CP053900.1_13905_14955_-	PRK14453, PRK14453, chloramphenicol/florfenicol resistance protein; Provisional	NA|72aa|up_6|NZ_CP053900.1_15303_15519_-	NA	NA|235aa|up_5|NZ_CP053900.1_15577_16282_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|252aa|up_4|NZ_CP053900.1_17347_18103_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|280aa|up_3|NZ_CP053900.1_18252_19092_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|387aa|up_2|NZ_CP053900.1_19037_20198_+	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|252aa|up_1|NZ_CP053900.1_20525_21281_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|62aa|up_0|NZ_CP053900.1_21339_21525_-	NA	NA|191aa|down_0|NZ_CP053900.1_21922_22495_+	cd01829, SGNH_hydrolase_peri2, SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases	NA|170aa|down_1|NZ_CP053900.1_22498_23008_+	pfam10881, DUF2726, Protein of unknown function (DUF2726)	NA|118aa|down_2|NZ_CP053900.1_23033_23387_-	pfam10784, Plasmid_stab_B, Plasmid stability protein	NA|333aa|down_3|NZ_CP053900.1_23386_24385_-	pfam06406, StbA, StbA protein	NA|120aa|down_4|NZ_CP053900.1_24621_24981_-	NA	NA|140aa|down_5|NZ_CP053900.1_25330_25750_+	NA	NA|98aa|down_6|NZ_CP053900.1_25770_26064_+	NA	NA|175aa|down_7|NZ_CP053900.1_26796_27321_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|184aa|down_8|NZ_CP053900.1_27423_27975_+	NA	NA|90aa|down_9|NZ_CP053900.1_28000_28270_+	NA
GCF_013256075.1_ASM1325607v1	NZ_CP053898	Proteus mirabilis strain YPM35 chromosome, complete genome	1	184642-184737	1	CRISPRCasFinder	no		c2c9_V-U4,DEDDh,WYL,cas3,DinG,c2c10_CAS-V-U3,csa3,RT	Orphan	ATAGCTTAGAAAAATAAGTACTAA	24	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,DEDDh,WYL,cas3,DinG,c2c10_CAS-V-U3,csa3,RT	NA,NA|83aa|down_1|NZ_CP053898.1_185058_185307_-	NA|113aa|up_9|NZ_CP053898.1_173051_173390_+	PRK11027, PRK11027, hypothetical protein; Provisional	NA|511aa|up_8|NZ_CP053898.1_173437_174970_-	PRK09862, PRK09862, ATP-dependent protease	NA|34aa|up_7|NZ_CP053898.1_175415_175517_+	PRK10424, PRK10424, ilv operon leader peptide	NA|550aa|up_6|NZ_CP053898.1_175646_177296_+	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|93aa|up_5|NZ_CP053898.1_177292_177571_+	PRK11152, ilvM, acetolactate synthase 2 small subunit	NA|309aa|up_4|NZ_CP053898.1_177581_178508_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|617aa|up_3|NZ_CP053898.1_178580_180431_+	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|525aa|up_2|NZ_CP053898.1_180434_182009_+	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|296aa|up_1|NZ_CP053898.1_181994_182882_-	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|492aa|up_0|NZ_CP053898.1_183054_184530_+	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|90aa|down_0|NZ_CP053898.1_184788_185058_-	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|83aa|down_1|NZ_CP053898.1_185058_185307_-	NA	NA|674aa|down_2|NZ_CP053898.1_185479_187501_+	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional	NA|503aa|down_3|NZ_CP053898.1_187575_189084_-	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|433aa|down_4|NZ_CP053898.1_189087_190386_-	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|109aa|down_5|NZ_CP053898.1_190505_190832_+	PRK09381, trxA, thioredoxin TrxA	NA|420aa|down_6|NZ_CP053898.1_191393_192653_+	PRK09376, rho, transcription termination factor Rho; Provisional	NA|364aa|down_7|NZ_CP053898.1_193047_194139_+	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA|353aa|down_8|NZ_CP053898.1_194162_195221_+	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein	NA|377aa|down_9|NZ_CP053898.1_195350_196481_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
GCF_013256075.1_ASM1325607v1	NZ_CP053898	Proteus mirabilis strain YPM35 chromosome, complete genome	2	2889239-2889381	2	CRISPRCasFinder	no		c2c9_V-U4,DEDDh,WYL,cas3,DinG,c2c10_CAS-V-U3,csa3,RT	Orphan	GGTGATATCAATTTCACAGGTGG	23	0	0	NA	NA	NA	2	2	Orphan	c2c9_V-U4,DEDDh,WYL,cas3,DinG,c2c10_CAS-V-U3,csa3,RT	NA|240aa|up_7|NZ_CP053898.1_2879851_2880571_-,NA|49aa|up_1|NZ_CP053898.1_2887176_2887323_+,NA|76aa|up_0|NZ_CP053898.1_2887323_2887551_+,NA	NA|300aa|up_9|NZ_CP053898.1_2877779_2878679_+	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|325aa|up_8|NZ_CP053898.1_2878880_2879855_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|240aa|up_7|NZ_CP053898.1_2879851_2880571_-	NA	NA|245aa|up_6|NZ_CP053898.1_2880794_2881529_-	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|208aa|up_5|NZ_CP053898.1_2881619_2882243_-	PRK09304, PRK09304, arginine exporter ArgO	NA|287aa|up_4|NZ_CP053898.1_2882411_2883272_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|124aa|up_3|NZ_CP053898.1_2883363_2883735_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|866aa|up_2|NZ_CP053898.1_2883905_2886503_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|49aa|up_1|NZ_CP053898.1_2887176_2887323_+	NA	NA|76aa|up_0|NZ_CP053898.1_2887323_2887551_+	NA	NA|476aa|down_0|NZ_CP053898.1_2901828_2903256_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|624aa|down_1|NZ_CP053898.1_2903457_2905329_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|889aa|down_2|NZ_CP053898.1_2905341_2908008_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|262aa|down_3|NZ_CP053898.1_2908171_2908957_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|181aa|down_4|NZ_CP053898.1_2909268_2909811_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|148aa|down_5|NZ_CP053898.1_2910021_2910465_+	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|368aa|down_6|NZ_CP053898.1_2910563_2911667_+	PRK10436, PRK10436, hypothetical protein; Provisional	NA|400aa|down_7|NZ_CP053898.1_2911663_2912863_+	PRK10573, PRK10573, protein transport protein HofC	NA|205aa|down_8|NZ_CP053898.1_2913140_2913755_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|251aa|down_9|NZ_CP053898.1_2913757_2914510_+	PRK05287, PRK05287, cell division protein ZapD
GCF_013256075.1_ASM1325607v1	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	1	60633-61178	1	CRISPRCasFinder	no			Orphan	ATACTGCATCAACGACGACCTTT	23	0	0	NA	NA	NA	8	8	Orphan	c2c9_V-U4,DEDDh,WYL,cas3,DinG,c2c10_CAS-V-U3,csa3,RT	NA|351aa|up_6|NZ_CP053899.1_55943_56996_-,NA|119aa|up_5|NZ_CP053899.1_57159_57516_-,NA|142aa|up_4|NZ_CP053899.1_57532_57958_-,NA|98aa|up_3|NZ_CP053899.1_57954_58248_-,NA|76aa|up_1|NZ_CP053899.1_59342_59570_-,NA|164aa|down_0|NZ_CP053899.1_61744_62236_-,NA|140aa|down_4|NZ_CP053899.1_65023_65443_+,NA|153aa|down_5|NZ_CP053899.1_65778_66237_-,NA|198aa|down_7|NZ_CP053899.1_67261_67855_+,NA|187aa|down_8|NZ_CP053899.1_67811_68372_+,NA|280aa|down_9|NZ_CP053899.1_68371_69211_+	NA|349aa|up_9|NZ_CP053899.1_52643_53690_-	COG1475, Spo0J, Stage 0 sporulation protein J (antagonist of Soj) containing ParB-like nuclease domain [Transcription]	NA|421aa|up_8|NZ_CP053899.1_54041_55304_-	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|139aa|up_7|NZ_CP053899.1_55303_55720_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|351aa|up_6|NZ_CP053899.1_55943_56996_-	NA	NA|119aa|up_5|NZ_CP053899.1_57159_57516_-	NA	NA|142aa|up_4|NZ_CP053899.1_57532_57958_-	NA	NA|98aa|up_3|NZ_CP053899.1_57954_58248_-	NA	NA|279aa|up_2|NZ_CP053899.1_58247_59084_-	PRK02951, PRK02951, DNA replication terminus site-binding protein; Provisional	NA|76aa|up_1|NZ_CP053899.1_59342_59570_-	NA	NA|279aa|up_0|NZ_CP053899.1_59572_60409_-	pfam01051, Rep_3, Initiator Replication protein	NA|164aa|down_0|NZ_CP053899.1_61744_62236_-	NA	NA|127aa|down_1|NZ_CP053899.1_62246_62627_-	pfam10784, Plasmid_stab_B, Plasmid stability protein	NA|320aa|down_2|NZ_CP053899.1_62631_63591_-	pfam06406, StbA, StbA protein	NA|271aa|down_3|NZ_CP053899.1_63887_64700_-	pfam13708, DUF4942, Domain of unknown function (DUF4942)	NA|140aa|down_4|NZ_CP053899.1_65023_65443_+	NA	NA|153aa|down_5|NZ_CP053899.1_65778_66237_-	NA	NA|183aa|down_6|NZ_CP053899.1_66723_67272_+	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins	NA|198aa|down_7|NZ_CP053899.1_67261_67855_+	NA	NA|187aa|down_8|NZ_CP053899.1_67811_68372_+	NA	NA|280aa|down_9|NZ_CP053899.1_68371_69211_+	NA
