assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013267315.1_ASM1326731v1	NZ_CP053980	Bacillus thuringiensis strain FDAARGOS_795 chromosome, complete genome	1	162527-162629	1	CRISPRCasFinder	no	csa3	csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	Type I-A	AAGTTTAGGTTTCTTTTGAGAATGT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	NA|77aa|up_5|NZ_CP053980.1_157186_157417_+,NA|218aa|down_0|NZ_CP053980.1_163268_163922_-,NA|58aa|down_1|NZ_CP053980.1_164026_164200_+,NA|105aa|down_8|NZ_CP053980.1_171173_171488_+	NA|514aa|up_9|NZ_CP053980.1_151308_152850_-	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed	NA|264aa|up_8|NZ_CP053980.1_153065_153857_+	COG2162, NhoA, Arylamine N-acetyltransferase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|596aa|up_7|NZ_CP053980.1_153973_155761_+	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|378aa|up_6|NZ_CP053980.1_155796_156930_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|77aa|up_5|NZ_CP053980.1_157186_157417_+	NA	NA|411aa|up_4|NZ_CP053980.1_157527_158760_-	cd17475, MFS_MT3072_like, Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily	NA|284aa|up_3|NZ_CP053980.1_158845_159697_+	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|170aa|up_2|NZ_CP053980.1_159689_160199_+	pfam13079, DUF3916, Protein of unknown function (DUF3916)	NA|226aa|up_1|NZ_CP053980.1_160292_160970_+	cd06259, YdcF-like, YdcF-like	NA|315aa|up_0|NZ_CP053980.1_161019_161964_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|218aa|down_0|NZ_CP053980.1_163268_163922_-	NA	NA|58aa|down_1|NZ_CP053980.1_164026_164200_+	NA	NA|540aa|down_2|NZ_CP053980.1_164528_166148_-	pfam01494, FAD_binding_3, FAD binding domain	csa3|115aa|down_3|NZ_CP053980.1_166615_166960_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|333aa|down_4|NZ_CP053980.1_166978_167977_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|107aa|down_5|NZ_CP053980.1_168087_168408_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|down_6|NZ_CP053980.1_168377_169283_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|489aa|down_7|NZ_CP053980.1_169476_170943_+	PRK00029, PRK00029, YdiU family protein	NA|105aa|down_8|NZ_CP053980.1_171173_171488_+	NA	NA|366aa|down_9|NZ_CP053980.1_171692_172790_+	sd00006, TPR, Tetratricopeptide repeat
GCF_013267315.1_ASM1326731v1	NZ_CP053980	Bacillus thuringiensis strain FDAARGOS_795 chromosome, complete genome	2	3234083-3234191	2	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	Orphan	TGTATGATTACCTTCCGCATGAGAA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	NA|58aa|up_7|NZ_CP053980.1_3228020_3228194_-,NA|124aa|up_3|NZ_CP053980.1_3230620_3230992_+,NA	NA|415aa|up_9|NZ_CP053980.1_3224779_3226024_+	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease    domain [General function prediction only]	NA|609aa|up_8|NZ_CP053980.1_3226074_3227901_+	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|58aa|up_7|NZ_CP053980.1_3228020_3228194_-	NA	NA|298aa|up_6|NZ_CP053980.1_3228423_3229317_-	pfam13743, Thioredoxin_5, Thioredoxin	NA|133aa|up_5|NZ_CP053980.1_3229316_3229715_-	cd14772, TrHb2_Bs-trHb-like_O, Truncated hemoglobins, group 2 (O); Bacillus subtilis TrHb like	NA|193aa|up_4|NZ_CP053980.1_3229895_3230474_-	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|124aa|up_3|NZ_CP053980.1_3230620_3230992_+	NA	NA|213aa|up_2|NZ_CP053980.1_3231022_3231661_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|266aa|up_1|NZ_CP053980.1_3231679_3232477_+	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|298aa|up_0|NZ_CP053980.1_3232492_3233386_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|247aa|down_0|NZ_CP053980.1_3234963_3235704_-	PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional	NA|387aa|down_1|NZ_CP053980.1_3235778_3236939_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|312aa|down_2|NZ_CP053980.1_3237081_3238017_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|253aa|down_3|NZ_CP053980.1_3238023_3238782_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|282aa|down_4|NZ_CP053980.1_3238918_3239764_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|296aa|down_5|NZ_CP053980.1_3239886_3240774_-	pfam18573, BclA_C, BclA C-terminal domain	NA|367aa|down_6|NZ_CP053980.1_3240939_3242040_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|230aa|down_7|NZ_CP053980.1_3242191_3242881_+	pfam08242, Methyltransf_12, Methyltransferase domain	NA|229aa|down_8|NZ_CP053980.1_3242877_3243564_+	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family	NA|227aa|down_9|NZ_CP053980.1_3243576_3244257_+	pfam13712, Glyco_tranf_2_5, Glycosyltransferase like family
GCF_013267315.1_ASM1326731v1	NZ_CP053980	Bacillus thuringiensis strain FDAARGOS_795 chromosome, complete genome	3	4824994-4825168	1	PILER-CR	no		csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	Orphan	ATTTCGGAATGAATGTTCATTCCTCTC	27	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	NA,NA	NA|234aa|up_9|NZ_CP053980.1_4811404_4812106_-	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|228aa|up_8|NZ_CP053980.1_4812122_4812806_-	cd06561, AlkD_like, A new structural DNA glycosylase	NA|87aa|up_7|NZ_CP053980.1_4813171_4813432_-	PRK10811, rne, ribonuclease E; Reviewed	NA|276aa|up_6|NZ_CP053980.1_4813649_4814477_+	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins	NA|221aa|up_5|NZ_CP053980.1_4814632_4815295_+	pfam12952, DUF3841, Domain of unknown function (DUF3841)	NA|224aa|up_4|NZ_CP053980.1_4815405_4816077_+	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family	NA|658aa|up_3|NZ_CP053980.1_4816136_4818110_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|542aa|up_2|NZ_CP053980.1_4818626_4820252_-	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|283aa|up_1|NZ_CP053980.1_4820629_4821478_-	PRK06761, PRK06761, hypothetical protein; Provisional	NA|1039aa|up_0|NZ_CP053980.1_4821815_4824932_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|189aa|down_0|NZ_CP053980.1_4825185_4825752_-	pfam16295, TetR_C_10, Tetracycline repressor, C-terminal all-alpha domain	NA|386aa|down_1|NZ_CP053980.1_4826021_4827179_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|430aa|down_2|NZ_CP053980.1_4827466_4828756_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|367aa|down_3|NZ_CP053980.1_4828772_4829873_-	PRK06545, PRK06545, prephenate dehydrogenase; Validated	NA|367aa|down_4|NZ_CP053980.1_4829865_4830966_-	PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated	NA|391aa|down_5|NZ_CP053980.1_4830984_4832157_-	PRK12463, PRK12463, chorismate synthase; Reviewed	NA|359aa|down_6|NZ_CP053980.1_4832441_4833518_-	PRK12595, PRK12595, bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed	NA|1171aa|down_7|NZ_CP053980.1_4834349_4837862_-	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|146aa|down_8|NZ_CP053980.1_4838012_4838450_+	pfam10710, DUF2512, Protein of unknown function (DUF2512)	NA|177aa|down_9|NZ_CP053980.1_4838598_4839129_-	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases
GCF_013267315.1_ASM1326731v1	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	1	70998-71135	1	CRISPRCasFinder	no			Orphan	CTAAACCTGTACAAAAGCAAGAAG	24	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	NA|137aa|up_9|NZ_CP053979.1_41834_42245_+,NA|194aa|up_3|NZ_CP053979.1_56194_56776_+,NA|139aa|up_2|NZ_CP053979.1_56855_57272_+,NA|133aa|down_1|NZ_CP053979.1_72664_73063_+,NA|204aa|down_2|NZ_CP053979.1_73140_73752_+,NA|247aa|down_3|NZ_CP053979.1_73859_74600_+,NA|139aa|down_4|NZ_CP053979.1_74619_75036_+,NA|127aa|down_5|NZ_CP053979.1_75041_75422_+,NA|120aa|down_6|NZ_CP053979.1_75440_75800_+,NA|237aa|down_7|NZ_CP053979.1_75811_76522_+,NA|86aa|down_8|NZ_CP053979.1_76846_77104_+,NA|108aa|down_9|NZ_CP053979.1_77124_77448_+	NA|137aa|up_9|NZ_CP053979.1_41834_42245_+	NA	NA|396aa|up_8|NZ_CP053979.1_42481_43669_+	smart00475, 53EXOc, 5'-3' exonuclease	NA|423aa|up_7|NZ_CP053979.1_43878_45147_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|2561aa|up_6|NZ_CP053979.1_45786_53469_+	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|471aa|up_5|NZ_CP053979.1_53891_55304_+	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown]	NA|237aa|up_4|NZ_CP053979.1_55464_56175_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|194aa|up_3|NZ_CP053979.1_56194_56776_+	NA	NA|139aa|up_2|NZ_CP053979.1_56855_57272_+	NA	NA|353aa|up_1|NZ_CP053979.1_57524_58583_+	pfam16403, DUF5011, Domain of unknown function (DUF5011)	NA|3527aa|up_0|NZ_CP053979.1_59161_69742_+	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain	NA|283aa|down_0|NZ_CP053979.1_71649_72498_+	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|133aa|down_1|NZ_CP053979.1_72664_73063_+	NA	NA|204aa|down_2|NZ_CP053979.1_73140_73752_+	NA	NA|247aa|down_3|NZ_CP053979.1_73859_74600_+	NA	NA|139aa|down_4|NZ_CP053979.1_74619_75036_+	NA	NA|127aa|down_5|NZ_CP053979.1_75041_75422_+	NA	NA|120aa|down_6|NZ_CP053979.1_75440_75800_+	NA	NA|237aa|down_7|NZ_CP053979.1_75811_76522_+	NA	NA|86aa|down_8|NZ_CP053979.1_76846_77104_+	NA	NA|108aa|down_9|NZ_CP053979.1_77124_77448_+	NA
GCF_013267315.1_ASM1326731v1	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	2	264168-264628	2	CRISPRCasFinder	no			Orphan	GATATCATTGAAGACGAAGATGA	23	3	5	264326-264344|264326-264344|264368-264386|264587-264605|264587-264605	NZ_CP053979.1_104000-104018|NZ_CP053980.1_1155885-1155867|NZ_CP053979.1_104000-104018|NZ_CP053980.1_2916348-2916330|NZ_CP053980.1_4880655-4880637	NA	9	9	Orphan	csa3,WYL,DEDDh,cas14j,cas3,c2c9_V-U4,cas14k,DinG	NA|69aa|up_9|NZ_CP053979.1_257904_258111_+,NA|62aa|up_8|NZ_CP053979.1_258097_258283_+,NA|59aa|up_7|NZ_CP053979.1_258292_258469_+,NA|65aa|up_6|NZ_CP053979.1_258485_258680_+,NA|339aa|up_5|NZ_CP053979.1_258711_259728_+,NA|120aa|up_2|NZ_CP053979.1_261779_262139_+,NA|178aa|down_0|NZ_CP053979.1_264759_265293_+,NA|186aa|down_1|NZ_CP053979.1_265408_265966_+,NA|164aa|down_2|NZ_CP053979.1_265969_266461_+,NA|226aa|down_3|NZ_CP053979.1_266478_267156_+,NA|207aa|down_4|NZ_CP053979.1_267178_267799_+,NA|161aa|down_5|NZ_CP053979.1_267822_268305_+,NA|160aa|down_6|NZ_CP053979.1_268327_268807_+,NA|173aa|down_7|NZ_CP053979.1_269107_269626_+,NA|176aa|down_8|NZ_CP053979.1_269660_270188_+,NA|246aa|down_9|NZ_CP053979.1_270230_270968_+	NA|69aa|up_9|NZ_CP053979.1_257904_258111_+	NA	NA|62aa|up_8|NZ_CP053979.1_258097_258283_+	NA	NA|59aa|up_7|NZ_CP053979.1_258292_258469_+	NA	NA|65aa|up_6|NZ_CP053979.1_258485_258680_+	NA	NA|339aa|up_5|NZ_CP053979.1_258711_259728_+	NA	NA|418aa|up_4|NZ_CP053979.1_259715_260969_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|263aa|up_3|NZ_CP053979.1_260975_261764_+	cd17792, CtkA, serine/threonine-protein kinase CtkA and similar proteins	NA|120aa|up_2|NZ_CP053979.1_261779_262139_+	NA	NA|242aa|up_1|NZ_CP053979.1_262169_262895_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|316aa|up_0|NZ_CP053979.1_262993_263941_+	PRK13480, PRK13480, 3'-5' exoribonuclease YhaM; Provisional	NA|178aa|down_0|NZ_CP053979.1_264759_265293_+	NA	NA|186aa|down_1|NZ_CP053979.1_265408_265966_+	NA	NA|164aa|down_2|NZ_CP053979.1_265969_266461_+	NA	NA|226aa|down_3|NZ_CP053979.1_266478_267156_+	NA	NA|207aa|down_4|NZ_CP053979.1_267178_267799_+	NA	NA|161aa|down_5|NZ_CP053979.1_267822_268305_+	NA	NA|160aa|down_6|NZ_CP053979.1_268327_268807_+	NA	NA|173aa|down_7|NZ_CP053979.1_269107_269626_+	NA	NA|176aa|down_8|NZ_CP053979.1_269660_270188_+	NA	NA|246aa|down_9|NZ_CP053979.1_270230_270968_+	NA
