assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	1	234715-234844	1	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	CTTTTTGAGGGAATTCAGCCACTTTCTTGGCGCGCCAGTGGTCCACTC	48	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA|84aa|up_9|NZ_CP053988.1_221108_221360_-,NA|810aa|down_4|NZ_CP053988.1_239434_241864_-	NA|84aa|up_9|NZ_CP053988.1_221108_221360_-	NA	NA|414aa|up_8|NZ_CP053988.1_221379_222621_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|151aa|up_7|NZ_CP053988.1_222648_223101_-	PRK07308, PRK07308, flavodoxin; Validated	NA|702aa|up_6|NZ_CP053988.1_223298_225404_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|922aa|up_5|NZ_CP053988.1_225586_228352_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|349aa|up_4|NZ_CP053988.1_228437_229484_-	PRK09354, recA, recombinase A; Provisional	NA|385aa|up_3|NZ_CP053988.1_229580_230735_-	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|234aa|up_2|NZ_CP053988.1_230944_231646_-	pfam09529, Intg_mem_TP0381, Integral membrane protein (intg_mem_TP0381)	NA|478aa|up_1|NZ_CP053988.1_231849_233283_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|395aa|up_0|NZ_CP053988.1_233481_234666_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|329aa|down_0|NZ_CP053988.1_234928_235915_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|437aa|down_1|NZ_CP053988.1_235945_237256_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|374aa|down_2|NZ_CP053988.1_237337_238459_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|283aa|down_3|NZ_CP053988.1_238589_239438_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|810aa|down_4|NZ_CP053988.1_239434_241864_-	NA	NA|201aa|down_5|NZ_CP053988.1_242261_242864_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|840aa|down_6|NZ_CP053988.1_243001_245521_-	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|139aa|down_7|NZ_CP053988.1_245556_245973_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|376aa|down_8|NZ_CP053988.1_245965_247093_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|112aa|down_9|NZ_CP053988.1_247214_247550_-	pfam08866, DUF1831, Putative amino acid metabolism
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	2	638169-638278	2	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	AGTGGTCCACTCTTCAAAGTGGGCCACT	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA|570aa|up_9|NZ_CP053988.1_628330_630040_-,NA|52aa|up_8|NZ_CP053988.1_630111_630267_-,NA|172aa|up_4|NZ_CP053988.1_633091_633607_+,NA	NA|570aa|up_9|NZ_CP053988.1_628330_630040_-	NA	NA|52aa|up_8|NZ_CP053988.1_630111_630267_-	NA	NA|203aa|up_7|NZ_CP053988.1_630517_631126_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|296aa|up_6|NZ_CP053988.1_631130_632018_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|265aa|up_5|NZ_CP053988.1_632014_632809_+	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|172aa|up_4|NZ_CP053988.1_633091_633607_+	NA	NA|272aa|up_3|NZ_CP053988.1_634070_634886_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|131aa|up_2|NZ_CP053988.1_635604_635997_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|148aa|up_1|NZ_CP053988.1_636010_636454_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|450aa|up_0|NZ_CP053988.1_636693_638043_+	pfam03486, HI0933_like, HI0933-like protein	NA|305aa|down_0|NZ_CP053988.1_638325_639240_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|219aa|down_1|NZ_CP053988.1_639254_639911_-	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|254aa|down_2|NZ_CP053988.1_639930_640692_-	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|273aa|down_3|NZ_CP053988.1_640693_641512_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|287aa|down_4|NZ_CP053988.1_641511_642372_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|370aa|down_5|NZ_CP053988.1_642533_643643_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|515aa|down_6|NZ_CP053988.1_644021_645566_-	cd09160, PLDc_SMU_988_like_2, Putative catalytic domain, repeat 2, of Streptococcus mutans uncharacterized protein SMU_988 and similar proteins	NA|211aa|down_7|NZ_CP053988.1_645561_646194_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|669aa|down_8|NZ_CP053988.1_646361_648368_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|204aa|down_9|NZ_CP053988.1_648457_649069_-	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	3	1281855-1281942	3	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	GAAAAGGGTGGTTTGCGCCGAAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA|343aa|up_9|NZ_CP053988.1_1270138_1271167_+,NA|135aa|up_8|NZ_CP053988.1_1271519_1271924_-,NA|586aa|down_6|NZ_CP053988.1_1288371_1290129_+,NA|358aa|down_7|NZ_CP053988.1_1290253_1291327_+	NA|343aa|up_9|NZ_CP053988.1_1270138_1271167_+	NA	NA|135aa|up_8|NZ_CP053988.1_1271519_1271924_-	NA	NA|103aa|up_7|NZ_CP053988.1_1272112_1272421_-	cd00215, PTS_IIA_lac, PTS_IIA, PTS system, lactose/cellobiose specific IIA subunit	NA|101aa|up_6|NZ_CP053988.1_1272422_1272725_-	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|429aa|up_5|NZ_CP053988.1_1272743_1274030_-	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]	NA|443aa|up_4|NZ_CP053988.1_1275187_1276516_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|291aa|up_3|NZ_CP053988.1_1276621_1277494_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|274aa|up_2|NZ_CP053988.1_1277490_1278312_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|347aa|up_1|NZ_CP053988.1_1278335_1279376_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|781aa|up_0|NZ_CP053988.1_1279368_1281711_+	cd06595, GH31_u1, glycosyl hydrolase family 31 (GH31); uncharacterized subgroup	NA|482aa|down_0|NZ_CP053988.1_1282110_1283556_-	PRK09034, PRK09034, aspartate kinase; Reviewed	NA|399aa|down_1|NZ_CP053988.1_1283718_1284915_+	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|295aa|down_2|NZ_CP053988.1_1284927_1285812_+	PRK01212, PRK01212, homoserine kinase; Provisional	NA|196aa|down_3|NZ_CP053988.1_1285857_1286445_-	PRK10671, copA, copper-exporting P-type ATPase CopA	NA|340aa|down_4|NZ_CP053988.1_1286470_1287490_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|228aa|down_5|NZ_CP053988.1_1287636_1288320_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|586aa|down_6|NZ_CP053988.1_1288371_1290129_+	NA	NA|358aa|down_7|NZ_CP053988.1_1290253_1291327_+	NA	NA|348aa|down_8|NZ_CP053988.1_1291358_1292402_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|232aa|down_9|NZ_CP053988.1_1292398_1293094_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	4	1571600-1571707	4	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	AGAGTGGACCACTAGCTCCTGGAGAA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA,NA|379aa|down_6|NZ_CP053988.1_1578345_1579482_+	NA|315aa|up_9|NZ_CP053988.1_1560640_1561585_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|241aa|up_8|NZ_CP053988.1_1561585_1562308_+	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase	NA|412aa|up_7|NZ_CP053988.1_1562344_1563580_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|165aa|up_6|NZ_CP053988.1_1563582_1564077_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|145aa|up_5|NZ_CP053988.1_1564115_1564550_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|464aa|up_4|NZ_CP053988.1_1564551_1565943_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|288aa|up_3|NZ_CP053988.1_1565946_1566810_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|261aa|up_2|NZ_CP053988.1_1566806_1567589_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|546aa|up_1|NZ_CP053988.1_1568275_1569913_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|395aa|up_0|NZ_CP053988.1_1570327_1571512_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|324aa|down_0|NZ_CP053988.1_1571779_1572751_-	pfam08378, NERD, Nuclease-related domain	NA|379aa|down_1|NZ_CP053988.1_1573161_1574298_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|395aa|down_2|NZ_CP053988.1_1574441_1575626_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|346aa|down_3|NZ_CP053988.1_1576273_1577311_+	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|95aa|down_4|NZ_CP053988.1_1577535_1577820_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|139aa|down_5|NZ_CP053988.1_1577932_1578349_+	pfam10552, ORF6C, ORF6C domain	NA|379aa|down_6|NZ_CP053988.1_1578345_1579482_+	NA	NA|208aa|down_7|NZ_CP053988.1_1579766_1580390_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|257aa|down_8|NZ_CP053988.1_1580643_1581414_-	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA	NA|266aa|down_9|NZ_CP053988.1_1581410_1582208_-	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	5	1575720-1575829	5	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	AAAGCCCCGAAAAGCCGTGAGCCAGTGG	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA,NA|379aa|down_3|NZ_CP053988.1_1578345_1579482_+	NA|165aa|up_9|NZ_CP053988.1_1563582_1564077_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|145aa|up_8|NZ_CP053988.1_1564115_1564550_+	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|464aa|up_7|NZ_CP053988.1_1564551_1565943_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|288aa|up_6|NZ_CP053988.1_1565946_1566810_+	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|261aa|up_5|NZ_CP053988.1_1566806_1567589_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|546aa|up_4|NZ_CP053988.1_1568275_1569913_+	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|395aa|up_3|NZ_CP053988.1_1570327_1571512_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|324aa|up_2|NZ_CP053988.1_1571779_1572751_-	pfam08378, NERD, Nuclease-related domain	NA|379aa|up_1|NZ_CP053988.1_1573161_1574298_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|395aa|up_0|NZ_CP053988.1_1574441_1575626_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|346aa|down_0|NZ_CP053988.1_1576273_1577311_+	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|95aa|down_1|NZ_CP053988.1_1577535_1577820_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|139aa|down_2|NZ_CP053988.1_1577932_1578349_+	pfam10552, ORF6C, ORF6C domain	NA|379aa|down_3|NZ_CP053988.1_1578345_1579482_+	NA	NA|208aa|down_4|NZ_CP053988.1_1579766_1580390_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|257aa|down_5|NZ_CP053988.1_1580643_1581414_-	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA	NA|266aa|down_6|NZ_CP053988.1_1581410_1582208_-	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing	NA|418aa|down_7|NZ_CP053988.1_1583231_1584485_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|388aa|down_8|NZ_CP053988.1_1584510_1585674_+	PRK13808, PRK13808, adenylate kinase; Provisional	NA|491aa|down_9|NZ_CP053988.1_1585678_1587151_+	PRK06347, PRK06347, 1,4-beta-N-acetylmuramoylhydrolase
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	6	1588689-1588801	6	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	GCCTTTTTCTGGGTAGCCAGTGGTCCACTCTT	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA|379aa|up_7|NZ_CP053988.1_1578345_1579482_+,NA|66aa|down_4|NZ_CP053988.1_1595733_1595931_+,NA|77aa|down_6|NZ_CP053988.1_1596283_1596514_+	NA|95aa|up_9|NZ_CP053988.1_1577535_1577820_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|139aa|up_8|NZ_CP053988.1_1577932_1578349_+	pfam10552, ORF6C, ORF6C domain	NA|379aa|up_7|NZ_CP053988.1_1578345_1579482_+	NA	NA|208aa|up_6|NZ_CP053988.1_1579766_1580390_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|257aa|up_5|NZ_CP053988.1_1580643_1581414_-	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA	NA|266aa|up_4|NZ_CP053988.1_1581410_1582208_-	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing	NA|418aa|up_3|NZ_CP053988.1_1583231_1584485_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|388aa|up_2|NZ_CP053988.1_1584510_1585674_+	PRK13808, PRK13808, adenylate kinase; Provisional	NA|491aa|up_1|NZ_CP053988.1_1585678_1587151_+	PRK06347, PRK06347, 1,4-beta-N-acetylmuramoylhydrolase	NA|401aa|up_0|NZ_CP053988.1_1587320_1588523_+	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|395aa|down_0|NZ_CP053988.1_1588888_1590073_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|182aa|down_1|NZ_CP053988.1_1590369_1590915_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|234aa|down_2|NZ_CP053988.1_1591047_1591749_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|1122aa|down_3|NZ_CP053988.1_1592080_1595446_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|66aa|down_4|NZ_CP053988.1_1595733_1595931_+	NA	NA|81aa|down_5|NZ_CP053988.1_1595970_1596213_+	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|77aa|down_6|NZ_CP053988.1_1596283_1596514_+	NA	NA|76aa|down_7|NZ_CP053988.1_1596518_1596746_+	pfam16938, Phage_holin_Dp1, Putative phage holin Dp-1	NA|220aa|down_8|NZ_CP053988.1_1596720_1597380_+	pfam08230, CW_7, CW_7 repeat	NA|102aa|down_9|NZ_CP053988.1_1597626_1597932_+	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	7	1590206-1590330	7	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	CCACTCTCCAGAGTGGACCACTAGCTCACGCCATTTCGGGGCA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA|379aa|up_8|NZ_CP053988.1_1578345_1579482_+,NA|66aa|down_3|NZ_CP053988.1_1595733_1595931_+,NA|77aa|down_5|NZ_CP053988.1_1596283_1596514_+	NA|139aa|up_9|NZ_CP053988.1_1577932_1578349_+	pfam10552, ORF6C, ORF6C domain	NA|379aa|up_8|NZ_CP053988.1_1578345_1579482_+	NA	NA|208aa|up_7|NZ_CP053988.1_1579766_1580390_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|257aa|up_6|NZ_CP053988.1_1580643_1581414_-	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA	NA|266aa|up_5|NZ_CP053988.1_1581410_1582208_-	cd16935, HATPase_AgrC-ComD-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Staphylococcus aureus AgrC and Streptococcus pneumoniae ComD which are involved in quorum sensing	NA|418aa|up_4|NZ_CP053988.1_1583231_1584485_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|388aa|up_3|NZ_CP053988.1_1584510_1585674_+	PRK13808, PRK13808, adenylate kinase; Provisional	NA|491aa|up_2|NZ_CP053988.1_1585678_1587151_+	PRK06347, PRK06347, 1,4-beta-N-acetylmuramoylhydrolase	NA|401aa|up_1|NZ_CP053988.1_1587320_1588523_+	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|395aa|up_0|NZ_CP053988.1_1588888_1590073_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|182aa|down_0|NZ_CP053988.1_1590369_1590915_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|234aa|down_1|NZ_CP053988.1_1591047_1591749_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|1122aa|down_2|NZ_CP053988.1_1592080_1595446_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|66aa|down_3|NZ_CP053988.1_1595733_1595931_+	NA	NA|81aa|down_4|NZ_CP053988.1_1595970_1596213_+	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|77aa|down_5|NZ_CP053988.1_1596283_1596514_+	NA	NA|76aa|down_6|NZ_CP053988.1_1596518_1596746_+	pfam16938, Phage_holin_Dp1, Putative phage holin Dp-1	NA|220aa|down_7|NZ_CP053988.1_1596720_1597380_+	pfam08230, CW_7, CW_7 repeat	NA|102aa|down_8|NZ_CP053988.1_1597626_1597932_+	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)	NA|400aa|down_9|NZ_CP053988.1_1597915_1599115_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters
GCF_013267415.1_ASM1326741v1	NZ_CP053988	Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome	8	1608449-1608559	8	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3	Orphan	CCACTCCGCCGAGTGGACCACTAGCTCGG	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3	NA|51aa|up_0|NZ_CP053988.1_1608046_1608199_-,NA|269aa|down_2|NZ_CP053988.1_1610761_1611568_-	NA|80aa|up_9|NZ_CP053988.1_1599971_1600211_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|197aa|up_8|NZ_CP053988.1_1600271_1600862_+	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP	NA|56aa|up_7|NZ_CP053988.1_1600873_1601041_+	pfam10031, DUF2273, Small integral membrane protein (DUF2273)	NA|309aa|up_6|NZ_CP053988.1_1601062_1601989_+	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|175aa|up_5|NZ_CP053988.1_1602168_1602693_+	pfam16157, DUF4865, Domain of unknown function (DUF4865)	NA|289aa|up_4|NZ_CP053988.1_1602761_1603628_-	TIGR00676, 510-methylenetetrahydrofolate_reductase	NA|751aa|up_3|NZ_CP053988.1_1603633_1605886_-	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|314aa|up_2|NZ_CP053988.1_1606014_1606956_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|188aa|up_1|NZ_CP053988.1_1607381_1607945_-	PRK00529, PRK00529, elongation factor P; Validated	NA|51aa|up_0|NZ_CP053988.1_1608046_1608199_-	NA	NA|395aa|down_0|NZ_CP053988.1_1608624_1609809_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|229aa|down_1|NZ_CP053988.1_1610058_1610745_-	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family	NA|269aa|down_2|NZ_CP053988.1_1610761_1611568_-	NA	NA|162aa|down_3|NZ_CP053988.1_1611598_1612084_-	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|513aa|down_4|NZ_CP053988.1_1612157_1613696_-	COG2461, COG2461, Uncharacterized conserved protein [Function unknown]	NA|82aa|down_5|NZ_CP053988.1_1613685_1613931_-	pfam08984, DUF1858, Domain of unknown function (DUF1858)	NA|158aa|down_6|NZ_CP053988.1_1613923_1614397_-	pfam12821, ThrE_2, Threonine/Serine exporter, ThrE	NA|257aa|down_7|NZ_CP053988.1_1614402_1615173_-	pfam06738, ThrE, Putative threonine/serine exporter	NA|231aa|down_8|NZ_CP053988.1_1615378_1616071_+	TIGR00719, Probable_L-serine_dehydratase_beta_chain, L-serine dehydratase, iron-sulfur-dependent, beta subunit	NA|295aa|down_9|NZ_CP053988.1_1616112_1616997_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit
