assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	1	9440-11486	1,1	CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas9	cas2,cas1,cas9,cas3,PrimPol,DEDDh	 Type II-B,Type II-C,Type II-A, or Type II-C?,Type II-B	GTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAAC,GTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAAC	47,47	1	1	11410-11439	NZ_CP054010.1_621209-621238	NA:NA	26,25	26	TypeII-B,TypeII-C,TypeII-A,orTypeII-C?,TypeII-B	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA,NA|206aa|down_4|NZ_CP054010.1_20085_20703_-,NA|144aa|down_6|NZ_CP054010.1_23239_23671_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|387aa|up_4|NZ_CP054010.1_560_1721_-	pfam07396, Porin_O_P, Phosphate-selective porin O and P	NA|264aa|up_3|NZ_CP054010.1_1873_2665_-	cd03397, PAP2_acid_phosphatase, PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases	NA|1009aa|up_2|NZ_CP054010.1_2829_5856_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|627aa|up_1|NZ_CP054010.1_6042_7923_-	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|196aa|up_0|NZ_CP054010.1_8554_9142_-	COG3059, COG3059, Predicted membrane protein [Function unknown]	cas2|114aa|down_0|NZ_CP054010.1_11676_12018_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|311aa|down_1|NZ_CP054010.1_12025_12958_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1495aa|down_2|NZ_CP054010.1_12969_17454_-	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	NA|473aa|down_3|NZ_CP054010.1_17763_19182_-	pfam03929, PepSY_TM, PepSY-associated TM region	NA|206aa|down_4|NZ_CP054010.1_20085_20703_-	NA	NA|744aa|down_5|NZ_CP054010.1_20889_23121_-	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|144aa|down_6|NZ_CP054010.1_23239_23671_-	NA	NA|122aa|down_7|NZ_CP054010.1_23980_24346_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|413aa|down_8|NZ_CP054010.1_24404_25643_+	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|180aa|down_9|NZ_CP054010.1_26609_27149_-	cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	2	506582-506681	2	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	TAAACGAGTTAATACTATCAAGCAACTTGT	30	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|272aa|up_6|NZ_CP054010.1_499521_500337_+,NA|172aa|up_4|NZ_CP054010.1_502019_502535_+,NA|82aa|down_3|NZ_CP054010.1_513217_513463_+	NA|297aa|up_9|NZ_CP054010.1_495953_496844_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|178aa|up_8|NZ_CP054010.1_496978_497512_-	PRK12703, PRK12703, tRNA 2'-O-methylase; Reviewed	NA|593aa|up_7|NZ_CP054010.1_497601_499380_-	COG5016, COG5016, Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]	NA|272aa|up_6|NZ_CP054010.1_499521_500337_+	NA	NA|278aa|up_5|NZ_CP054010.1_501077_501911_+	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family	NA|172aa|up_4|NZ_CP054010.1_502019_502535_+	NA	NA|182aa|up_3|NZ_CP054010.1_502531_503077_+	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR	NA|159aa|up_2|NZ_CP054010.1_503073_503550_+	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR	NA|170aa|up_1|NZ_CP054010.1_503645_504155_+	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|541aa|up_0|NZ_CP054010.1_504797_506420_-	cd17340, MFS_MFSD1, Major facilitator superfamily domain-containing protein 1	NA|720aa|down_0|NZ_CP054010.1_506716_508876_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|644aa|down_1|NZ_CP054010.1_508878_510810_-	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|537aa|down_2|NZ_CP054010.1_510810_512421_-	PRK05380, pyrG, CTP synthetase; Validated	NA|82aa|down_3|NZ_CP054010.1_513217_513463_+	NA	NA|242aa|down_4|NZ_CP054010.1_513459_514185_+	cd05350, SDR_c6, classical (c) SDR, subgroup 6	NA|271aa|down_5|NZ_CP054010.1_514392_515205_+	pfam03929, PepSY_TM, PepSY-associated TM region	NA|627aa|down_6|NZ_CP054010.1_515724_517605_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|540aa|down_7|NZ_CP054010.1_518245_519865_+	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|534aa|down_8|NZ_CP054010.1_519901_521503_+	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|919aa|down_9|NZ_CP054010.1_521518_524275_+	cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	3	870239-870379	3	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	CTTGTTCCTATGTTACTTTGTCTTTTATTTACCCTGTCTACAAGCAACTTGTT	53	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|69aa|up_8|NZ_CP054010.1_858714_858921_+,NA|86aa|up_7|NZ_CP054010.1_858976_859234_+,NA|165aa|up_6|NZ_CP054010.1_859634_860129_+,NA|151aa|up_4|NZ_CP054010.1_860928_861381_+,NA|90aa|down_1|NZ_CP054010.1_872723_872993_-,NA|282aa|down_4|NZ_CP054010.1_876289_877135_+	NA|736aa|up_9|NZ_CP054010.1_855615_857823_+	pfam03030, H_PPase, Inorganic H+ pyrophosphatase	NA|69aa|up_8|NZ_CP054010.1_858714_858921_+	NA	NA|86aa|up_7|NZ_CP054010.1_858976_859234_+	NA	NA|165aa|up_6|NZ_CP054010.1_859634_860129_+	NA	NA|203aa|up_5|NZ_CP054010.1_860312_860921_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|151aa|up_4|NZ_CP054010.1_860928_861381_+	NA	NA|401aa|up_3|NZ_CP054010.1_861381_862584_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|173aa|up_2|NZ_CP054010.1_862587_863106_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|1043aa|up_1|NZ_CP054010.1_864735_867864_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|538aa|up_0|NZ_CP054010.1_867886_869500_+	pfam07980, SusD_RagB, SusD family	NA|592aa|down_0|NZ_CP054010.1_870527_872303_+	TIGR03296, hypothetical_protein, M6 family metalloprotease domain	NA|90aa|down_1|NZ_CP054010.1_872723_872993_-	NA	NA|273aa|down_2|NZ_CP054010.1_873262_874081_+	pfam04383, KilA-N, KilA-N domain	NA|566aa|down_3|NZ_CP054010.1_874351_876049_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|282aa|down_4|NZ_CP054010.1_876289_877135_+	NA	NA|217aa|down_5|NZ_CP054010.1_877347_877998_-	pfam14903, WG_beta_rep, WG containing repeat	NA|1064aa|down_6|NZ_CP054010.1_878881_882073_-	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|602aa|down_7|NZ_CP054010.1_882287_884093_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|353aa|down_8|NZ_CP054010.1_884113_885172_-	pfam14274, DUF4361, Domain of unknown function (DUF4361)	NA|677aa|down_9|NZ_CP054010.1_885195_887226_-	pfam07980, SusD_RagB, SusD family
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	4	878463-878584	4	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	CCAAAGGAGGGGAGCTGCCTAACGGATAAAGA	32	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|90aa|up_4|NZ_CP054010.1_872723_872993_-,NA|282aa|up_1|NZ_CP054010.1_876289_877135_+,NA|773aa|down_6|NZ_CP054010.1_892762_895081_-	NA|401aa|up_9|NZ_CP054010.1_861381_862584_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|173aa|up_8|NZ_CP054010.1_862587_863106_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|1043aa|up_7|NZ_CP054010.1_864735_867864_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|538aa|up_6|NZ_CP054010.1_867886_869500_+	pfam07980, SusD_RagB, SusD family	NA|592aa|up_5|NZ_CP054010.1_870527_872303_+	TIGR03296, hypothetical_protein, M6 family metalloprotease domain	NA|90aa|up_4|NZ_CP054010.1_872723_872993_-	NA	NA|273aa|up_3|NZ_CP054010.1_873262_874081_+	pfam04383, KilA-N, KilA-N domain	NA|566aa|up_2|NZ_CP054010.1_874351_876049_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|282aa|up_1|NZ_CP054010.1_876289_877135_+	NA	NA|217aa|up_0|NZ_CP054010.1_877347_877998_-	pfam14903, WG_beta_rep, WG containing repeat	NA|1064aa|down_0|NZ_CP054010.1_878881_882073_-	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|602aa|down_1|NZ_CP054010.1_882287_884093_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|353aa|down_2|NZ_CP054010.1_884113_885172_-	pfam14274, DUF4361, Domain of unknown function (DUF4361)	NA|677aa|down_3|NZ_CP054010.1_885195_887226_-	pfam07980, SusD_RagB, SusD family	NA|1037aa|down_4|NZ_CP054010.1_887255_890366_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|500aa|down_5|NZ_CP054010.1_890401_891901_-	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins	NA|773aa|down_6|NZ_CP054010.1_892762_895081_-	NA	NA|509aa|down_7|NZ_CP054010.1_895090_896617_-	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism]	NA|1266aa|down_8|NZ_CP054010.1_897477_901275_-	cd06596, GH31_CPE1046, Clostridium CPE1046-like	NA|218aa|down_9|NZ_CP054010.1_901999_902653_+	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	5	892085-892203	5	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	CAAAGAGAGACAGAGTAACATAAGAACAAGG	31	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|282aa|up_7|NZ_CP054010.1_876289_877135_+,NA|773aa|down_0|NZ_CP054010.1_892762_895081_-,NA|144aa|down_4|NZ_CP054010.1_903849_904281_+	NA|273aa|up_9|NZ_CP054010.1_873262_874081_+	pfam04383, KilA-N, KilA-N domain	NA|566aa|up_8|NZ_CP054010.1_874351_876049_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|282aa|up_7|NZ_CP054010.1_876289_877135_+	NA	NA|217aa|up_6|NZ_CP054010.1_877347_877998_-	pfam14903, WG_beta_rep, WG containing repeat	NA|1064aa|up_5|NZ_CP054010.1_878881_882073_-	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|602aa|up_4|NZ_CP054010.1_882287_884093_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|353aa|up_3|NZ_CP054010.1_884113_885172_-	pfam14274, DUF4361, Domain of unknown function (DUF4361)	NA|677aa|up_2|NZ_CP054010.1_885195_887226_-	pfam07980, SusD_RagB, SusD family	NA|1037aa|up_1|NZ_CP054010.1_887255_890366_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|500aa|up_0|NZ_CP054010.1_890401_891901_-	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins	NA|773aa|down_0|NZ_CP054010.1_892762_895081_-	NA	NA|509aa|down_1|NZ_CP054010.1_895090_896617_-	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism]	NA|1266aa|down_2|NZ_CP054010.1_897477_901275_-	cd06596, GH31_CPE1046, Clostridium CPE1046-like	NA|218aa|down_3|NZ_CP054010.1_901999_902653_+	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain	NA|144aa|down_4|NZ_CP054010.1_903849_904281_+	NA	NA|355aa|down_5|NZ_CP054010.1_905074_906139_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|426aa|down_6|NZ_CP054010.1_906141_907419_-	pfam14135, DUF4302, Domain of unknown function (DUF4302)	NA|296aa|down_7|NZ_CP054010.1_907555_908443_-	TIGR04549, LP_HExxH_w_tonB, substrate import-associated zinc metallohydrolase lipoprotein	NA|528aa|down_8|NZ_CP054010.1_908454_910038_-	pfam14322, SusD-like_3, Starch-binding associating with outer membrane	NA|1105aa|down_9|NZ_CP054010.1_910049_913364_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	6	897347-897436	6	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	CATTTCACGCCCCTCCCTTTGGGGGAGGGGT	31	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|282aa|up_9|NZ_CP054010.1_876289_877135_+,NA|773aa|up_1|NZ_CP054010.1_892762_895081_-,NA|144aa|down_2|NZ_CP054010.1_903849_904281_+	NA|282aa|up_9|NZ_CP054010.1_876289_877135_+	NA	NA|217aa|up_8|NZ_CP054010.1_877347_877998_-	pfam14903, WG_beta_rep, WG containing repeat	NA|1064aa|up_7|NZ_CP054010.1_878881_882073_-	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|602aa|up_6|NZ_CP054010.1_882287_884093_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|353aa|up_5|NZ_CP054010.1_884113_885172_-	pfam14274, DUF4361, Domain of unknown function (DUF4361)	NA|677aa|up_4|NZ_CP054010.1_885195_887226_-	pfam07980, SusD_RagB, SusD family	NA|1037aa|up_3|NZ_CP054010.1_887255_890366_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|500aa|up_2|NZ_CP054010.1_890401_891901_-	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins	NA|773aa|up_1|NZ_CP054010.1_892762_895081_-	NA	NA|509aa|up_0|NZ_CP054010.1_895090_896617_-	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism]	NA|1266aa|down_0|NZ_CP054010.1_897477_901275_-	cd06596, GH31_CPE1046, Clostridium CPE1046-like	NA|218aa|down_1|NZ_CP054010.1_901999_902653_+	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain	NA|144aa|down_2|NZ_CP054010.1_903849_904281_+	NA	NA|355aa|down_3|NZ_CP054010.1_905074_906139_-	cd14948, BACON, Bacteroidetes-Associated Carbohydrate-binding (putative) Often N-terminal (BACON) domain	NA|426aa|down_4|NZ_CP054010.1_906141_907419_-	pfam14135, DUF4302, Domain of unknown function (DUF4302)	NA|296aa|down_5|NZ_CP054010.1_907555_908443_-	TIGR04549, LP_HExxH_w_tonB, substrate import-associated zinc metallohydrolase lipoprotein	NA|528aa|down_6|NZ_CP054010.1_908454_910038_-	pfam14322, SusD-like_3, Starch-binding associating with outer membrane	NA|1105aa|down_7|NZ_CP054010.1_910049_913364_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|781aa|down_8|NZ_CP054010.1_913843_916186_-	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family	NA|445aa|down_9|NZ_CP054010.1_917541_918876_+	cd03394, PAP2_like_5, PAP2_like_5 proteins
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	7	957445-957526	7	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	CGACTACGAATTTCTCTAATTAC	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|394aa|up_6|NZ_CP054010.1_943113_944295_+,NA|31aa|down_0|NZ_CP054010.1_958250_958343_-	NA|566aa|up_9|NZ_CP054010.1_937074_938772_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|582aa|up_8|NZ_CP054010.1_938774_940520_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|792aa|up_7|NZ_CP054010.1_940719_943095_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|394aa|up_6|NZ_CP054010.1_943113_944295_+	NA	NA|327aa|up_5|NZ_CP054010.1_944423_945404_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|970aa|up_4|NZ_CP054010.1_947335_950245_-	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family	NA|165aa|up_3|NZ_CP054010.1_951229_951724_-	pfam02664, LuxS, S-Ribosylhomocysteinase (LuxS)	NA|251aa|up_2|NZ_CP054010.1_951982_952735_-	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases	NA|834aa|up_1|NZ_CP054010.1_952841_955343_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|442aa|up_0|NZ_CP054010.1_955730_957056_+	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1	NA|31aa|down_0|NZ_CP054010.1_958250_958343_-	NA	NA|174aa|down_1|NZ_CP054010.1_958585_959107_-	pfam18291, HU-HIG, HU domain fused to wHTH, Ig, or Glycine-rich motif	NA|162aa|down_2|NZ_CP054010.1_959724_960210_-	pfam08291, Peptidase_M15_3, Peptidase M15	NA|187aa|down_3|NZ_CP054010.1_960753_961314_+	cd17260, RMtype1_S_EcoEI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|268aa|down_4|NZ_CP054010.1_961720_962524_-	cd01191, INT_C_like_2, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|203aa|down_5|NZ_CP054010.1_962500_963109_+	cd17293, RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Paenibacillus polymyxa SQR-21 SQR21 S subunit (S	NA|463aa|down_6|NZ_CP054010.1_963103_964492_-	cd17274, RMtype1_S_Eco540ANI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|474aa|down_7|NZ_CP054010.1_964668_966090_-	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|903aa|down_8|NZ_CP054010.1_966091_968800_-	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|370aa|down_9|NZ_CP054010.1_969343_970453_-	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only]
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	8	1011245-1011352	8	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	TAACAGTAGTAATCATAATTTGTAGTTGACGAGTT	35	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|228aa|up_4|NZ_CP054010.1_1005448_1006132_-,NA|281aa|up_1|NZ_CP054010.1_1009837_1010680_-,NA|505aa|down_0|NZ_CP054010.1_1012129_1013644_+,NA|86aa|down_2|NZ_CP054010.1_1015603_1015861_+,NA|140aa|down_3|NZ_CP054010.1_1016079_1016499_-,NA|77aa|down_7|NZ_CP054010.1_1018183_1018414_-	NA|277aa|up_9|NZ_CP054010.1_997254_998085_+	pfam12787, EcsC, EcsC protein family	NA|516aa|up_8|NZ_CP054010.1_998488_1000036_+	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS)	NA|419aa|up_7|NZ_CP054010.1_1001630_1002887_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|317aa|up_6|NZ_CP054010.1_1003018_1003969_+	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases	NA|215aa|up_5|NZ_CP054010.1_1004232_1004877_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|228aa|up_4|NZ_CP054010.1_1005448_1006132_-	NA	NA|423aa|up_3|NZ_CP054010.1_1006128_1007397_-	COG4938, COG4938, Uncharacterized conserved protein [Function unknown]	NA|473aa|up_2|NZ_CP054010.1_1008219_1009638_+	pfam03929, PepSY_TM, PepSY-associated TM region	NA|281aa|up_1|NZ_CP054010.1_1009837_1010680_-	NA	NA|157aa|up_0|NZ_CP054010.1_1010704_1011175_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|505aa|down_0|NZ_CP054010.1_1012129_1013644_+	NA	NA|267aa|down_1|NZ_CP054010.1_1013631_1014432_-	pfam00398, RrnaAD, Ribosomal RNA adenine dimethylase	NA|86aa|down_2|NZ_CP054010.1_1015603_1015861_+	NA	NA|140aa|down_3|NZ_CP054010.1_1016079_1016499_-	NA	NA|170aa|down_4|NZ_CP054010.1_1016691_1017201_-	pfam11888, DUF3408, Protein of unknown function (DUF3408)	NA|105aa|down_5|NZ_CP054010.1_1017188_1017503_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|90aa|down_6|NZ_CP054010.1_1017523_1017793_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|77aa|down_7|NZ_CP054010.1_1018183_1018414_-	NA	NA|162aa|down_8|NZ_CP054010.1_1018456_1018942_-	pfam08989, DUF1896, Domain of unknown function (DUF1896)	NA|428aa|down_9|NZ_CP054010.1_1018997_1020281_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain
GCF_013267595.1_ASM1326759v1	NZ_CP054010	Prevotella melaninogenica strain FDAARGOS_760 chromosome 1, complete sequence	9	1094732-1094851	9	CRISPRCasFinder	no		cas2,cas1,cas9,cas3,PrimPol,DEDDh	Orphan	TTAAATGGAGTTAAAGGAGTTAAGACAACACCG	33	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|60aa|up_6|NZ_CP054010.1_1079521_1079701_-,NA|432aa|up_3|NZ_CP054010.1_1084177_1085473_+,NA|61aa|down_6|NZ_CP054010.1_1103290_1103473_+,NA|400aa|down_7|NZ_CP054010.1_1103616_1104816_+,NA|199aa|down_8|NZ_CP054010.1_1104956_1105553_-	NA|144aa|up_9|NZ_CP054010.1_1077673_1078105_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|271aa|up_8|NZ_CP054010.1_1078116_1078929_-	pfam08885, GSCFA, GSCFA family	NA|144aa|up_7|NZ_CP054010.1_1079026_1079458_+	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|60aa|up_6|NZ_CP054010.1_1079521_1079701_-	NA	NA|571aa|up_5|NZ_CP054010.1_1080662_1082375_+	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown]	NA|209aa|up_4|NZ_CP054010.1_1082684_1083311_-	sd00006, TPR, Tetratricopeptide repeat	NA|432aa|up_3|NZ_CP054010.1_1084177_1085473_+	NA	NA|1164aa|up_2|NZ_CP054010.1_1085726_1089218_+	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain	NA|1254aa|up_1|NZ_CP054010.1_1089357_1093119_+	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|409aa|up_0|NZ_CP054010.1_1093467_1094694_+	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|539aa|down_0|NZ_CP054010.1_1095448_1097065_+	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|193aa|down_1|NZ_CP054010.1_1097127_1097706_+	cd00446, GrpE, nucleotide exchange factor GrpE	NA|388aa|down_2|NZ_CP054010.1_1097720_1098884_+	PRK14289, PRK14289, molecular chaperone DnaJ	NA|431aa|down_3|NZ_CP054010.1_1099199_1100492_+	TIGR01499, Folylpolyglutamate_synthase, folylpolyglutamate synthase/dihydrofolate synthase	NA|301aa|down_4|NZ_CP054010.1_1100829_1101732_+	pfam07751, Abi_2, Abi-like protein	NA|288aa|down_5|NZ_CP054010.1_1102075_1102939_+	sd00036, LRR_3, leucine-rich repeats	NA|61aa|down_6|NZ_CP054010.1_1103290_1103473_+	NA	NA|400aa|down_7|NZ_CP054010.1_1103616_1104816_+	NA	NA|199aa|down_8|NZ_CP054010.1_1104956_1105553_-	NA	NA|360aa|down_9|NZ_CP054010.1_1107055_1108135_-	pfam16215, DUF4876, Protein of unknown function (DUF4876)
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	1	749480-749567	1	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	ACATATTGCTTTAATGACATATT	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|154aa|up_2|NZ_CP054011.1_746182_746644_-,NA|162aa|down_8|NZ_CP054011.1_760566_761052_+	NA|382aa|up_9|NZ_CP054011.1_737679_738825_-	pfam14897, EpsG, EpsG family	NA|400aa|up_8|NZ_CP054011.1_738851_740051_-	pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1	NA|330aa|up_7|NZ_CP054011.1_740084_741074_-	PRK10073, PRK10073, putative glycosyl transferase; Provisional	NA|425aa|up_6|NZ_CP054011.1_741060_742335_-	PRK15182, PRK15182, Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA|370aa|up_5|NZ_CP054011.1_742367_743477_-	cd11579, Glyco_tran_WbsX, Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases	NA|492aa|up_4|NZ_CP054011.1_743504_744980_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|328aa|up_3|NZ_CP054011.1_745005_745989_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|154aa|up_2|NZ_CP054011.1_746182_746644_-	NA	NA|250aa|up_1|NZ_CP054011.1_747422_748172_+	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain	NA|415aa|up_0|NZ_CP054011.1_748188_749433_+	pfam09411, PagL, Lipid A 3-O-deacylase (PagL)	NA|341aa|down_0|NZ_CP054011.1_749703_750726_-	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed	NA|599aa|down_1|NZ_CP054011.1_750784_752581_-	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	NA|190aa|down_2|NZ_CP054011.1_752593_753163_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|334aa|down_3|NZ_CP054011.1_753766_754768_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|229aa|down_4|NZ_CP054011.1_754899_755586_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|203aa|down_5|NZ_CP054011.1_755595_756204_+	pfam16271, DUF4924, Domain of unknown function (DUF4924)	NA|295aa|down_6|NZ_CP054011.1_756216_757101_+	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|523aa|down_7|NZ_CP054011.1_757230_758799_+	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|162aa|down_8|NZ_CP054011.1_760566_761052_+	NA	NA|199aa|down_9|NZ_CP054011.1_761172_761769_+	PRK12513, PRK12513, RNA polymerase sigma factor; Provisional
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	2	1056556-1056652	2	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	CTAATTAGGCTAATAAGCCCAATAAACC	28	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|524aa|up_9|NZ_CP054011.1_1044397_1045969_-,NA|71aa|up_8|NZ_CP054011.1_1045992_1046205_-,NA	NA|524aa|up_9|NZ_CP054011.1_1044397_1045969_-	NA	NA|71aa|up_8|NZ_CP054011.1_1045992_1046205_-	NA	NA|245aa|up_7|NZ_CP054011.1_1046746_1047481_-	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p)	NA|452aa|up_6|NZ_CP054011.1_1047693_1049049_-	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|332aa|up_5|NZ_CP054011.1_1049055_1050051_-	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|579aa|up_4|NZ_CP054011.1_1050201_1051938_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|139aa|up_3|NZ_CP054011.1_1052368_1052785_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|349aa|up_2|NZ_CP054011.1_1052785_1053832_+	TIGR00543, Salicylate_biosynthesis_isochorismate_synthase, isochorismate synthases	NA|554aa|up_1|NZ_CP054011.1_1053926_1055588_+	TIGR00173, menD, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	NA|276aa|up_0|NZ_CP054011.1_1055715_1056543_+	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|306aa|down_0|NZ_CP054011.1_1056896_1057814_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|139aa|down_1|NZ_CP054011.1_1057965_1058382_+	TIGR04258, hypothetical_protein, four helix bundle suffix domain	NA|346aa|down_2|NZ_CP054011.1_1058392_1059430_+	cd03320, OSBS, o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway	NA|344aa|down_3|NZ_CP054011.1_1059497_1060529_+	cd17630, OSB_MenE-like, O-succinylbenzoic acid-CoA ligase	NA|309aa|down_4|NZ_CP054011.1_1061070_1061997_+	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|630aa|down_5|NZ_CP054011.1_1062155_1064045_+	pfam03993, DUF349, Domain of Unknown Function (DUF349)	NA|129aa|down_6|NZ_CP054011.1_1064785_1065172_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|120aa|down_7|NZ_CP054011.1_1065555_1065915_+	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|677aa|down_8|NZ_CP054011.1_1065963_1067994_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|289aa|down_9|NZ_CP054011.1_1068008_1068875_+	pfam01148, CTP_transf_1, Cytidylyltransferase family
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	3	1184022-1184117	3	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	TCTGACCTTATGTCATTATGGCT	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA,NA|125aa|down_0|NZ_CP054011.1_1184364_1184739_-,NA|266aa|down_2|NZ_CP054011.1_1186839_1187637_-,NA|189aa|down_4|NZ_CP054011.1_1189910_1190477_-	NA|96aa|up_9|NZ_CP054011.1_1172364_1172652_+	pfam17761, DUF1016_N, DUF1016 N-terminal domain	NA|316aa|up_8|NZ_CP054011.1_1172989_1173937_-	TIGR01136, Cysteine_synthase, cysteine synthase	NA|273aa|up_7|NZ_CP054011.1_1174130_1174949_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|338aa|up_6|NZ_CP054011.1_1174968_1175982_+	pfam14491, DUF4435, Protein of unknown function (DUF4435)	NA|434aa|up_5|NZ_CP054011.1_1176089_1177391_+	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase	NA|737aa|up_4|NZ_CP054011.1_1177599_1179810_-	pfam13166, AAA_13, AAA domain	NA|320aa|up_3|NZ_CP054011.1_1179926_1180886_-	COG2184, Fic, Protein involved in cell division [Cell division and chromosome partitioning]	NA|97aa|up_2|NZ_CP054011.1_1180892_1181183_-	pfam03568, Peptidase_C50, Peptidase family C50	NA|360aa|up_1|NZ_CP054011.1_1181197_1182277_-	COG2184, Fic, Protein involved in cell division [Cell division and chromosome partitioning]	NA|406aa|up_0|NZ_CP054011.1_1182615_1183833_-	pfam12990, DUF3874, Domain of unknonw function from B	NA|125aa|down_0|NZ_CP054011.1_1184364_1184739_-	NA	NA|415aa|down_1|NZ_CP054011.1_1185312_1186557_-	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily	NA|266aa|down_2|NZ_CP054011.1_1186839_1187637_-	NA	NA|635aa|down_3|NZ_CP054011.1_1187704_1189609_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|189aa|down_4|NZ_CP054011.1_1189910_1190477_-	NA	NA|206aa|down_5|NZ_CP054011.1_1190807_1191425_-	pfam16128, DUF4840, Domain of unknown function (DUF4840)	NA|486aa|down_6|NZ_CP054011.1_1191844_1193302_-	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|447aa|down_7|NZ_CP054011.1_1193304_1194645_-	PRK09496, trkA, Trk system potassium transporter TrkA	NA|640aa|down_8|NZ_CP054011.1_1194687_1196607_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|361aa|down_9|NZ_CP054011.1_1196878_1197961_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	4	1352761-1352849	4	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	AATATTCAACATCCATCACCCAA	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|131aa|up_8|NZ_CP054011.1_1342415_1342808_+,NA|46aa|up_6|NZ_CP054011.1_1343346_1343484_-,NA|163aa|down_3|NZ_CP054011.1_1359565_1360054_-,NA|121aa|down_7|NZ_CP054011.1_1365250_1365613_+	NA|454aa|up_9|NZ_CP054011.1_1340981_1342343_-	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|131aa|up_8|NZ_CP054011.1_1342415_1342808_+	NA	NA|166aa|up_7|NZ_CP054011.1_1342767_1343265_-	cd07891, CYTH-like_CthTTM-like_1, CYTH-like Clostridium thermocellum TTM-like subgroup 1	NA|46aa|up_6|NZ_CP054011.1_1343346_1343484_-	NA	NA|372aa|up_5|NZ_CP054011.1_1343669_1344785_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|603aa|up_4|NZ_CP054011.1_1344956_1346765_-	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	NA|682aa|up_3|NZ_CP054011.1_1347463_1349509_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|304aa|up_2|NZ_CP054011.1_1349509_1350421_-	pfam14125, DUF4292, Domain of unknown function (DUF4292)	NA|579aa|up_1|NZ_CP054011.1_1350417_1352154_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|146aa|up_0|NZ_CP054011.1_1352175_1352613_-	PRK00601, dut, dUTP diphosphatase	NA|446aa|down_0|NZ_CP054011.1_1352860_1354198_+	PRK01096, PRK01096, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|332aa|down_1|NZ_CP054011.1_1354472_1355468_+	pfam05728, UPF0227, Uncharacterized protein family (UPF0227)	NA|1150aa|down_2|NZ_CP054011.1_1355734_1359184_+	cd18808, SF1_C_Upf1, C-terminal helicase domain of Upf1-like family helicases	NA|163aa|down_3|NZ_CP054011.1_1359565_1360054_-	NA	NA|607aa|down_4|NZ_CP054011.1_1360675_1362496_+	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|300aa|down_5|NZ_CP054011.1_1362624_1363524_+	cd13935, RNase_H_bacteria_like, RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner	NA|286aa|down_6|NZ_CP054011.1_1363893_1364751_-	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR	NA|121aa|down_7|NZ_CP054011.1_1365250_1365613_+	NA	NA|627aa|down_8|NZ_CP054011.1_1365721_1367602_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|353aa|down_9|NZ_CP054011.1_1367757_1368816_+	pfam13546, DDE_5, DDE superfamily endonuclease
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	5	1390386-1390481	5	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	CCCCTACTTTATCCCATTAGGCTCTCCCCT	30	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|155aa|up_6|NZ_CP054011.1_1383947_1384412_+,NA|226aa|up_4|NZ_CP054011.1_1386203_1386881_-,NA|112aa|down_3|NZ_CP054011.1_1396470_1396806_+,NA|454aa|down_4|NZ_CP054011.1_1396826_1398188_+,NA|72aa|down_6|NZ_CP054011.1_1401195_1401411_+,NA|513aa|down_7|NZ_CP054011.1_1401450_1402989_+	NA|1095aa|up_9|NZ_CP054011.1_1377007_1380292_+	NF033455, BREX_6_MTaseX, BREX-6 system adenine-specific DNA-methyltransferase PglX	NA|218aa|up_8|NZ_CP054011.1_1380307_1380961_+	pfam13643, DUF4145, Domain of unknown function (DUF4145)	NA|585aa|up_7|NZ_CP054011.1_1380964_1382719_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|155aa|up_6|NZ_CP054011.1_1383947_1384412_+	NA	NA|364aa|up_5|NZ_CP054011.1_1385042_1386134_+	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|226aa|up_4|NZ_CP054011.1_1386203_1386881_-	NA	NA|133aa|up_3|NZ_CP054011.1_1386965_1387364_-	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|157aa|up_2|NZ_CP054011.1_1387385_1387856_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|196aa|up_1|NZ_CP054011.1_1388790_1389378_-	PRK13525, PRK13525, pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA|291aa|up_0|NZ_CP054011.1_1389374_1390247_-	PRK04180, PRK04180, pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA|326aa|down_0|NZ_CP054011.1_1390508_1391486_-	COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]	NA|822aa|down_1|NZ_CP054011.1_1392306_1394772_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|333aa|down_2|NZ_CP054011.1_1395475_1396474_+	cd03408, SPFH_like_u1, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|112aa|down_3|NZ_CP054011.1_1396470_1396806_+	NA	NA|454aa|down_4|NZ_CP054011.1_1396826_1398188_+	NA	NA|254aa|down_5|NZ_CP054011.1_1398344_1399106_+	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown]	NA|72aa|down_6|NZ_CP054011.1_1401195_1401411_+	NA	NA|513aa|down_7|NZ_CP054011.1_1401450_1402989_+	NA	NA|238aa|down_8|NZ_CP054011.1_1406883_1407597_-	pfam16266, DUF4919, Domain of unknown function (DUF4919)	NA|514aa|down_9|NZ_CP054011.1_1407743_1409285_-	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	6	1592377-1592494	6	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	CACAAGCTAAGACTCCTCCCCCTTCGGGGA	30	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA,NA|277aa|down_1|NZ_CP054011.1_1593537_1594368_+,NA|272aa|down_3|NZ_CP054011.1_1595636_1596452_-	NA|257aa|up_9|NZ_CP054011.1_1578293_1579064_-	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]	NA|260aa|up_8|NZ_CP054011.1_1579152_1579932_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|334aa|up_7|NZ_CP054011.1_1580125_1581127_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|658aa|up_6|NZ_CP054011.1_1581177_1583151_-	cd16015, LTA_synthase, Lipoteichoic acid synthase like	NA|319aa|up_5|NZ_CP054011.1_1583639_1584596_-	cd07984, LPLAT_LABLAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	NA|671aa|up_4|NZ_CP054011.1_1584592_1586605_-	cd16015, LTA_synthase, Lipoteichoic acid synthase like	NA|620aa|up_3|NZ_CP054011.1_1586627_1588487_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|443aa|up_2|NZ_CP054011.1_1588587_1589916_-	PRK14329, PRK14329, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|415aa|up_1|NZ_CP054011.1_1590460_1591705_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|139aa|up_0|NZ_CP054011.1_1591819_1592236_+	pfam02657, SufE, Fe-S metabolism associated domain	NA|192aa|down_0|NZ_CP054011.1_1592515_1593091_+	cd18097, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|277aa|down_1|NZ_CP054011.1_1593537_1594368_+	NA	NA|334aa|down_2|NZ_CP054011.1_1594472_1595474_-	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)	NA|272aa|down_3|NZ_CP054011.1_1595636_1596452_-	NA	NA|219aa|down_4|NZ_CP054011.1_1596479_1597136_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|766aa|down_5|NZ_CP054011.1_1597144_1599442_-	TIGR02063, Ribonuclease_R, ribonuclease R	NA|330aa|down_6|NZ_CP054011.1_1599708_1600698_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|323aa|down_7|NZ_CP054011.1_1600779_1601748_+	pfam14378, PAP2_3, PAP2 superfamily	NA|378aa|down_8|NZ_CP054011.1_1601888_1603022_-	COG1672, COG1672, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|826aa|down_9|NZ_CP054011.1_1603385_1605863_-	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	7	1843329-1843428	7	CRISPRCasFinder	no		DEDDh,csa3,RT,WYL	Orphan	TTGTCTTTAAGCGTCATCAGTAATCATAATTATG	34	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA,NA|160aa|down_0|NZ_CP054011.1_1843635_1844115_-,NA|166aa|down_7|NZ_CP054011.1_1850894_1851392_+,NA|483aa|down_8|NZ_CP054011.1_1851699_1853148_+	NA|179aa|up_9|NZ_CP054011.1_1828539_1829076_+	cd04681, Nudix_Hydrolase_22, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|779aa|up_8|NZ_CP054011.1_1829154_1831491_+	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|192aa|up_7|NZ_CP054011.1_1831585_1832161_+	PRK13949, PRK13949, shikimate kinase; Provisional	NA|631aa|up_6|NZ_CP054011.1_1832249_1834142_+	PRK05354, PRK05354, biosynthetic arginine decarboxylase	NA|699aa|up_5|NZ_CP054011.1_1834728_1836825_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|335aa|up_4|NZ_CP054011.1_1837099_1838104_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|406aa|up_3|NZ_CP054011.1_1838237_1839455_-	PRK13745, PRK13745, anaerobic sulfatase-maturation protein	NA|141aa|up_2|NZ_CP054011.1_1840243_1840666_-	cd07670, BAR_SNX18, The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 18	NA|260aa|up_1|NZ_CP054011.1_1840847_1841627_-	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis	NA|425aa|up_0|NZ_CP054011.1_1841623_1842898_-	cd03825, GT4_WcaC-like, putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins	NA|160aa|down_0|NZ_CP054011.1_1843635_1844115_-	NA	NA|171aa|down_1|NZ_CP054011.1_1844104_1844617_-	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1	NA|231aa|down_2|NZ_CP054011.1_1845079_1845772_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|190aa|down_3|NZ_CP054011.1_1845794_1846364_-	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|297aa|down_4|NZ_CP054011.1_1846498_1847389_+	PRK01911, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|560aa|down_5|NZ_CP054011.1_1847536_1849216_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|310aa|down_6|NZ_CP054011.1_1849344_1850274_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|166aa|down_7|NZ_CP054011.1_1850894_1851392_+	NA	NA|483aa|down_8|NZ_CP054011.1_1851699_1853148_+	NA	NA|176aa|down_9|NZ_CP054011.1_1853161_1853689_+	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain
GCF_013267595.1_ASM1326759v1	NZ_CP054011	Prevotella melaninogenica strain FDAARGOS_760 chromosome 2, complete sequence	8	1915220-1915319	8	CRISPRCasFinder	no	WYL	DEDDh,csa3,RT,WYL	Unclear	CAGGCAGGTAGCTGCTGCAAGAAGCAGG	28	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,cas3,PrimPol,DEDDh,csa3,RT,WYL	NA|241aa|up_6|NZ_CP054011.1_1905100_1905823_-,NA	WYL|307aa|up_9|NZ_CP054011.1_1901633_1902554_+	pfam13280, WYL, WYL domain	NA|414aa|up_8|NZ_CP054011.1_1902684_1903926_+	cd01830, XynE_like, SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE	NA|269aa|up_7|NZ_CP054011.1_1904256_1905063_-	pfam08929, DUF1911, Domain of unknown function (DUF1911)	NA|241aa|up_6|NZ_CP054011.1_1905100_1905823_-	NA	NA|409aa|up_5|NZ_CP054011.1_1908190_1909417_-	pfam14575, EphA2_TM, Ephrin type-A receptor 2 transmembrane domain	NA|155aa|up_4|NZ_CP054011.1_1909826_1910291_+	TIGR01352, Protein_TonB, TonB family C-terminal domain	NA|161aa|up_3|NZ_CP054011.1_1910303_1910786_+	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|150aa|up_2|NZ_CP054011.1_1911072_1911522_+	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|506aa|up_1|NZ_CP054011.1_1911828_1913346_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|201aa|up_0|NZ_CP054011.1_1913491_1914094_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|222aa|down_0|NZ_CP054011.1_1915502_1916168_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|230aa|down_1|NZ_CP054011.1_1916183_1916873_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|197aa|down_2|NZ_CP054011.1_1917182_1917773_+	pfam11307, DUF3109, Protein of unknown function (DUF3109)	NA|295aa|down_3|NZ_CP054011.1_1917824_1918709_-	pfam12833, HTH_18, Helix-turn-helix domain	NA|656aa|down_4|NZ_CP054011.1_1918925_1920893_-	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|686aa|down_5|NZ_CP054011.1_1921123_1923181_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|401aa|down_6|NZ_CP054011.1_1923292_1924495_+	cd17485, MFS_MFSD3, Major facilitator superfamily domain containing 3 protein	NA|455aa|down_7|NZ_CP054011.1_1924680_1926045_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|456aa|down_8|NZ_CP054011.1_1926108_1927476_+	PLN02576, PLN02576, protoporphyrinogen oxidase	NA|85aa|down_9|NZ_CP054011.1_1927723_1927978_-	pfam01649, Ribosomal_S20p, Ribosomal protein S20
