assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013305305.1_ASM1330530v1	NZ_CP054268	Klebsiella pneumoniae strain 39427 chromosome, complete genome	1	4079498-4079593	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,RT,DinG,WYL	Orphan	TGGCACTTTGTTGGCATTCTGTTGGCACAA	30	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,RT,DinG,WYL	NA|46aa|up_9|NZ_CP054268.1_4073214_4073352_-,NA|59aa|up_4|NZ_CP054268.1_4075746_4075923_-,NA|169aa|up_2|NZ_CP054268.1_4076871_4077378_-,NA|49aa|down_0|NZ_CP054268.1_4079979_4080126_-,NA|72aa|down_4|NZ_CP054268.1_4081874_4082090_+,NA|37aa|down_5|NZ_CP054268.1_4082086_4082197_+,NA|65aa|down_6|NZ_CP054268.1_4082189_4082384_+,NA|95aa|down_7|NZ_CP054268.1_4082472_4082757_+	NA|46aa|up_9|NZ_CP054268.1_4073214_4073352_-	NA	NA|212aa|up_8|NZ_CP054268.1_4073348_4073984_-	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|57aa|up_7|NZ_CP054268.1_4073976_4074147_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_6|NZ_CP054268.1_4074146_4074602_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|216aa|up_5|NZ_CP054268.1_4075102_4075750_-	pfam04448, DUF551, Protein of unknown function (DUF551)	NA|59aa|up_4|NZ_CP054268.1_4075746_4075923_-	NA	NA|281aa|up_3|NZ_CP054268.1_4075922_4076765_-	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|169aa|up_2|NZ_CP054268.1_4076871_4077378_-	NA	NA|98aa|up_1|NZ_CP054268.1_4077374_4077668_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|472aa|up_0|NZ_CP054268.1_4077667_4079083_-	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|49aa|down_0|NZ_CP054268.1_4079979_4080126_-	NA	NA|74aa|down_1|NZ_CP054268.1_4080211_4080433_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|78aa|down_2|NZ_CP054268.1_4080473_4080707_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|down_3|NZ_CP054268.1_4080834_4081524_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|72aa|down_4|NZ_CP054268.1_4081874_4082090_+	NA	NA|37aa|down_5|NZ_CP054268.1_4082086_4082197_+	NA	NA|65aa|down_6|NZ_CP054268.1_4082189_4082384_+	NA	NA|95aa|down_7|NZ_CP054268.1_4082472_4082757_+	NA	NA|282aa|down_8|NZ_CP054268.1_4082772_4083618_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_9|NZ_CP054268.1_4083614_4084295_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain
GCF_013305305.1_ASM1330530v1	NZ_CP054268	Klebsiella pneumoniae strain 39427 chromosome, complete genome	2	4571622-4571716	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,RT,DinG,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,RT,DinG,WYL	NA,NA	NA|256aa|up_9|NZ_CP054268.1_4556941_4557709_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|282aa|up_8|NZ_CP054268.1_4557837_4558683_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|570aa|up_7|NZ_CP054268.1_4559020_4560730_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP054268.1_4560740_4562243_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP054268.1_4562380_4563076_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP054268.1_4563251_4565609_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP054268.1_4565796_4568703_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP054268.1_4568715_4569375_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP054268.1_4569449_4569989_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP054268.1_4570168_4571533_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP054268.1_4571857_4573483_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP054268.1_4573472_4574171_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP054268.1_4574203_4575031_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP054268.1_4575274_4577623_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP054268.1_4577677_4578964_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP054268.1_4578969_4579959_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP054268.1_4579955_4580777_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP054268.1_4580779_4581157_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP054268.1_4581161_4582010_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP054268.1_4582265_4582745_-	PRK10769, folA, type 3 dihydrofolate reductase
GCF_013305305.1_ASM1330530v1	NZ_CP054268	Klebsiella pneumoniae strain 39427 chromosome, complete genome	3	4817055-4817327	1,1	CRT,PILER-CR	no		cas3,csa3,DEDDh,RT,DinG,WYL	Orphan	GCCCGGCGGCGCTGCGCTTGCCGGGCCT,GCCCGGCGGCGCTGCGCTTGCCGGGCCTGGGGTATAGGGGC	28,41	0	0	NA	NA	NA:NA	3,2	3	Orphan	cas3,csa3,DEDDh,RT,DinG,WYL	NA,NA	NA|296aa|up_9|NZ_CP054268.1_4803794_4804682_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|275aa|up_8|NZ_CP054268.1_4804692_4805517_+	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	NA|358aa|up_7|NZ_CP054268.1_4805522_4806596_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|437aa|up_6|NZ_CP054268.1_4806588_4807899_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|300aa|up_5|NZ_CP054268.1_4808042_4808942_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|295aa|up_4|NZ_CP054268.1_4808965_4809850_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|338aa|up_3|NZ_CP054268.1_4809891_4810905_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|647aa|up_2|NZ_CP054268.1_4810951_4812892_-	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase	NA|638aa|up_1|NZ_CP054268.1_4813397_4815311_+	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090)	NA|286aa|up_0|NZ_CP054268.1_4815462_4816320_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|270aa|down_0|NZ_CP054268.1_4817791_4818601_-	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]	NA|502aa|down_1|NZ_CP054268.1_4818619_4820125_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|274aa|down_2|NZ_CP054268.1_4820475_4821297_+	COG4130, COG4130, Predicted sugar epimerase [Carbohydrate transport and metabolism]	NA|501aa|down_3|NZ_CP054268.1_4821395_4822898_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|down_4|NZ_CP054268.1_4822946_4824029_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|366aa|down_5|NZ_CP054268.1_4824028_4825126_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|down_6|NZ_CP054268.1_4825515_4827027_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_7|NZ_CP054268.1_4827146_4827590_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_8|NZ_CP054268.1_4827589_4830445_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|168aa|down_9|NZ_CP054268.1_4830565_4831069_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
