assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	1	12208-12293	1	CRISPRCasFinder	no	csa3	csa3,DEDDh,cas3,DinG,WYL,RT	Type I-A	ACTAATGATACGCAAAAATCAGTTGG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA|53aa|down_7|NZ_CP053356.1_23255_23414_-,NA|35aa|down_8|NZ_CP053356.1_24093_24198_+,NA|364aa|down_9|NZ_CP053356.1_24630_25722_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|303aa|up_3|NZ_CP053356.1_651_1560_+	cd09989, Arginase, Arginase family	NA|270aa|up_2|NZ_CP053356.1_1748_2558_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|311aa|up_1|NZ_CP053356.1_2559_3492_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|452aa|up_0|NZ_CP053356.1_3518_4874_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|369aa|down_0|NZ_CP053356.1_12915_14022_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|145aa|down_1|NZ_CP053356.1_14021_14456_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|711aa|down_2|NZ_CP053356.1_14467_16600_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|513aa|down_3|NZ_CP053356.1_16634_18173_-	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|602aa|down_4|NZ_CP053356.1_18853_20659_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|261aa|down_5|NZ_CP053356.1_20890_21673_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|286aa|down_6|NZ_CP053356.1_21740_22598_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|53aa|down_7|NZ_CP053356.1_23255_23414_-	NA	NA|35aa|down_8|NZ_CP053356.1_24093_24198_+	NA	NA|364aa|down_9|NZ_CP053356.1_24630_25722_-	NA
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	2	24533-24614	2	CRISPRCasFinder	no	csa3	csa3,DEDDh,cas3,DinG,WYL,RT	Type I-A	AAGAAGCCCCTAACAACTAAAGTTG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA|53aa|up_1|NZ_CP053356.1_23255_23414_-,NA|35aa|up_0|NZ_CP053356.1_24093_24198_+,NA|364aa|down_0|NZ_CP053356.1_24630_25722_-,NA|77aa|down_5|NZ_CP053356.1_29508_29739_+	NA|2482aa|up_9|NZ_CP053356.1_5151_12597_+	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain	NA|369aa|up_8|NZ_CP053356.1_12915_14022_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|145aa|up_7|NZ_CP053356.1_14021_14456_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|711aa|up_6|NZ_CP053356.1_14467_16600_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|513aa|up_5|NZ_CP053356.1_16634_18173_-	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|602aa|up_4|NZ_CP053356.1_18853_20659_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|261aa|up_3|NZ_CP053356.1_20890_21673_+	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|286aa|up_2|NZ_CP053356.1_21740_22598_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|53aa|up_1|NZ_CP053356.1_23255_23414_-	NA	NA|35aa|up_0|NZ_CP053356.1_24093_24198_+	NA	NA|364aa|down_0|NZ_CP053356.1_24630_25722_-	NA	NA|326aa|down_1|NZ_CP053356.1_25987_26965_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	csa3|107aa|down_2|NZ_CP053356.1_26966_27287_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|222aa|down_3|NZ_CP053356.1_27438_28104_+	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	NA|313aa|down_4|NZ_CP053356.1_28539_29478_+	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|77aa|down_5|NZ_CP053356.1_29508_29739_+	NA	NA|458aa|down_6|NZ_CP053356.1_30410_31784_+	pfam01878, EVE, EVE domain	NA|138aa|down_7|NZ_CP053356.1_32240_32654_+	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|148aa|down_8|NZ_CP053356.1_32853_33297_+	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|237aa|down_9|NZ_CP053356.1_33417_34128_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	3	153805-153886	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	ACAATGCAAGTTGGGGTGGGGGCC	24	1	5	153829-153862|153829-153862|153829-153862|153829-153862|153829-153862	NZ_CP053356.1_1159049-1159016|NZ_CP053356.1_1472513-1472546|NZ_CP053356.1_504946-504913|NZ_CP053356.1_942892-942925|NZ_CP053356.1_2343673-2343706	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA|61aa|down_4|NZ_CP053356.1_160999_161182_-,NA|49aa|down_6|NZ_CP053356.1_161434_161581_-	NA|48aa|up_9|NZ_CP053356.1_143989_144133_-	smart00794, AgrD, Staphylococcal AgrD protein	NA|188aa|up_8|NZ_CP053356.1_144135_144699_-	COG4512, AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription]	NA|45aa|up_7|NZ_CP053356.1_144934_145069_+	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|262aa|up_6|NZ_CP053356.1_145668_146454_-	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|209aa|up_5|NZ_CP053356.1_146814_147441_-	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|420aa|up_4|NZ_CP053356.1_147637_148897_+	PRK10819, PRK10819, transport protein TonB; Provisional	NA|248aa|up_3|NZ_CP053356.1_148921_149665_-	pfam02517, Abi, CAAX protease self-immunity	NA|95aa|up_2|NZ_CP053356.1_149839_150124_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|539aa|up_1|NZ_CP053356.1_150199_151816_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|436aa|up_0|NZ_CP053356.1_152355_153663_-	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|408aa|down_0|NZ_CP053356.1_154106_155330_-	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|352aa|down_1|NZ_CP053356.1_155765_156821_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|339aa|down_2|NZ_CP053356.1_156842_157859_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|346aa|down_3|NZ_CP053356.1_158977_160015_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|61aa|down_4|NZ_CP053356.1_160999_161182_-	NA	NA|62aa|down_5|NZ_CP053356.1_161252_161438_-	pfam00815, Histidinol_dh, Histidinol dehydrogenase	NA|49aa|down_6|NZ_CP053356.1_161434_161581_-	NA	NA|285aa|down_7|NZ_CP053356.1_161654_162509_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|239aa|down_8|NZ_CP053356.1_162520_163237_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|81aa|down_9|NZ_CP053356.1_163400_163643_+	pfam05339, DUF739, Protein of unknown function (DUF739)
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	4	631576-631660	4	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	TTCTACAGGCAATGCAAGTTGGGGTG	26	1	2	631602-631634|631602-631634	NZ_CP053356.1_947298-947266|NZ_CP053356.1_1466955-1466987	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA	NA|190aa|up_9|NZ_CP053356.1_622205_622775_+	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase	NA|195aa|up_8|NZ_CP053356.1_622764_623349_+	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|118aa|up_7|NZ_CP053356.1_623349_623703_+	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|239aa|up_6|NZ_CP053356.1_623705_624422_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|229aa|up_5|NZ_CP053356.1_624461_625148_+	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|154aa|up_4|NZ_CP053356.1_625239_625701_+	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|734aa|up_3|NZ_CP053356.1_625705_627907_+	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|325aa|up_2|NZ_CP053356.1_627963_628938_+	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|84aa|up_1|NZ_CP053356.1_628982_629234_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|608aa|up_0|NZ_CP053356.1_629579_631403_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|375aa|down_0|NZ_CP053356.1_631968_633093_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|326aa|down_1|NZ_CP053356.1_633193_634171_+	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|209aa|down_2|NZ_CP053356.1_634202_634829_+	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|611aa|down_3|NZ_CP053356.1_634897_636730_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|380aa|down_4|NZ_CP053356.1_636865_638005_+	PRK14280, PRK14280, molecular chaperone DnaJ	NA|313aa|down_5|NZ_CP053356.1_638008_638947_+	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|251aa|down_6|NZ_CP053356.1_638948_639701_+	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|449aa|down_7|NZ_CP053356.1_639707_641054_+	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|59aa|down_8|NZ_CP053356.1_641346_641523_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|228aa|down_9|NZ_CP053356.1_641766_642450_+	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	5	1423724-1423805	5	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	TTCTACAGGCAATGCAAGTTGGGG	24	1	1	1423748-1423781	NZ_CP053356.1_947299-947266	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA	NA|417aa|up_9|NZ_CP053356.1_1414151_1415402_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|436aa|up_8|NZ_CP053356.1_1415507_1416815_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|254aa|up_7|NZ_CP053356.1_1416912_1417674_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|284aa|up_6|NZ_CP053356.1_1418001_1418853_+	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|65aa|up_5|NZ_CP053356.1_1419086_1419281_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|274aa|up_4|NZ_CP053356.1_1419634_1420456_-	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|232aa|up_3|NZ_CP053356.1_1420473_1421169_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|342aa|up_2|NZ_CP053356.1_1421161_1422187_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|99aa|up_1|NZ_CP053356.1_1422436_1422733_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|129aa|up_0|NZ_CP053356.1_1422725_1423112_-	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|293aa|down_0|NZ_CP053356.1_1423908_1424787_-	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|127aa|down_1|NZ_CP053356.1_1424965_1425346_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|119aa|down_2|NZ_CP053356.1_1425503_1425860_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|107aa|down_3|NZ_CP053356.1_1426003_1426324_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|180aa|down_4|NZ_CP053356.1_1426474_1427014_-	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|239aa|down_5|NZ_CP053356.1_1427096_1427813_-	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|141aa|down_6|NZ_CP053356.1_1427960_1428383_+	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|165aa|down_7|NZ_CP053356.1_1428781_1429276_+	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|206aa|down_8|NZ_CP053356.1_1429430_1430048_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|194aa|down_9|NZ_CP053356.1_1430120_1430702_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	6	1472467-1472545	6	CRISPRCasFinder	no	cas3	csa3,DEDDh,cas3,DinG,WYL,RT	Unclear	AGAATTTCGAAAAGAAATTCTACA	24	1	1	1472491-1472521	NZ_CP053356.1_597147-597177	NA	1	1	Unclear	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA|36aa|down_5|NZ_CP053356.1_1480023_1480131_-,NA|35aa|down_7|NZ_CP053356.1_1481563_1481668_-	NA|301aa|up_9|NZ_CP053356.1_1461348_1462251_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|196aa|up_8|NZ_CP053356.1_1462493_1463081_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|315aa|up_7|NZ_CP053356.1_1463644_1464589_-	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|332aa|up_6|NZ_CP053356.1_1464699_1465695_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|304aa|up_5|NZ_CP053356.1_1465691_1466603_-	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|312aa|up_4|NZ_CP053356.1_1467488_1468424_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|480aa|up_3|NZ_CP053356.1_1468490_1469930_-	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|162aa|up_2|NZ_CP053356.1_1469937_1470423_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|280aa|up_1|NZ_CP053356.1_1470430_1471270_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|311aa|up_0|NZ_CP053356.1_1471275_1472208_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|949aa|down_0|NZ_CP053356.1_1472871_1475718_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|662aa|down_1|NZ_CP053356.1_1475725_1477711_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|79aa|down_2|NZ_CP053356.1_1477979_1478216_-	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|217aa|down_3|NZ_CP053356.1_1478212_1478863_-	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|280aa|down_4|NZ_CP053356.1_1479036_1479876_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|36aa|down_5|NZ_CP053356.1_1480023_1480131_-	NA	NA|370aa|down_6|NZ_CP053356.1_1480284_1481395_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|35aa|down_7|NZ_CP053356.1_1481563_1481668_-	NA	NA|844aa|down_8|NZ_CP053356.1_1481709_1484241_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|191aa|down_9|NZ_CP053356.1_1484654_1485227_-	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	7	1868709-1868811	7	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	CAAATTTAATACTCAATTCATATA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA|179aa|up_7|NZ_CP053356.1_1860327_1860864_+,NA|221aa|up_1|NZ_CP053356.1_1866955_1867618_+,NA|33aa|down_0|NZ_CP053356.1_1869486_1869585_-,NA|128aa|down_6|NZ_CP053356.1_1875832_1876216_+,NA|70aa|down_8|NZ_CP053356.1_1877040_1877250_+	NA|91aa|up_9|NZ_CP053356.1_1858560_1858833_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|235aa|up_8|NZ_CP053356.1_1859231_1859936_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|179aa|up_7|NZ_CP053356.1_1860327_1860864_+	NA	NA|514aa|up_6|NZ_CP053356.1_1860976_1862518_-	PRK00074, guaA, GMP synthase; Reviewed	NA|489aa|up_5|NZ_CP053356.1_1862542_1864009_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|423aa|up_4|NZ_CP053356.1_1864046_1865315_-	TIGR03173, pbuX, xanthine permease	NA|193aa|up_3|NZ_CP053356.1_1865314_1865893_-	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|136aa|up_2|NZ_CP053356.1_1866405_1866813_+	pfam11181, YflT, Heat induced stress protein YflT	NA|221aa|up_1|NZ_CP053356.1_1866955_1867618_+	NA	NA|319aa|up_0|NZ_CP053356.1_1867735_1868692_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|33aa|down_0|NZ_CP053356.1_1869486_1869585_-	NA	NA|463aa|down_1|NZ_CP053356.1_1869669_1871058_+	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|252aa|down_2|NZ_CP053356.1_1871137_1871893_-	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|190aa|down_3|NZ_CP053356.1_1872384_1872954_+	TIGR03137, AhpC, peroxiredoxin	NA|508aa|down_4|NZ_CP053356.1_1872969_1874493_+	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|209aa|down_5|NZ_CP053356.1_1874936_1875563_+	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|128aa|down_6|NZ_CP053356.1_1875832_1876216_+	NA	NA|194aa|down_7|NZ_CP053356.1_1876281_1876863_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|70aa|down_8|NZ_CP053356.1_1877040_1877250_+	NA	NA|84aa|down_9|NZ_CP053356.1_1877288_1877540_-	COG2261, COG2261, Predicted membrane protein [Function unknown]
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	8	2542003-2542136	1	PILER-CR	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	TATTGAAGAAGATACAA	17	2	2	2542020-2542065|2542083-2542119	NZ_CP053356.1_2538454-2538499|NZ_CP053356.1_2538517-2538553	NA	2	2	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA|78aa|down_4|NZ_CP053356.1_2550069_2550303_+,NA|103aa|down_5|NZ_CP053356.1_2550410_2550719_-,NA|89aa|down_6|NZ_CP053356.1_2550862_2551129_-	NA|204aa|up_9|NZ_CP053356.1_2524469_2525081_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|426aa|up_8|NZ_CP053356.1_2525627_2526905_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|608aa|up_7|NZ_CP053356.1_2527381_2529205_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|139aa|up_6|NZ_CP053356.1_2529343_2529760_+	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown]	NA|231aa|up_5|NZ_CP053356.1_2529990_2530683_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|255aa|up_4|NZ_CP053356.1_2530847_2531612_+	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|227aa|up_3|NZ_CP053356.1_2531764_2532445_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|518aa|up_2|NZ_CP053356.1_2532468_2534022_+	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type	NA|453aa|up_1|NZ_CP053356.1_2534138_2535497_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|1011aa|up_0|NZ_CP053356.1_2535965_2538998_+	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin	NA|289aa|down_0|NZ_CP053356.1_2542744_2543611_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|248aa|down_1|NZ_CP053356.1_2543821_2544565_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|119aa|down_2|NZ_CP053356.1_2544888_2545245_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|988aa|down_3|NZ_CP053356.1_2545549_2548513_+	pfam18483, Bact_lectin, Bacterial lectin	NA|78aa|down_4|NZ_CP053356.1_2550069_2550303_+	NA	NA|103aa|down_5|NZ_CP053356.1_2550410_2550719_-	NA	NA|89aa|down_6|NZ_CP053356.1_2550862_2551129_-	NA	NA|603aa|down_7|NZ_CP053356.1_2551412_2553221_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|131aa|down_8|NZ_CP053356.1_2553352_2553745_+	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|954aa|down_9|NZ_CP053356.1_2553746_2556608_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	9	2617166-2617244	8	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	TGCAAGTTGGCGGGGCCCCAACA	23	1	5	2617189-2617221|2617189-2617221|2617189-2617221|2617189-2617221|2617189-2617221	NZ_CP053356.1_1423435-1423467|NZ_CP053356.1_1459656-1459688|NZ_CP053356.1_129819-129787|NZ_CP053356.1_1459712-1459744|NZ_CP053356.1_1459768-1459800	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA|220aa|up_3|NZ_CP053356.1_2614090_2614750_-,NA|36aa|up_0|NZ_CP053356.1_2616739_2616847_+,NA	NA|693aa|up_9|NZ_CP053356.1_2606552_2608631_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|470aa|up_8|NZ_CP053356.1_2608768_2610178_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|269aa|up_7|NZ_CP053356.1_2610463_2611270_+	TIGR03729, acc_ester, putative phosphoesterase	NA|219aa|up_6|NZ_CP053356.1_2611332_2611989_-	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown]	NA|158aa|up_5|NZ_CP053356.1_2612101_2612575_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|up_4|NZ_CP053356.1_2612697_2613909_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|220aa|up_3|NZ_CP053356.1_2614090_2614750_-	NA	NA|381aa|up_2|NZ_CP053356.1_2614809_2615952_-	TIGR00045, Glycerate_kinase, glycerate kinase	NA|129aa|up_1|NZ_CP053356.1_2616219_2616606_+	COG2246, COG2246, Predicted membrane protein [Function unknown]	NA|36aa|up_0|NZ_CP053356.1_2616739_2616847_+	NA	NA|588aa|down_0|NZ_CP053356.1_2617549_2619313_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|578aa|down_1|NZ_CP053356.1_2619337_2621071_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|229aa|down_2|NZ_CP053356.1_2621523_2622210_+	COG0132, BioD, Dethiobiotin synthetase [Coenzyme metabolism]	NA|453aa|down_3|NZ_CP053356.1_2622187_2623546_+	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase	NA|336aa|down_4|NZ_CP053356.1_2623547_2624555_+	PRK06256, PRK06256, biotin synthase; Validated	NA|372aa|down_5|NZ_CP053356.1_2624532_2625648_+	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|231aa|down_6|NZ_CP053356.1_2625658_2626351_+	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|156aa|down_7|NZ_CP053356.1_2626361_2626829_+	pfam06177, QueT, QueT transporter	NA|326aa|down_8|NZ_CP053356.1_2626880_2627858_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|316aa|down_9|NZ_CP053356.1_2627859_2628807_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family
GCF_013307025.1_ASM1330702v1	NZ_CP053356	Staphylococcus aureus strain 14507 chromosome, complete genome	10	2781880-2781960	9	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,RT	Orphan	CAAGTTGGCGGGGCCCCAACACAGA	25	1	15	2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935|2781905-2781935	NZ_CP053356.1_1459716-1459746|NZ_CP053356.1_1459772-1459802|NZ_CP053356.1_616996-616966|NZ_CP053356.1_947340-947310|NZ_CP053356.1_1153441-1153411|NZ_CP053356.1_1640447-1640417|NZ_CP053356.1_1907548-1907518|NZ_CP053356.1_256093-256123|NZ_CP053356.1_858757-858787|NZ_CP053356.1_858873-858903|NZ_CP053356.1_1257467-1257497|NZ_CP053356.1_1423439-1423469|NZ_CP053356.1_1459660-1459690|NZ_CP053356.1_2205512-2205542|NZ_CP053356.1_2792706-2792736	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,RT	NA,NA|62aa|down_0|NZ_CP053356.1_2782001_2782187_-,NA|84aa|down_5|NZ_CP053356.1_2785326_2785578_-,NA|106aa|down_8|NZ_CP053356.1_2790699_2791017_-,NA|55aa|down_9|NZ_CP053356.1_2791261_2791426_-	NA|202aa|up_9|NZ_CP053356.1_2774772_2775378_+	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|335aa|up_8|NZ_CP053356.1_2775547_2776552_+	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|169aa|up_7|NZ_CP053356.1_2776582_2777089_+	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|165aa|up_6|NZ_CP053356.1_2777090_2777585_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|420aa|up_5|NZ_CP053356.1_2777647_2778907_+	cd00887, MoeA, MoeA family	NA|162aa|up_4|NZ_CP053356.1_2778903_2779389_+	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|149aa|up_3|NZ_CP053356.1_2779402_2779849_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|78aa|up_2|NZ_CP053356.1_2779854_2780088_+	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|200aa|up_1|NZ_CP053356.1_2780094_2780694_+	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|341aa|up_0|NZ_CP053356.1_2780713_2781736_+	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|62aa|down_0|NZ_CP053356.1_2782001_2782187_-	NA	NA|117aa|down_1|NZ_CP053356.1_2782312_2782663_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|404aa|down_2|NZ_CP053356.1_2782764_2783976_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|147aa|down_3|NZ_CP053356.1_2783968_2784409_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|255aa|down_4|NZ_CP053356.1_2784570_2785335_+	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|84aa|down_5|NZ_CP053356.1_2785326_2785578_-	NA	NA|422aa|down_6|NZ_CP053356.1_2785966_2787232_+	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|1056aa|down_7|NZ_CP053356.1_2787348_2790516_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|106aa|down_8|NZ_CP053356.1_2790699_2791017_-	NA	NA|55aa|down_9|NZ_CP053356.1_2791261_2791426_-	NA
