The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	471223	478891	4010543		Bacillus_phage(33.33%)	9	NA	NA
WP_029972897.1|471223_471961_+	NTP transferase domain-containing protein	NA	G3MA50	Bacillus_virus	42.7	5.0e-47
WP_061860985.1|471963_472911_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	42.6	2.3e-68
WP_024085934.1|472931_473780_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.3	5.4e-37
WP_003150986.1|473776_474232_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	NA	NA	NA	NA
WP_025649399.1|474590_475517_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	45.9	1.1e-43
WP_053285333.1|475581_476286_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_174532367.1|476306_477026_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_014419158.1|477255_477954_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.8	3.2e-35
WP_053285335.1|477955_478891_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.5	1.3e-23
>prophage 2
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	1442566	1484048	4010543	coat,protease,tRNA	Bacillus_virus(20.0%)	40	NA	NA
WP_007408149.1|1442566_1443829_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	65.3	4.2e-147
WP_007612897.1|1443979_1445638_+|protease	ATP-dependent protease LonB	protease	A0A167RA83	Powai_lake_megavirus	32.7	1.9e-14
WP_014418556.1|1445836_1448161_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	44.2	1.0e-183
WP_003152626.1|1448157_1448745_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_094296067.1|1448777_1449269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003152628.1|1449462_1450830_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_007408154.1|1450837_1451668_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_163094412.1|1451702_1452644_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_014418554.1|1452633_1453413_+	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_029973366.1|1453418_1454393_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_021494394.1|1454421_1455711_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_174532466.1|1455843_1457721_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_163094361.1|1457754_1458777_+|coat	spore coat protein YsxE	coat	NA	NA	NA	NA
WP_003152639.1|1458791_1458983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174532467.1|1459435_1462078_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.3	3.7e-161
WP_094296065.1|1462136_1463429_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_017418284.1|1463569_1464322_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_065180394.1|1464448_1465450_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_065180393.1|1465590_1466160_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_007408165.1|1466191_1466887_+	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_003152647.1|1466978_1467992_+	rod shape-determining protein MreB	NA	NA	NA	NA	NA
WP_016938781.1|1468022_1468886_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_007408167.1|1468882_1469401_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_003152653.1|1469454_1470135_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003152655.1|1470137_1470941_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_017418246.1|1471068_1471872_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_103526720.1|1471864_1472731_+|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003152660.1|1472876_1473185_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_012118103.1|1473187_1473529_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_003152662.1|1473541_1473826_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_014418543.1|1474143_1474722_+	Spo0B domain-containing protein	NA	NA	NA	NA	NA
WP_172870028.1|1474753_1476040_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_007408173.1|1476093_1476537_+	transcriptional regulator ThrR	NA	NA	NA	NA	NA
WP_014418542.1|1476550_1477408_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_014418541.1|1477433_1477976_-	transcription repressor NadR	NA	NA	NA	NA	NA
WP_174532468.1|1477972_1479124_-	IscS subfamily cysteine desulfurase	NA	A0A141ZJV0	Faustovirus	29.6	2.3e-30
WP_072177622.1|1479230_1480796_+	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_038461554.1|1480777_1481626_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_014418538.1|1481627_1482731_+	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_014418537.1|1482857_1484048_+|coat	SafA/ExsA family spore coat assembly protein	coat	NA	NA	NA	NA
>prophage 3
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	1874107	1880360	4010543		Staphylococcus_phage(66.67%)	9	NA	NA
WP_103526779.1|1874107_1875223_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.0	1.1e-53
WP_007409425.1|1875203_1875851_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	44.3	1.5e-39
WP_094296008.1|1875865_1877062_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.4	8.2e-116
WP_003153372.1|1877094_1877559_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	59.3	1.2e-43
WP_003153373.1|1877675_1878050_+	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA	NA
WP_021494254.1|1878115_1878637_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_003153376.1|1878724_1878814_-	YjcZ family sporulation protein	NA	NA	NA	NA	NA
WP_007409427.1|1879021_1879777_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.7	2.9e-10
WP_007409428.1|1879766_1880360_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	36.6	2.6e-14
>prophage 4
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	1957287	2018704	4010543	terminase,protease,integrase,holin,head,capsid,coat,tail,portal,tRNA,plate	Bacillus_phage(41.03%)	75	1966339:1966357	2005385:2005403
WP_003153515.1|1957287_1958580_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	29.5	7.9e-56
WP_003153516.1|1958674_1959373_+	DnaD domain-containing protein	NA	NA	NA	NA	NA
WP_007612187.1|1959391_1960051_+	endonuclease III	NA	NA	NA	NA	NA
WP_012117839.1|1960047_1960539_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032863588.1|1960616_1963400_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_014418235.1|1963438_1964047_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	33.7	1.7e-21
WP_003153525.1|1965093_1965198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014418233.1|1965403_1965649_+	DUF5446 family protein	NA	NA	NA	NA	NA
WP_014418232.1|1965694_1966063_+	YppE family protein	NA	NA	NA	NA	NA
WP_003153532.1|1966101_1966284_-	hypothetical protein	NA	NA	NA	NA	NA
1966339:1966357	attL	TTTTTTCTGTTTTTAAAAA	NA	NA	NA	NA
WP_061862316.1|1966470_1966938_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_007612169.1|1966967_1967381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012117833.1|1967519_1968026_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_014418230.1|1968124_1970371_+	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	26.9	1.6e-08
WP_022553048.1|1970390_1971629_+	ribonuclease H-like domain-containing protein	NA	NA	NA	NA	NA
WP_007409498.1|1971762_1971858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003153539.1|1971941_1972178_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_007409499.1|1972266_1972815_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_003153541.1|1972894_1973194_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_040237997.1|1973727_1974894_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_003153548.1|1974934_1975087_-	YpzG family protein	NA	NA	NA	NA	NA
WP_003153550.1|1975252_1975444_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014721409.1|1975547_1977467_+	ATP-dependent DNA helicase	NA	A0A2P1N0K5	Streptomyces_phage	21.8	1.8e-11
WP_014418224.1|1977578_1979081_+	carboxypeptidase M32	NA	NA	NA	NA	NA
WP_014418223.1|1979413_1979998_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_100261870.1|1979994_1981299_+	purine permease	NA	NA	NA	NA	NA
WP_094295995.1|1981342_1982539_-|integrase	site-specific integrase	integrase	S6C485	Thermus_phage	44.2	1.1e-80
WP_043021753.1|1982901_1983282_-	helix-turn-helix domain-containing protein	NA	A0A0A7RTK4	Clostridium_phage	42.7	3.3e-10
WP_076983071.1|1983453_1983702_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_032863594.1|1983714_1984029_+	hypothetical protein	NA	A0A2H4JDL0	uncultured_Caudovirales_phage	49.3	1.9e-11
WP_047935882.1|1984025_1984754_+	Rha family transcriptional regulator	NA	A0A2H4J4N4	uncultured_Caudovirales_phage	68.3	1.4e-89
WP_014418218.1|1984811_1985384_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J884	uncultured_Caudovirales_phage	56.9	4.7e-61
WP_014418217.1|1985380_1985638_+	hypothetical protein	NA	A0A2H4J4M9	uncultured_Caudovirales_phage	39.8	1.1e-09
WP_014721404.1|1985634_1985832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032859263.1|1985933_1986122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025852621.1|1986118_1987039_+	hypothetical protein	NA	A0A0A7S0A9	Clostridium_phage	64.0	4.5e-90
WP_082029678.1|1987058_1987796_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A2P1JU03	Anoxybacillus_phage	42.4	4.8e-42
WP_032859408.1|1987993_1988695_+	DnaD domain protein	NA	NA	NA	NA	NA
WP_141233183.1|1988579_1989527_+	ATP-binding protein	NA	A6XMI1	Bacillus_virus	50.2	1.9e-54
WP_040221743.1|1989762_1990191_+	RusA family crossover junction endodeoxyribonuclease	NA	S6B1L9	Thermus_phage	65.7	1.7e-44
WP_162918043.1|1990241_1990406_+	hypothetical protein	NA	A0A2H4J4N7	uncultured_Caudovirales_phage	66.0	6.7e-13
WP_025852610.1|1990503_1990707_+	hypothetical protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	70.3	2.8e-21
WP_025852608.1|1990742_1991000_+	hypothetical protein	NA	A0A2H4JA61	uncultured_Caudovirales_phage	40.5	2.5e-06
WP_025852606.1|1991162_1991828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025852602.1|1992075_1992261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174532508.1|1992280_1992796_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1L2JY33	Aeribacillus_phage	43.2	3.0e-27
WP_038458912.1|1992877_1993093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174532509.1|1993171_1994044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038458908.1|1994120_1994300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162839616.1|1994431_1994581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088056584.1|1994843_1995056_+	helix-turn-helix domain-containing protein	NA	A0A1Z1LZP5	Bacillus_phage	42.4	8.4e-08
WP_088056583.1|1995192_1995399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174532510.1|1995704_1996070_+	HNH endonuclease	NA	A0A1U7Q1S7	Geobacillus_virus	55.0	7.9e-30
WP_046341352.1|1996296_1996812_+|terminase	phage terminase small subunit P27 family	terminase	A6M947	Geobacillus_virus	42.3	5.4e-32
WP_038458898.1|1996808_1998518_+|terminase	terminase large subunit	terminase	A0A0S2GLF0	Bacillus_phage	63.1	1.7e-207
WP_174532511.1|1998531_1998702_+	hypothetical protein	NA	Q9ZXF9	Bacillus_phage	60.0	1.0e-08
WP_174532512.1|1998706_1999987_+|portal	phage portal protein	portal	D6R3Y6	Bacillus_phage	63.3	9.6e-155
WP_174532513.1|1999949_2000576_+|head,protease	HK97 family phage prohead protease	head,protease	Q9ZXF7	Bacillus_phage	77.7	2.5e-84
WP_174532514.1|2000614_2001907_+|capsid	phage major capsid protein	capsid	A0A0A7RTL2	Clostridium_phage	48.1	3.1e-92
WP_174532515.1|2001929_2002319_+	collagen-like protein	NA	D6R3Z0	Bacillus_phage	50.0	6.5e-14
WP_014418194.1|2002336_2002639_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0S2GLH6	Bacillus_phage	45.2	3.6e-12
WP_094295980.1|2002628_2002943_+|head	phage head closure protein	head	A0A2H4JCB1	uncultured_Caudovirales_phage	38.2	3.4e-13
WP_043021774.1|2002943_2003342_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_094295979.1|2003338_2003722_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_174532750.1|2003736_2004345_+|tail	phage tail protein	tail	A0A2H4J8F3	uncultured_Caudovirales_phage	35.5	2.9e-24
WP_014418189.1|2004410_2004788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174532516.1|2004984_2009472_+|tail	phage tail tape measure protein	tail	A0A1Q1PVX7	Staphylococcus_phage	32.8	5.5e-64
2005385:2005403	attR	TTTTTTCTGTTTTTAAAAA	NA	NA	NA	NA
WP_038458884.1|2009465_2010305_+|tail	phage tail family protein	tail	D6R3Z9	Bacillus_phage	58.6	8.0e-94
WP_014418186.1|2010319_2012023_+|tail	phage tail protein	tail	D6R400	Bacillus_phage	57.6	2.3e-180
WP_174532517.1|2012076_2014641_+	peptidase G2	NA	D6R401	Bacillus_phage	79.8	0.0e+00
WP_174532518.1|2014655_2016479_+|plate	phage baseplate upper protein	plate	D6R402	Bacillus_phage	35.9	1.7e-80
WP_040221740.1|2016475_2016838_+	hypothetical protein	NA	Q9ZXE0	Bacillus_phage	56.3	4.6e-30
WP_014418183.1|2016837_2017023_+	XkdX family protein	NA	Q9ZXD9	Bacillus_phage	72.1	5.8e-21
WP_040221739.1|2017072_2017495_+|holin	phage holin family protein	holin	D6R405	Bacillus_phage	87.2	3.6e-58
WP_014418181.1|2017540_2018704_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1P8CWN6	Bacillus_phage	49.1	1.2e-68
>prophage 5
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	2364087	2370301	4010543		Bacillus_phage(50.0%)	6	NA	NA
WP_015417523.1|2364087_2365056_-	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.9	8.0e-53
WP_022553310.1|2365362_2366121_+	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	50.0	2.4e-52
WP_014417835.1|2366170_2366791_-	hypothetical protein	NA	A0A127AYS1	Bacillus_phage	48.4	5.4e-47
WP_012117608.1|2366839_2367829_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.0	1.1e-155
WP_174532545.1|2367846_2369949_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	85.5	0.0e+00
WP_014417834.1|2369908_2370301_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	59.1	5.0e-30
>prophage 6
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	2923637	2956062	4010543	terminase,holin,capsid,tail,portal,plate	Bacillus_phage(33.33%)	43	NA	NA
WP_007407257.1|2923637_2924516_-	N-acetylmuramoyl-L-alanine amidase	NA	Q9ZXD7	Bacillus_phage	60.5	3.7e-81
WP_174532596.1|2924529_2924793_-|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	64.4	6.7e-23
WP_021493821.1|2924806_2925070_-	hemolysin XhlA family protein	NA	A0A2H4JD40	uncultured_Caudovirales_phage	65.5	2.1e-24
WP_160216823.1|2925121_2925883_-|portal	phage portal protein	portal	NA	NA	NA	NA
WP_007610833.1|2925939_2926137_-	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	61.8	7.3e-14
WP_017417608.1|2926141_2926513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174532597.1|2926525_2928157_-	hypothetical protein	NA	A0A1P8CWR7	Bacillus_phage	33.5	1.1e-54
WP_003154822.1|2928159_2928432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007407262.1|2928428_2929007_-	YmfQ family protein	NA	A0A2H4J717	uncultured_Caudovirales_phage	31.0	3.1e-12
WP_174532757.1|2928990_2930037_-|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	44.1	1.0e-69
WP_160216822.1|2930029_2930455_-	DUF2634 domain-containing protein	NA	A0A2H4J6K5	uncultured_Caudovirales_phage	35.9	2.5e-11
WP_072177384.1|2930558_2930825_-	DUF2577 family protein	NA	S6C459	Thermus_phage	37.5	2.6e-06
WP_072177383.1|2930824_2931802_-|portal	phage portal protein	portal	A0A1L6BY20	Clostridium_phage	30.2	1.1e-33
WP_007610816.1|2931815_2932475_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	45.3	1.8e-08
WP_174532598.1|2932467_2937351_-	transglycosylase SLT domain-containing protein	NA	A0A1L2JY60	Aeribacillus_phage	46.6	3.2e-41
WP_015239684.1|2937338_2937491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003154836.1|2937532_2937979_-|portal	phage portal protein	portal	A0A0A7RTY8	Clostridium_phage	35.8	1.0e-10
WP_003154837.1|2938053_2938497_-|tail	phage tail tube protein	tail	A0A0K2CNG3	Brevibacillus_phage	45.2	8.4e-26
WP_007610810.1|2938498_2939896_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A0A7RTT5	Clostridium_phage	40.4	9.0e-82
WP_007610809.1|2939895_2940105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029973074.1|2940101_2940548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021494024.1|2940544_2941048_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_021494025.1|2941044_2941401_-	DUF3599 family protein	NA	NA	NA	NA	NA
WP_021494026.1|2941397_2941781_-	DUF3199 family protein	NA	NA	NA	NA	NA
WP_007407274.1|2941797_2942733_-|capsid	phage major capsid protein	capsid	A0A1B1P7E3	Bacillus_phage	62.8	3.3e-104
WP_094295692.1|2942759_2943605_-|portal	phage portal protein	portal	A0A1B1P7E4	Bacillus_phage	58.1	2.5e-55
WP_094296112.1|2943624_2945016_-|portal	phage portal protein	portal	A0A1B1P7C8	Bacillus_phage	55.8	2.3e-138
WP_174532599.1|2945064_2946363_-|terminase	PBSX family phage terminase large subunit	terminase	M4ZRM5	Bacillus_phage	58.9	2.1e-149
WP_022553491.1|2946359_2947157_-|terminase	terminase small subunit	terminase	A0A0S2MVB6	Bacillus_phage	49.4	2.3e-58
WP_174532600.1|2947269_2947782_-	sigma-70 family RNA polymerase sigma factor	NA	A0A0K2CNQ1	Brevibacillus_phage	44.6	2.9e-22
WP_003154859.1|2947888_2948092_-	hypothetical protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	48.5	5.4e-12
WP_014417521.1|2948510_2948687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022553492.1|2948686_2949487_-	ATP-binding protein	NA	A6XMI1	Bacillus_virus	45.3	4.0e-58
WP_046559509.1|2949386_2950214_-|portal	phage portal protein	portal	S6BFM4	Thermus_phage	49.0	1.7e-19
WP_073982154.1|2950203_2950383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003154871.1|2950573_2950912_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	8.4e-18
WP_072177405.1|2951059_2951650_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	3.0e-39
WP_021494033.1|2951671_2952508_-	manganese catalase family protein	NA	NA	NA	NA	NA
WP_021494034.1|2952578_2953181_-	poly-gamma-glutamate hydrolase family protein	NA	A0A0Y0AJU6	Bacillus_phage	48.3	4.6e-43
WP_007610770.1|2953290_2953668_+	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	41.4	1.5e-15
WP_095271584.1|2953705_2954659_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A218KC88	Bacillus_phage	69.3	2.4e-62
WP_003154881.1|2954801_2954936_-	PhrA family phosphatase inhibitor	NA	NA	NA	NA	NA
WP_087920760.1|2954925_2956062_-	S9 family peptidase	NA	A0A1P8CWN8	Bacillus_phage	47.9	1.3e-94
>prophage 7
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	3018728	3036912	4010543	coat,protease	Klosneuvirus(33.33%)	24	NA	NA
WP_003154992.1|3018728_3019115_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_015239584.1|3019152_3019467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020955644.1|3019559_3020060_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_007409090.1|3020210_3020693_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_007409091.1|3020841_3021285_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_174532613.1|3021343_3021937_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_003155001.1|3022028_3022805_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_015417222.1|3022935_3023748_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_174532614.1|3023770_3024781_-	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA	NA
WP_099721942.1|3024777_3025548_-	thiazole synthase	NA	NA	NA	NA	NA
WP_007409096.1|3025544_3025748_-	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_014417430.1|3025744_3026854_-	glycine oxidase ThiO	NA	NA	NA	NA	NA
WP_029973136.1|3026837_3027455_-	thiazole tautomerase TenI	NA	NA	NA	NA	NA
WP_015417218.1|3027432_3028140_-	thiaminase II	NA	NA	NA	NA	NA
WP_029973137.1|3028389_3030234_-	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_029973139.1|3030460_3031210_+	bis(5'-nucleosyl)-tetraphosphatase PrpE	NA	A0A1V0SJW2	Klosneuvirus	26.3	9.9e-11
WP_029973140.1|3031243_3032137_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.3	1.4e-06
WP_003155018.1|3032151_3032952_-	NAD kinase	NA	NA	NA	NA	NA
WP_003155019.1|3032969_3033605_-	GTP diphosphokinase	NA	NA	NA	NA	NA
WP_012117290.1|3033632_3033998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029973141.1|3034122_3034695_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_100261698.1|3034699_3035386_+	lytic transglycosylase domain-containing protein	NA	A0A1P8CWQ1	Bacillus_phage	71.2	7.9e-39
WP_100261697.1|3035614_3036013_+	thiol management oxidoreductase	NA	NA	NA	NA	NA
WP_003155024.1|3036009_3036912_+|protease	protease adaptor protein SpxH	protease	NA	NA	NA	NA
>prophage 8
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	4010543	3522868	3532759	4010543		Synechococcus_phage(50.0%)	9	NA	NA
WP_014417107.1|3522868_3524407_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	50.5	3.3e-77
WP_007408902.1|3524403_3524991_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.8	1.3e-26
WP_029973746.1|3524987_3526028_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.4	4.8e-64
WP_014417105.1|3526119_3527550_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	6.2e-54
WP_029973747.1|3527525_3529754_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	7.2e-158
WP_021495182.1|3529737_3530421_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_017419024.1|3530417_3530672_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	M4QPE7	Synechococcus_phage	34.6	2.1e-05
WP_007609852.1|3530671_3531391_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FUQ7	Synechococcus_phage	44.7	1.3e-47
WP_007408896.1|3531466_3532759_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.3	4.5e-19
