The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP054571	Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome	6806438	63846	71780	6806438	tRNA	Moraxella_phage(33.33%)	9	NA	NA
WP_006388149.1|63846_64434_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	36.8	1.2e-19
WP_024068720.1|64467_64842_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	27.8	1.1e-10
WP_006388151.1|65038_66061_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_006388152.1|66439_66796_+	VOC family protein	NA	NA	NA	NA	NA
WP_006388153.1|66880_68173_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.3	5.4e-65
WP_006388154.1|68281_69313_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.6	1.4e-92
WP_006388155.1|69382_70024_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_020927471.1|70212_70971_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.6	1.5e-67
WP_006388157.1|71015_71780_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	45.2	2.3e-31
>prophage 2
NZ_CP054571	Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome	6806438	1046354	1056512	6806438	holin,tail	uncultured_Mediterranean_phage(28.57%)	15	NA	NA
WP_024069257.1|1046354_1047533_-|tail	tail fiber domain-containing protein	tail	A0A248SL32	Klebsiella_phage	33.2	1.0e-33
WP_024069258.1|1047543_1048017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069259.1|1048013_1048301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207367.1|1048322_1048967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069261.1|1048967_1049258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069262.1|1049257_1050427_-	hypothetical protein	NA	Q08J79	Stx2-converting_phage	38.4	3.4e-18
WP_024069263.1|1050429_1052085_-	hypothetical protein	NA	A0A1B1ITF2	uncultured_Mediterranean_phage	30.0	9.4e-54
WP_049052356.1|1052087_1052396_-|holin	phage holin family protein	holin	A0A0U4J8T9	Pseudomonas_phage	46.2	7.9e-07
WP_024069265.1|1052397_1052745_-	Prophage membrane protein	NA	E5E3W4	Burkholderia_phage	45.4	7.3e-17
WP_058207368.1|1052771_1053212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207369.1|1053211_1054465_-|tail	tail fiber protein	tail	A0A0B5A596	Achromobacter_phage	43.3	1.6e-50
WP_024069266.1|1054468_1054930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069267.1|1054942_1055476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069268.1|1055477_1055867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069269.1|1055870_1056512_-	hypothetical protein	NA	A0A1B1ITG1	uncultured_Mediterranean_phage	34.2	4.6e-25
>prophage 3
NZ_CP054571	Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome	6806438	1076507	1089362	6806438	integrase	Pseudomonas_phage(54.55%)	19	1076952:1076967	1095113:1095128
WP_024069290.1|1076507_1077008_+	hypothetical protein	NA	A0A0S3UG68	Pseudomonas_phage	50.3	5.0e-35
1076952:1076967	attL	CAGCAGGCCGGCCGCG	NA	NA	NA	NA
WP_024069291.1|1077004_1077214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069292.1|1077210_1077495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069293.1|1077491_1077680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069294.1|1077694_1078498_+	PD-(D/E)XK nuclease family protein	NA	J7HXJ4	Pseudomonas_phage	51.0	2.9e-69
WP_024069295.1|1078513_1078735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058207378.1|1078737_1079949_+	hypothetical protein	NA	J7HXB6	Pseudomonas_phage	53.7	1.2e-66
WP_155523072.1|1079964_1081125_+	recombination-associated protein RdgC	NA	A0A218M310	Acidovorax_phage	33.0	2.2e-41
WP_024069298.1|1081134_1082919_+	AAA family ATPase	NA	J7HXJ7	Pseudomonas_phage	36.8	1.8e-82
WP_024069299.1|1082934_1083549_+	3'-5' exonuclease	NA	I3PUZ1	Vibrio_phage	49.7	4.9e-48
WP_049054998.1|1083674_1084040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069301.1|1084036_1084789_+	hypothetical protein	NA	H2BD37	Pseudomonas_phage	41.9	1.3e-18
WP_024069302.1|1084788_1085262_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069303.1|1085264_1085546_+	hypothetical protein	NA	K4JS57	Caulobacter_phage	33.7	8.3e-11
WP_058207379.1|1085549_1086293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069305.1|1086285_1087287_+	phage Gp37/Gp68 family protein	NA	Q8W6R4	Burkholderia_virus	56.1	1.4e-100
WP_058207380.1|1087283_1087931_+	hypothetical protein	NA	O03965	Myxococcus_phage	47.4	2.3e-48
WP_158646888.1|1087932_1088277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024069307.1|1088276_1089362_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A059VF45	Pseudomonas_phage	32.9	4.7e-46
1095113:1095128	attR	CGCGGCCGGCCTGCTG	NA	NA	NA	NA
>prophage 4
NZ_CP054571	Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome	6806438	1376207	1399316	6806438	capsid,terminase,tail,head,protease,portal	uncultured_Caudovirales_phage(29.41%)	24	NA	NA
WP_024069458.1|1376207_1376699_-	hypothetical protein	NA	I6NSS1	Burkholderia_phage	59.3	1.2e-44
WP_058207395.1|1376702_1377146_-	hypothetical protein	NA	A0A0A1IVG1	Pseudomonas_phage	35.3	3.8e-10
WP_058207396.1|1377234_1377963_-	hypothetical protein	NA	A0A0B5A5A1	Achromobacter_phage	51.5	1.5e-64
WP_024069460.1|1378258_1381432_-	host specificity protein J	NA	A4JX16	Burkholderia_virus	47.3	3.8e-277
WP_006387649.1|1381428_1382037_-|tail	tail assembly protein	tail	Q6JIL3	Burkholderia_virus	56.2	2.9e-53
WP_024069462.1|1382040_1382814_-	C40 family peptidase	NA	A4JX14	Burkholderia_virus	51.7	7.7e-67
WP_024069463.1|1382816_1383545_-|tail	phage minor tail protein L	tail	Q6JIL5	Burkholderia_virus	55.3	1.1e-65
WP_145964689.1|1383553_1383784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024069466.1|1385477_1385819_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	54.5	5.7e-30
WP_058207398.1|1385815_1388791_-|tail	phage tail tape measure protein	tail	A0A2H4J9A1	uncultured_Caudovirales_phage	32.9	1.2e-94
WP_158646890.1|1388824_1389136_-	DUF1799 domain-containing protein	NA	NA	NA	NA	NA
WP_024069468.1|1389201_1389621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207400.1|1389693_1390629_-	hypothetical protein	NA	G8CLB2	Synechococcus_phage	40.9	2.9e-60
WP_058207401.1|1390661_1390865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207402.1|1390891_1391314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207403.1|1391310_1391613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020928365.1|1391618_1392623_-|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	42.2	4.1e-68
WP_024069470.1|1392703_1393054_-|head	head decoration protein	head	A0A2H4JF15	uncultured_Caudovirales_phage	49.6	8.7e-18
WP_024069471.1|1393081_1394188_-|protease	Clp protease ClpP	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	36.8	3.3e-47
WP_058207404.1|1394216_1395716_-|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	50.1	4.1e-125
WP_020928369.1|1395712_1395919_-	hypothetical protein	NA	A0A2H4EUL1	Aeromonas_phage	42.6	4.5e-06
WP_024069473.1|1395964_1397959_-|terminase	phage terminase large subunit family protein	terminase	R9TMM4	Vibrio_phage	37.4	2.3e-115
WP_006387630.1|1398036_1398534_-|terminase	terminase small subunit	terminase	NA	NA	NA	NA
WP_024069474.1|1398530_1399316_-	hypothetical protein	NA	A0A1B0Z000	Pseudomonas_phage	39.3	5.7e-33
>prophage 5
NZ_CP054571	Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome	6806438	3254085	3322835	6806438	tail,tRNA	Burkholderia_virus(15.0%)	62	NA	NA
WP_006385759.1|3254085_3254856_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_006385758.1|3254855_3255797_+	prolyl aminopeptidase	NA	NA	NA	NA	NA
WP_006385757.1|3255807_3256008_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_006385756.1|3256287_3256605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006385755.1|3256651_3257098_+	peptidoglycan-binding protein LysM	NA	G3MBQ1	Bacillus_virus	50.7	1.2e-06
WP_020926210.1|3257268_3258675_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_006385753.1|3258781_3259624_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_024070496.1|3259625_3259892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058207501.1|3260102_3260681_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	30.5	1.4e-07
WP_024070498.1|3260698_3261319_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_058207502.1|3261395_3261947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207503.1|3261990_3262527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207504.1|3262622_3263180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058207646.1|3263197_3265165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024070502.1|3265641_3266601_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_024070503.1|3266708_3267740_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2H4UUK0	Bodo_saltans_virus	27.2	6.8e-26
WP_024070504.1|3267745_3269221_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_035182028.1|3269313_3270255_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_058207505.1|3270383_3271742_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_024070506.1|3271738_3273085_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_024070507.1|3273081_3275004_-	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	30.4	1.5e-15
WP_053500861.1|3275135_3275741_-	heme acquisition protein HasAp	NA	NA	NA	NA	NA
WP_081247857.1|3275883_3278925_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_058207506.1|3279171_3280527_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_006385738.1|3280530_3280791_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_024070511.1|3280925_3281945_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_024070512.1|3282017_3282524_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_024070513.1|3282715_3283555_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_058207507.1|3283811_3284828_+	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA	NA
WP_024070515.1|3284824_3285478_+	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA	NA
WP_006391563.1|3285474_3286623_+	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	37.0	3.3e-58
WP_024070516.1|3286655_3287966_+	MFS transporter	NA	NA	NA	NA	NA
WP_006385730.1|3288199_3288910_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	24.5	4.8e-07
WP_024070517.1|3288906_3290295_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_024070518.1|3290305_3291766_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_024070519.1|3291807_3293991_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_006385726.1|3293994_3295194_-	MFS transporter	NA	NA	NA	NA	NA
WP_045952967.1|3295629_3297519_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.4	7.3e-119
WP_058207648.1|3297720_3299124_-	DKNYY domain-containing protein	NA	NA	NA	NA	NA
WP_024070521.1|3299274_3300666_+	purine permease	NA	H9YQ34	environmental_Halophage	49.6	3.7e-27
WP_024070522.1|3301147_3301471_-	YXWGXW repeat-containing protein	NA	NA	NA	NA	NA
WP_006385707.1|3301762_3302779_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	39.0	5.0e-66
WP_006385706.1|3302978_3303260_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_024070524.1|3303606_3304542_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_024070525.1|3304594_3305794_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_006385703.1|3305824_3306643_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	49.3	1.4e-10
WP_024070526.1|3306661_3307591_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006385701.1|3307732_3308329_-|tail	tail assembly protein	tail	C7BGD3	Burkholderia_phage	53.0	1.9e-49
WP_024070527.1|3308325_3308562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024070528.1|3308542_3308914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006385697.1|3312518_3313124_-|tail	tail assembly protein	tail	Q6JIL3	Burkholderia_virus	55.7	1.0e-50
WP_006385696.1|3313120_3313900_-	C40 family peptidase	NA	Q3HQU3	Burkholderia_phage	47.3	1.5e-65
WP_006385695.1|3313902_3314631_-|tail	phage minor tail protein L	tail	Q6JIL5	Burkholderia_virus	58.3	2.2e-71
WP_054499929.1|3314633_3316595_-|tail	tail fiber domain-containing protein	tail	A0A0K0KVF1	Prochlorococcus_phage	36.2	1.9e-13
WP_080684394.1|3316591_3316936_-|tail	phage tail protein	tail	A0A0S2SYI2	Pseudomonas_phage	38.4	4.8e-21
WP_024070535.1|3316932_3318219_-|tail	phage tail tape measure protein	tail	A0A1W6JP49	Morganella_phage	27.2	1.4e-12
WP_006385691.1|3318276_3318567_-	DUF4035 domain-containing protein	NA	S4TND7	Salmonella_phage	50.0	9.1e-13
WP_024070536.1|3318566_3319040_-|tail	Phage tail assembly chaperone	tail	A4JX08	Burkholderia_virus	45.1	4.8e-27
WP_006385689.1|3319045_3319513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102949899.1|3319763_3320333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053497387.1|3320629_3321325_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_024070538.1|3321377_3322835_-	DUF1254 domain-containing protein	NA	M1IA53	Paramecium_bursaria_Chlorella_virus	35.6	2.3e-64
>prophage 6
NZ_CP054571	Achromobacter xylosoxidans strain FDAARGOS_789 chromosome, complete genome	6806438	5997448	6008726	6806438	integrase	Burkholderia_phage(50.0%)	14	5992456:5992471	6008225:6008240
5992456:5992471	attL	GCTGCGGCCGGCGATG	NA	NA	NA	NA
WP_024068262.1|5997448_5997898_+	hypothetical protein	NA	A0A0N7IRF3	Acinetobacter_phage	36.5	1.1e-17
WP_024068263.1|5998075_5999749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049050997.1|5999741_6000341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006388474.1|6000350_6000650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024068265.1|6000669_6001680_+	hypothetical protein	NA	A9YX04	Burkholderia_phage	50.3	1.8e-76
WP_024068266.1|6001714_6002458_+	hypothetical protein	NA	A9YX06	Burkholderia_phage	63.5	2.5e-83
WP_020924456.1|6002466_6002820_+	hypothetical protein	NA	A9YX11	Burkholderia_phage	66.7	6.1e-35
WP_024068267.1|6002816_6003998_+	putative bacteriophage protein	NA	A9YX12	Burkholderia_phage	62.6	5.8e-130
WP_024068268.1|6003999_6004665_+	DUF2612 domain-containing protein	NA	A9YX13	Burkholderia_phage	60.6	9.6e-74
WP_174717674.1|6004679_6005627_+	hypothetical protein	NA	A0A0M3ULD8	Salmonella_phage	54.1	5.8e-16
WP_024068270.1|6006183_6006534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024068271.1|6006536_6007559_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JE37	uncultured_Caudovirales_phage	32.3	2.8e-24
WP_164497481.1|6007714_6008206_+	hypothetical protein	NA	A0A0U5LBV3	unidentified_phage	37.2	6.3e-14
WP_024068272.1|6008195_6008726_+	hypothetical protein	NA	A0A2H4JFP9	uncultured_Caudovirales_phage	57.4	7.0e-43
6008225:6008240	attR	GCTGCGGCCGGCGATG	NA	NA	NA	NA
