The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046113	Enterococcus faecalis strain 092160007-3 chromosome, complete genome	2675479	678434	686354	2675479		Planktothrix_phage(16.67%)	11	NA	NA
WP_002355794.1|678434_679493_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
WP_002355795.1|679492_680449_+	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	3.2e-06
WP_002355796.1|680489_681560_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002355797.1|681959_682481_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355798.1|682594_682795_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002355799.1|682855_683215_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002385048.1|683260_683641_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_002361363.1|683708_684068_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_025187394.1|684135_684630_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002379186.1|684647_685163_+	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	48.8	1.0e-38
WP_002380126.1|685178_686354_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	47.7	3.3e-85
>prophage 2
NZ_CP046113	Enterococcus faecalis strain 092160007-3 chromosome, complete genome	2675479	1043205	1060978	2675479	tail,holin	Enterococcus_phage(46.15%)	18	NA	NA
WP_002357859.1|1043205_1045602_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.1	1.7e-19
WP_002360497.1|1045626_1045977_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002382232.1|1046349_1046835_-	toxin	NA	A0A097BY56	Enterococcus_phage	70.5	4.4e-60
WP_002360496.1|1046869_1047352_-	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	47.7	2.6e-20
WP_002382234.1|1047749_1048505_+	DnaD domain protein	NA	A0A0K0MX39	Streptococcus_phage	56.0	6.7e-31
WP_002379370.1|1048523_1049366_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	31.0	5.7e-31
WP_002360492.1|1049432_1049825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002379371.1|1049844_1050252_+	RinA family phage transcriptional activator	NA	NA	NA	NA	NA
WP_002382237.1|1050473_1050890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002365550.1|1050902_1051415_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	8.8e-35
WP_002357848.1|1051447_1051807_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
WP_002382238.1|1051899_1052193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002382239.1|1052182_1055116_+	membrane protein	NA	A0A1U9WR55	Streptococcus_virus	25.3	6.6e-10
WP_002365553.1|1055117_1056044_+|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	9.0e-147
WP_174776012.1|1056056_1057514_+|tail	phage tail protein	tail	C9E2K6	Enterococcus_phage	47.7	1.6e-174
WP_002379376.1|1057546_1059316_+	hypothetical protein	NA	A0A097BYA8	Enterococcus_phage	71.6	1.5e-142
WP_002357842.1|1059339_1059735_+|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
WP_002382241.1|1059853_1060978_+	SH3 domain-containing protein	NA	A0A139ZVY1	Enterococcus_phage	44.3	3.2e-77
>prophage 3
NZ_CP046113	Enterococcus faecalis strain 092160007-3 chromosome, complete genome	2675479	1482245	1490889	2675479		Synechococcus_phage(50.0%)	9	NA	NA
WP_002364081.1|1482245_1482818_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	9.2e-25
WP_174776021.1|1482814_1483846_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	44.4	1.1e-55
WP_002382407.1|1483847_1485287_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.0	2.1e-49
WP_016633930.1|1485262_1487482_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.9	1.3e-146
WP_002369271.1|1487478_1488153_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002357271.1|1488153_1488405_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002369269.1|1488418_1489132_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3ELR0	Synechococcus_phage	43.0	5.7e-48
WP_002379523.1|1489283_1490408_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002365766.1|1490400_1490889_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	6.4e-19
>prophage 4
NZ_CP046113	Enterococcus faecalis strain 092160007-3 chromosome, complete genome	2675479	2190318	2200059	2675479		Streptococcus_phage(57.14%)	11	NA	NA
WP_002385686.1|2190318_2192502_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	3.1e-286
WP_002356379.1|2192534_2193131_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	6.0e-51
WP_002362328.1|2193175_2194294_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002356377.1|2194419_2195178_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002356375.1|2195161_2195824_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	6.7e-19
WP_002359438.1|2195838_2196711_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.2	1.1e-80
WP_002356372.1|2196823_2197171_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
WP_002356371.1|2197163_2198003_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002389791.1|2198119_2199070_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	6.2e-34
WP_002356367.1|2199071_2199401_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_002356366.1|2199420_2200059_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	2.1e-54
