assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013357865.1_ASM1335786v1	NZ_CP053820	Vibrio cholerae strain SA10G chromosome 1, complete sequence	1	1954857-1955003	1,1	PILER-CR,CRISPRCasFinder	no	csa3,cas6f,cas7f,cas5f	cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f,PrimPol	Type I-A	TTTCTTGGCTGCCTATTCGGCAGAACAC,TTCTTGGCTGCCTATTCGGCAGAACAC	28,27	0	0	NA	NA	NA:NA	2,2	2	TypeI-A	cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f,PrimPol	NA|59aa|up_3|NZ_CP053820.1_1949993_1950170_-,NA|133aa|up_0|NZ_CP053820.1_1954211_1954610_-,NA|228aa|down_4|NZ_CP053820.1_1960199_1960883_-	NA|277aa|up_9|NZ_CP053820.1_1941192_1942023_+	pfam02517, Abi, CAAX protease self-immunity	NA|1072aa|up_8|NZ_CP053820.1_1942112_1945328_-	COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism]	NA|408aa|up_7|NZ_CP053820.1_1945942_1947166_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|166aa|up_6|NZ_CP053820.1_1947210_1947708_-	cd14505, CDKN3-like, cyclin-dependent kinase inhibitor 3 and similar proteins	NA|334aa|up_5|NZ_CP053820.1_1947721_1948723_-	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated	csa3|114aa|up_4|NZ_CP053820.1_1948819_1949161_-	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional	NA|59aa|up_3|NZ_CP053820.1_1949993_1950170_-	NA	NA|990aa|up_2|NZ_CP053820.1_1950166_1953136_-	pfam13191, AAA_16, AAA ATPase domain	NA|136aa|up_1|NZ_CP053820.1_1953391_1953799_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|133aa|up_0|NZ_CP053820.1_1954211_1954610_-	NA	cas6f|213aa|down_0|NZ_CP053820.1_1955099_1955738_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|344aa|down_1|NZ_CP053820.1_1955749_1956781_-	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3	cas5f|696aa|down_2|NZ_CP053820.1_1956787_1958875_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	NA|404aa|down_3|NZ_CP053820.1_1958877_1960089_-	pfam06527, TniQ, TniQ	NA|228aa|down_4|NZ_CP053820.1_1960199_1960883_-	NA	NA|1206aa|down_5|NZ_CP053820.1_1960901_1964519_-	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|392aa|down_6|NZ_CP053820.1_1964553_1965729_-	cd17515, RMtype1_S_MjaORF132P_Sau1132ORF3780P-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to MjaXIP/S	NA|536aa|down_7|NZ_CP053820.1_1965728_1967336_-	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|289aa|down_8|NZ_CP053820.1_1967538_1968405_+	cd10447, GIY-YIG_unchar_2, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria and archaea	NA|461aa|down_9|NZ_CP053820.1_1968401_1969784_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]
GCF_013357865.1_ASM1335786v1	NZ_CP053820	Vibrio cholerae strain SA10G chromosome 1, complete sequence	2	2576678-2576921	2	PILER-CR	no		cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f,PrimPol	Orphan	AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	49	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f,PrimPol	NA,NA	NA|186aa|up_9|NZ_CP053820.1_2568682_2569240_+	COG0762, COG0762, Predicted integral membrane protein [Function unknown]	NA|97aa|up_8|NZ_CP053820.1_2569239_2569530_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|144aa|up_7|NZ_CP053820.1_2569575_2570007_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|201aa|up_6|NZ_CP053820.1_2570076_2570679_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|392aa|up_5|NZ_CP053820.1_2570672_2571848_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|307aa|up_4|NZ_CP053820.1_2571880_2572801_-	PRK00971, PRK00971, glutaminase; Provisional	NA|240aa|up_3|NZ_CP053820.1_2572911_2573631_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|354aa|up_2|NZ_CP053820.1_2573870_2574932_+	PRK10880, PRK10880, adenine DNA glycosylase	NA|91aa|up_1|NZ_CP053820.1_2574945_2575218_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|376aa|up_0|NZ_CP053820.1_2575319_2576447_+	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC	NA|542aa|down_0|NZ_CP053820.1_2577213_2578839_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|285aa|down_1|NZ_CP053820.1_2579885_2580740_-	PRK09430, djlA, co-chaperone DjlA	NA|784aa|down_2|NZ_CP053820.1_2580898_2583250_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|432aa|down_3|NZ_CP053820.1_2583302_2584598_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|331aa|down_4|NZ_CP053820.1_2584587_2585580_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|272aa|down_5|NZ_CP053820.1_2585593_2586409_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|127aa|down_6|NZ_CP053820.1_2586480_2586861_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|270aa|down_7|NZ_CP053820.1_2586871_2587681_+	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|166aa|down_8|NZ_CP053820.1_2587830_2588328_-	pfam00186, DHFR_1, Dihydrofolate reductase	NA|158aa|down_9|NZ_CP053820.1_2588340_2588814_-	PRK09917, PRK09917, threonine/serine exporter
GCF_013357865.1_ASM1335786v1	NZ_CP053820	Vibrio cholerae strain SA10G chromosome 1, complete sequence	3	3001959-3002043	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f,PrimPol	Orphan	CCCCCCCTTGCCACGCATAATTACCCCCC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f,PrimPol	NA|62aa|up_9|NZ_CP053820.1_2988308_2988494_+,NA|90aa|up_8|NZ_CP053820.1_2988571_2988841_+,NA|132aa|up_7|NZ_CP053820.1_2989255_2989651_-,NA|286aa|up_6|NZ_CP053820.1_2989647_2990505_-,NA|204aa|up_3|NZ_CP053820.1_2996540_2997152_+,NA	NA|62aa|up_9|NZ_CP053820.1_2988308_2988494_+	NA	NA|90aa|up_8|NZ_CP053820.1_2988571_2988841_+	NA	NA|132aa|up_7|NZ_CP053820.1_2989255_2989651_-	NA	NA|286aa|up_6|NZ_CP053820.1_2989647_2990505_-	NA	NA|475aa|up_5|NZ_CP053820.1_2990748_2992173_+	pfam06122, TraH, Conjugative relaxosome accessory transposon protein	NA|1135aa|up_4|NZ_CP053820.1_2992176_2995581_+	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|204aa|up_3|NZ_CP053820.1_2996540_2997152_+	NA	NA|178aa|up_2|NZ_CP053820.1_2997154_2997688_+	pfam06252, DUF1018, Protein of unknown function (DUF1018)	NA|920aa|up_1|NZ_CP053820.1_2997784_3000544_+	PRK14876, PRK14876, conjugal transfer mating pair stabilization protein TraN; Provisional	NA|318aa|up_0|NZ_CP053820.1_3000908_3001862_+	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|123aa|down_0|NZ_CP053820.1_3002218_3002587_+	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|408aa|down_1|NZ_CP053820.1_3002583_3003807_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|454aa|down_2|NZ_CP053820.1_3004009_3005371_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|542aa|down_3|NZ_CP053820.1_3005464_3007090_-	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|86aa|down_4|NZ_CP053820.1_3007092_3007350_-	pfam01809, Haemolytic, Haemolytic domain	NA|119aa|down_5|NZ_CP053820.1_3007316_3007673_-	PRK01732, rnpA, ribonuclease P; Reviewed	NA|46aa|down_6|NZ_CP053820.1_3007685_3007823_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|246aa|down_7|NZ_CP053820.1_3008064_3008802_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|224aa|down_8|NZ_CP053820.1_3008798_3009470_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|249aa|down_9|NZ_CP053820.1_3009547_3010294_-	cd13709, PBP2_YxeM, Substrate binding domain of an ABC transporter YxeMNO; the type 2 periplasmic binding protein fold
