The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053744	Vibrio cholerae strain SA3G chromosome 1, complete sequence	3020084	670349	676966	3020084		Staphylococcus_phage(66.67%)	7	NA	NA
WP_000210573.1|670349_671483_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
WP_000366561.1|671494_672745_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	1.5e-99
WP_000543544.1|672844_673294_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_175248741.1|673319_674423_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	2.6e-44
WP_000493874.1|674427_675081_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
WP_001122866.1|675121_676231_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	3.9e-64
WP_000864130.1|676495_676966_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
>prophage 2
NZ_CP053744	Vibrio cholerae strain SA3G chromosome 1, complete sequence	3020084	1536053	1563027	3020084		Vibrio_phage(80.0%)	21	NA	NA
WP_000948763.1|1536053_1536365_+	hypothetical protein	NA	E3U9J1	Vibrio_phage	100.0	6.6e-09
WP_060779833.1|1536499_1536856_+	phage protein	NA	G8IRV3	Vibrio_phage	92.4	7.2e-60
WP_175248902.1|1536942_1537431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064626869.1|1537573_1538050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_156144343.1|1538103_1538310_-	KTSC domain-containing protein	NA	NA	NA	NA	NA
WP_058649093.1|1538319_1538538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032469415.1|1539322_1539508_-	hypothetical protein	NA	G8IRV2	Vibrio_phage	86.9	7.1e-19
WP_175248903.1|1539516_1540884_-	toxin	NA	Q64EV0	Vibrio_phage	96.5	2.4e-257
WP_001160095.1|1540886_1541231_-	DUF2523 domain-containing protein	NA	Q64EV1	Vibrio_phage	100.0	4.8e-61
WP_175248904.1|1541230_1542628_-	hypothetical protein	NA	Q64EV4	Vibrio_phage	94.6	2.3e-162
WP_000672170.1|1542760_1542970_-	hypothetical protein	NA	G8IRU8	Vibrio_phage	81.2	1.1e-20
WP_001900021.1|1543003_1543234_-	hypothetical protein	NA	G8IRU7	Vibrio_phage	94.7	3.9e-35
WP_001284206.1|1543243_1543582_-	DUF1293 domain-containing protein	NA	Q858R2	Vibrio_phage	96.4	1.3e-55
WP_175248905.1|1543586_1544690_-	replication initiation factor domain-containing protein	NA	Q8W6E3	Vibrio_phage	98.4	8.9e-218
WP_175248906.1|1544679_1544883_-	hypothetical protein	NA	E1CJD3	Vibrio_phage	98.5	7.7e-35
WP_114807524.1|1544893_1545142_-	hypothetical protein	NA	O56843	Vibrio_virus	67.1	6.4e-23
WP_000288489.1|1545320_1545677_+	hypothetical protein	NA	Q9MCC3	Vibrio_phage	57.9	3.7e-32
WP_175248907.1|1546000_1559638_-	MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	NA	B3Y8K3	Vibrio_virus	100.0	8.4e-07
WP_071177929.1|1559661_1560123_-	RTX toxin-activating lysine-acyltransferase RtxC	NA	NA	NA	NA	NA
WP_032469422.1|1560148_1560496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175249268.1|1560921_1563027_+	RTX toxin T1SS ABC transporter subunit RtxB	NA	W8CYL7	Bacillus_phage	26.9	1.1e-38
>prophage 3
NZ_CP053744	Vibrio cholerae strain SA3G chromosome 1, complete sequence	3020084	2299912	2307105	3020084		Anguillid_herpesvirus(16.67%)	9	NA	NA
WP_001162850.1|2299912_2300341_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
WP_095488087.1|2300544_2301834_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.3	7.6e-35
WP_000872174.1|2302053_2302248_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_001124187.1|2302296_2302635_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_001196554.1|2302648_2304499_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	7.0e-106
WP_002043422.1|2304522_2305038_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_000301571.1|2305086_2305410_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
WP_000331703.1|2305470_2305854_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_175249083.1|2305890_2307105_-	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	31.1	3.9e-33
>prophage 4
NZ_CP053744	Vibrio cholerae strain SA3G chromosome 1, complete sequence	3020084	2536965	2544204	3020084		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_001279365.1|2536965_2537853_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
WP_175249123.1|2538134_2540723_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.3	2.6e-34
WP_000116735.1|2540816_2541824_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
WP_114710273.1|2541897_2542833_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
WP_057550676.1|2542832_2543459_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.5	5.7e-36
WP_000698379.1|2543451_2544204_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
>prophage 5
NZ_CP053744	Vibrio cholerae strain SA3G chromosome 1, complete sequence	3020084	2666417	2729913	3020084	integrase,tRNA,protease,transposase	Vibrio_phage(20.0%)	48	2663782:2663797	2683812:2683827
2663782:2663797	attL	GCTCACCAATGCCACC	NA	NA	NA	NA
WP_175249152.1|2666417_2668427_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_175249153.1|2668419_2670003_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_000687778.1|2670008_2671181_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000168287.1|2671400_2671934_-	single-stranded DNA-binding protein	NA	R9TR60	Vibrio_phage	90.6	3.8e-57
WP_001188315.1|2672225_2672870_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001920788.1|2673042_2673915_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.2	4.5e-63
WP_175249154.1|2674070_2676893_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.9	0.0e+00
WP_175249155.1|2676957_2678742_+	oligosaccharyltransferase	NA	NA	NA	NA	NA
WP_175248725.1|2678787_2680176_-|transposase	IS4 family transposase	transposase	Q9JMP3	Wolbachia_phage	27.6	1.7e-48
WP_175249156.1|2680333_2681452_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000102982.1|2681915_2683271_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_175249157.1|2683344_2687025_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	83.6	2.0e-24
2683812:2683827	attR	GCTCACCAATGCCACC	NA	NA	NA	NA
WP_000118232.1|2687221_2688556_+	sodium:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	39.8	5.1e-42
WP_102786345.1|2700486_2701245_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA	NA
WP_175249158.1|2701237_2702971_-	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA	NA
WP_175249159.1|2702970_2704794_-	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA	NA
WP_000154955.1|2704900_2705131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001918194.1|2705127_2705286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175249160.1|2705251_2705917_-	TIGR04219 family outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_000971085.1|2706005_2706218_-	envelope stress response protein PspG	NA	NA	NA	NA	NA
WP_001884460.1|2706378_2707362_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_000245564.1|2707719_2708184_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001200951.1|2708193_2708655_+	chemotaxis protein CheX	NA	NA	NA	NA	NA
WP_000004742.1|2708771_2709950_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000916640.1|2710152_2711805_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_001913997.1|2712592_2713678_-	alanine racemase	NA	NA	NA	NA	NA
WP_000774910.1|2713691_2715098_-	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	72.1	5.3e-183
WP_175249161.1|2715268_2716033_+	YdiY family protein	NA	NA	NA	NA	NA
WP_001196054.1|2716094_2716544_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_000090471.1|2716577_2716805_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_000184784.1|2716820_2717123_-	primosomal replication protein N	NA	NA	NA	NA	NA
WP_001216668.1|2717130_2717499_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000675497.1|2717710_2718187_-	bacterioferritin	NA	NA	NA	NA	NA
WP_001884452.1|2718256_2718445_-	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_000031644.1|2718748_2719933_-	elongation factor Tu	NA	M4M9V7	Vibrio_phage	60.5	5.8e-05
WP_000101804.1|2720055_2722152_-	elongation factor G	NA	A0A1S5SF82	Streptococcus_phage	26.1	1.3e-55
WP_001138050.1|2722227_2722698_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_000201237.1|2722813_2723188_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000902450.1|2723372_2723648_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_001044894.1|2723657_2724014_-	sulfurtransferase complex subunit TusC	NA	NA	NA	NA	NA
WP_000803700.1|2724010_2724406_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	40.7	1.9e-16
WP_000140991.1|2724402_2725119_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_175249162.1|2725323_2726103_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_175249290.1|2726287_2727223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001890311.1|2727234_2727453_+	SlyX family protein	NA	NA	NA	NA	NA
WP_000084201.1|2727493_2727682_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_001228766.1|2727742_2728723_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_000312460.1|2728725_2729913_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
>prophage 6
NZ_CP053744	Vibrio cholerae strain SA3G chromosome 1, complete sequence	3020084	2867548	2874224	3020084		Enterobacteria_phage(50.0%)	7	NA	NA
WP_154025630.1|2867548_2868838_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	2.0e-14
WP_154025631.1|2868827_2869640_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_154025632.1|2869636_2870194_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	59.8	1.6e-53
WP_175249201.1|2870193_2871084_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.9	1.5e-37
WP_069212354.1|2871080_2871959_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.2	6.4e-110
WP_175249202.1|2871982_2873047_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.9	4.7e-99
WP_000587803.1|2873285_2874224_+	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	35.2	2.1e-34
>prophage 1
NZ_CP053745	Vibrio cholerae strain SA3G chromosome 2, complete sequence	1159698	177361	289534	1159698	integrase,transposase,protease,plate,tail,capsid,head,terminase,portal	Vibrio_phage(69.39%)	100	197227:197244	225428:225445
WP_175249337.1|177361_178576_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_175249338.1|178675_180094_-	tryptophanase	NA	NA	NA	NA	NA
WP_071908331.1|180565_180637_-	tryptophanase leader peptide	NA	NA	NA	NA	NA
WP_000462094.1|180874_181087_+	DUF3820 family protein	NA	NA	NA	NA	NA
WP_001236184.1|181156_181639_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_175249660.1|182183_184181_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_000078819.1|184426_184639_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	62.9	1.8e-18
WP_000181878.1|184915_185632_-	SIMPL domain-containing protein	NA	NA	NA	NA	NA
WP_175249339.1|185792_187445_-	BatD family protein	NA	NA	NA	NA	NA
WP_175249340.1|187438_189274_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_001893128.1|189275_190232_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_000665196.1|190218_190707_-	DUF4381 domain-containing protein	NA	NA	NA	NA	NA
WP_175249341.1|190703_191636_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_175249342.1|191639_192596_-	MoxR family ATPase	NA	NA	NA	NA	NA
WP_175249343.1|192897_194814_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.6	4.8e-25
WP_000997601.1|194873_195074_+	chromosome segregation ATPase	NA	NA	NA	NA	NA
WP_033927757.1|195349_196003_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000986003.1|196649_197858_+	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
197227:197244	attL	TGATTGCAGCGAGTTTCA	NA	NA	NA	NA
WP_114719933.1|198108_199341_+	peptidase T	NA	NA	NA	NA	NA
WP_000400695.1|199511_200387_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_175249344.1|200383_201976_-	nitric oxide reductase transcriptional regulator NorR	NA	NA	NA	NA	NA
WP_084981331.1|202167_203352_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_000106983.1|203496_203706_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	68.3	5.7e-17
WP_000792010.1|204064_204292_+	alternative ribosome-rescue factor A	NA	NA	NA	NA	NA
WP_000765283.1|204679_205057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000407070.1|205330_205570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000009679.1|205656_206661_+	response regulator	NA	NA	NA	NA	NA
WP_000880547.1|206660_207107_+	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_175249345.1|207156_208629_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000935709.1|208617_209613_-	2-hydroxyacid dehydrogenase	NA	M1HUW8	Acanthocystis_turfacea_Chlorella_virus	42.4	2.1e-69
WP_170826474.1|209855_211139_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_000779165.1|211140_211983_-	potassium channel family protein	NA	A0A1B0Y2S3	Lactobacillus_phage	44.0	7.5e-07
WP_000251270.1|212048_212597_-	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_001217709.1|213241_214285_+	GMP reductase	NA	A0A0N9Q9A5	Chrysochromulina_ericina_virus	53.6	1.8e-98
WP_175249346.1|214886_215636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175249661.1|215992_217024_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S6L016	Salmonella_phage	54.1	7.3e-97
WP_175249347.1|217203_218316_+	ATP-binding protein	NA	A0A2K9R7H3	Dishui_lake_phycodnavirus	26.9	1.2e-20
WP_175249348.1|218312_220493_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_175249349.1|220919_222212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175249350.1|222457_223102_-	helix-turn-helix domain-containing protein	NA	A0A166YHA0	Vibrio_phage	60.7	5.3e-69
WP_061051021.1|223250_223463_+	hypothetical protein	NA	U3PFJ1	Vibrio_phage	80.0	1.4e-23
WP_175249351.1|223573_224113_+	phage regulatory CII family protein	NA	U3PIJ8	Vibrio_phage	99.4	2.7e-95
WP_175249352.1|224125_224560_+	hypothetical protein	NA	U3PDF0	Vibrio_phage	97.9	1.2e-72
WP_158128809.1|224641_225160_+	hypothetical protein	NA	U3PB56	Vibrio_phage	75.9	3.7e-57
WP_001198812.1|225159_225387_+	hypothetical protein	NA	U3PIK2	Vibrio_phage	61.3	2.6e-23
WP_061051025.1|225585_225873_-	hypothetical protein	NA	NA	NA	NA	NA
225428:225445	attR	TGAAACTCGCTGCAATCA	NA	NA	NA	NA
WP_175249353.1|225911_228497_+	replication endonuclease	NA	A0A166YHE2	Vibrio_phage	98.5	0.0e+00
WP_172877807.1|228696_228915_+	hypothetical protein	NA	Q8HA55	Vibrio_phage	98.6	2.8e-30
WP_175249354.1|228909_229161_-	ogr/Delta-like zinc finger family protein	NA	Q8HA63	Vibrio_phage	97.6	3.6e-42
WP_175249355.1|229277_229781_-	type II toxin-antitoxin system YafO family toxin	NA	NA	NA	NA	NA
WP_175249356.1|230360_231035_+	Bro-N domain-containing protein	NA	Q8HA44	Vibrio_phage	88.9	1.1e-112
WP_175249357.1|231031_232054_-|portal	phage portal protein	portal	U3PFK6	Vibrio_phage	93.2	6.8e-188
WP_172527527.1|232050_233871_-|terminase	terminase ATPase subunit family protein	terminase	U3PIL1	Vibrio_phage	97.5	0.0e+00
WP_175249358.1|234044_234935_+|capsid	GPO family capsid scaffolding protein	capsid	R9TRS3	Vibrio_phage	67.5	5.0e-86
WP_175249359.1|234934_235936_+|capsid	phage major capsid protein, P2 family	capsid	R9TPZ5	Vibrio_phage	61.9	2.0e-107
WP_175249360.1|235946_236378_+	hypothetical protein	NA	U3PCG2	Vibrio_phage	53.5	1.5e-48
WP_000494022.1|236484_236946_+|head	head completion/stabilization protein	head	U3PFL1	Vibrio_phage	99.3	5.8e-78
WP_000122190.1|236942_237431_+|tail	phage tail protein	tail	U3PIL4	Vibrio_phage	95.7	2.7e-86
WP_175249361.1|237417_238077_+	phage virion morphogenesis protein	NA	U3PDG7	Vibrio_phage	98.6	2.9e-115
WP_114793011.1|238078_239188_+	DUF2586 family protein	NA	U3PB71	Vibrio_phage	99.7	4.5e-209
WP_000063626.1|239187_239646_+	DUF2597 family protein	NA	U3PCG7	Vibrio_phage	98.0	1.1e-81
WP_000382491.1|239660_239870_+	TraR/DksA family transcriptional regulator	NA	U3PFL5	Vibrio_phage	100.0	2.0e-33
WP_001077689.1|239866_240094_+	hypothetical protein	NA	U3PIL8	Vibrio_phage	100.0	2.1e-36
WP_175249362.1|240080_240668_+	lysozyme	NA	U3PDH1	Vibrio_phage	99.0	2.8e-109
WP_175249363.1|240642_240984_+	hypothetical protein	NA	U3PB75	Vibrio_phage	94.7	1.6e-48
WP_001892969.1|241033_241195_+	hypothetical protein	NA	A0A166YHN7	Vibrio_phage	98.1	3.7e-24
WP_000165786.1|241191_241473_+	hypothetical protein	NA	A9ZT39	Vibrio_virus	100.0	5.1e-45
WP_175249364.1|241669_243487_+|tail	phage tail tape measure protein	tail	U3PFL8	Vibrio_phage	81.3	5.0e-266
WP_001113003.1|243476_243809_+	DUF2590 family protein	NA	U3PIM1	Vibrio_phage	100.0	1.7e-55
WP_175249365.1|243805_245005_+|plate	baseplate J/gp47 family protein	plate	U3PDH5	Vibrio_phage	98.7	1.6e-220
WP_175249366.1|245001_245661_+|tail	phage tail protein	tail	U3PB79	Vibrio_phage	98.2	2.2e-123
WP_175249367.1|245657_247061_+|tail	phage tail protein	tail	Q8HA60	Vibrio_phage	54.4	1.9e-164
WP_175249368.1|247060_247585_+|tail	phage tail protein	tail	Q8HA51	Vibrio_phage	92.0	1.2e-87
WP_175249369.1|247587_248481_+	hypothetical protein	NA	U3PIM3	Vibrio_phage	94.9	6.2e-153
WP_000457681.1|248468_248942_+	hypothetical protein	NA	U3PDI0	Vibrio_phage	100.0	6.6e-77
WP_175249370.1|248938_250570_+	hypothetical protein	NA	A0A160DHT6	Vibrio_phage	95.8	4.6e-303
WP_000019966.1|251863_252136_-	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA	NA
WP_000118579.1|253571_254594_+	DUF4118 domain-containing protein	NA	W8CYF6	Bacillus_phage	22.9	7.4e-09
WP_175249371.1|254596_255295_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	32.6	8.6e-25
WP_175249372.1|256747_257401_+	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_175249373.1|259224_259893_-	epimerase	NA	NA	NA	NA	NA
WP_175249374.1|260051_260612_-	phosphohydrolase	NA	NA	NA	NA	NA
WP_175249375.1|260765_261671_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_175249376.1|261865_262732_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_102787165.1|263586_264981_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.4	1.3e-48
WP_000967523.1|265170_266499_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_000400328.1|266749_267580_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	47.4	2.4e-58
WP_000717539.1|267682_268210_+	nicotinate-nicotinamide nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_000362854.1|268405_269947_+	DUF3369 domain-containing protein	NA	NA	NA	NA	NA
WP_175249377.1|270004_271951_-	ATP-binding protein	NA	W8CYF6	Bacillus_phage	24.4	7.3e-05
WP_032477646.1|272200_273175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001046717.1|273252_274833_-	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_001276502.1|275236_276442_-	multidrug efflux MFS transporter EmrD	NA	NA	NA	NA	NA
WP_000949610.1|276694_276961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000746869.1|278150_279407_-	thermolabile hemolysin	NA	NA	NA	NA	NA
WP_175249378.1|280378_282604_+	cytolysin VCC	NA	NA	NA	NA	NA
WP_000586206.1|282904_284551_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.4	3.3e-22
WP_175249379.1|284898_285837_+	triacylglycerol lipase	NA	NA	NA	NA	NA
WP_175249380.1|285846_286701_+	lipase secretion chaperone	NA	NA	NA	NA	NA
WP_175249381.1|286777_289534_-|protease	M6 family metalloprotease PrtV	protease	NA	NA	NA	NA
>prophage 2
NZ_CP053745	Vibrio cholerae strain SA3G chromosome 2, complete sequence	1159698	499950	509201	1159698		Vibrio_phage(90.91%)	13	NA	NA
WP_043990497.1|499950_500307_+	phage protein	NA	G8IRV3	Vibrio_phage	93.2	1.4e-60
WP_057562864.1|500373_501072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057562865.1|501197_502118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057562866.1|503099_504467_-	toxin	NA	Q64EV0	Vibrio_phage	98.5	4.9e-258
WP_001160095.1|504469_504814_-	DUF2523 domain-containing protein	NA	Q64EV1	Vibrio_phage	100.0	4.8e-61
WP_148553389.1|504813_506151_-	hypothetical protein	NA	G8IRU9	Vibrio_phage	60.2	1.5e-49
WP_000672170.1|506283_506493_-	hypothetical protein	NA	G8IRU8	Vibrio_phage	81.2	1.1e-20
WP_175249458.1|506526_506757_-	hypothetical protein	NA	G8IRU7	Vibrio_phage	93.4	1.1e-34
WP_001284206.1|506766_507105_-	DUF1293 domain-containing protein	NA	Q858R2	Vibrio_phage	96.4	1.3e-55
WP_001112192.1|507109_508213_-	replication initiation factor domain-containing protein	NA	Q64EV8	Vibrio_phage	100.0	1.5e-220
WP_000502184.1|508202_508406_-	hypothetical protein	NA	C3W4P3	Vibrio_phage	100.0	2.7e-35
WP_057562869.1|508416_508665_-	hypothetical protein	NA	O56843	Vibrio_virus	67.1	8.3e-23
WP_175249459.1|508832_509201_+	hypothetical protein	NA	G8IRV4	Vibrio_phage	84.7	8.2e-51
>prophage 3
NZ_CP053745	Vibrio cholerae strain SA3G chromosome 2, complete sequence	1159698	861077	880592	1159698	holin	Vibrio_phage(37.5%)	24	NA	NA
WP_113622214.1|861077_861290_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	58.6	2.4e-15
WP_175249558.1|861596_863813_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.5	5.7e-62
WP_175249559.1|863945_865421_-	ATPase	NA	M4MHC7	Vibrio_phage	34.5	8.2e-41
WP_057573322.1|865420_865681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000115809.1|865683_866061_-	hypothetical protein	NA	A0A1I9KFD7	Aeromonas_phage	45.0	1.4e-18
WP_175249560.1|866064_866715_-	hypothetical protein	NA	A0A1I9KFE8	Aeromonas_phage	44.2	7.5e-39
WP_071187003.1|866714_867056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175249561.1|867096_867459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175249562.1|867463_869440_-	DUF1983 domain-containing protein	NA	A0A2L1IV54	Escherichia_phage	33.7	3.9e-54
WP_175249563.1|869439_871047_-	hypothetical protein	NA	A0A1I9KFD2	Aeromonas_phage	45.6	2.3e-129
WP_175249673.1|871118_873623_-	right-handed parallel beta-helix repeat-containing protein	NA	A0A240EWW2	Vibrio_phage	31.2	2.3e-19
WP_175249564.1|873637_874267_-	hypothetical protein	NA	A0A1I9KFD0	Aeromonas_phage	33.3	1.1e-23
WP_175249565.1|874266_874866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032474119.1|874868_875333_-	hypothetical protein	NA	A0A1I9KFH0	Aeromonas_phage	55.7	2.1e-27
WP_061050733.1|875390_875771_-	hypothetical protein	NA	M4MCI2	Vibrio_phage	31.1	1.8e-08
WP_000207893.1|875785_876991_-	DUF4043 family protein	NA	A0A088CC32	Shigella_phage	58.3	2.7e-135
WP_175249566.1|877053_878058_-	ATPase	NA	A0A1I9KFD1	Aeromonas_phage	32.3	1.2e-22
WP_069217411.1|878175_878436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000228309.1|878447_879026_-	hypothetical protein	NA	A0A1V0E8A2	Vibrio_phage	36.9	7.9e-24
WP_000835319.1|879028_879250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001007095.1|879344_879521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175242382.1|879525_879684_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000460725.1|879693_880212_-	hypothetical protein	NA	Q6VT55	Vibrio_phage	62.6	1.0e-59
WP_001128531.1|880280_880592_-|holin	phage holin family protein	holin	R9TR41	Vibrio_phage	47.4	2.2e-20
>prophage 4
NZ_CP053745	Vibrio cholerae strain SA3G chromosome 2, complete sequence	1159698	890751	900862	1159698	terminase,portal	Vibrio_phage(57.14%)	10	NA	NA
WP_113622070.1|890751_892839_-|portal	portal protein	portal	A0A088CE71	Shigella_phage	58.2	1.5e-202
WP_175249568.1|892835_894533_-|terminase	terminase	terminase	B0FEF1	Escherichia_phage	65.6	8.9e-217
WP_175249569.1|894525_895371_-	hypothetical protein	NA	A0A2R2Z334	Escherichia_phage	25.7	3.2e-13
WP_175249570.1|895484_896303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088132550.1|896366_897335_-	helix-turn-helix domain-containing protein	NA	R9TPU9	Vibrio_phage	58.7	9.9e-96
WP_175249571.1|897965_898202_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E8C7	Vibrio_phage	70.1	9.6e-21
WP_000781499.1|898320_898986_+	helix-turn-helix domain-containing protein	NA	A0A1V0E8B5	Vibrio_phage	60.1	3.8e-70
WP_175249572.1|899205_899469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000083581.1|899474_899663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001899819.1|899638_900862_+	DUF3596 domain-containing protein	NA	R9TMP3	Vibrio_phage	76.4	2.7e-183
