assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900009115.1_BN2877	NZ_LN890335	Achromobacter xylosoxidans isolate AX_NCIMB_11015_WG chromosome BN2877	1	32301-32410	1	CRISPRCasFinder	no		DEDDh,DinG,WYL,csa3,PD-DExK	Orphan	TTTTTTGCCGCCGGGCCGCCCCAAGGCAAAA	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,WYL,csa3,PD-DExK	NA,NA	NA|283aa|up_9|NZ_LN890335.1_14601_15450_-	cd10969, CE4_Ecf1_like_5s, Putative catalytic NodB homology domain of a hypothetical protein Ecf1 from Escherichia coli and similar proteins	NA|364aa|up_8|NZ_LN890335.1_15446_16538_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|1164aa|up_7|NZ_LN890335.1_16537_20029_-	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|300aa|up_6|NZ_LN890335.1_20158_21058_+	NF033391, lipid_A_LpxO, lipid A hydroxylase LpxO	NA|432aa|up_5|NZ_LN890335.1_21130_22426_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|578aa|up_4|NZ_LN890335.1_22434_24168_-	COG4986, COG4986, ABC-type anion transport system, duplicated permease component [Inorganic ion transport and metabolism]	NA|1304aa|up_3|NZ_LN890335.1_24338_28250_-	TIGR01967, ATP-dependent_RNA_helicase_HrpA, RNA helicase HrpA	NA|453aa|up_2|NZ_LN890335.1_28416_29775_+	PRK05279, PRK05279, N-acetylglutamate synthase; Validated	NA|91aa|up_1|NZ_LN890335.1_29893_30166_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|651aa|up_0|NZ_LN890335.1_30301_32254_+	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type	NA|242aa|down_0|NZ_LN890335.1_32504_33230_-	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|227aa|down_1|NZ_LN890335.1_33386_34067_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|555aa|down_2|NZ_LN890335.1_34103_35768_-	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional	NA|510aa|down_3|NZ_LN890335.1_35822_37352_-	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|460aa|down_4|NZ_LN890335.1_37540_38920_-	COG1322, COG1322, Predicted nuclease of restriction endonuclease-like fold, RmuC family [General function prediction only]	NA|245aa|down_5|NZ_LN890335.1_39085_39820_+	pfam10707, YrbL-PhoP_reg, PhoP regulatory network protein YrbL	NA|242aa|down_6|NZ_LN890335.1_39856_40582_-	PRK00802, PRK00802, DNA-3-methyladenine glycosylase	NA|119aa|down_7|NZ_LN890335.1_40586_40943_-	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC	NA|270aa|down_8|NZ_LN890335.1_40939_41749_-	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|307aa|down_9|NZ_LN890335.1_41745_42666_-	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional
GCF_900009115.1_BN2877	NZ_LN890335	Achromobacter xylosoxidans isolate AX_NCIMB_11015_WG chromosome BN2877	2	3003513-3003589	2	CRISPRCasFinder	no	WYL,csa3	DEDDh,DinG,WYL,csa3,PD-DExK	Type I-A	CCGACGGTGGCCTGGCGGCCGAA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,WYL,csa3,PD-DExK	NA|266aa|up_8|NZ_LN890335.1_2994920_2995718_+,NA|148aa|up_7|NZ_LN890335.1_2995778_2996222_-,NA|122aa|up_6|NZ_LN890335.1_2996398_2996764_+,NA	NA|217aa|up_9|NZ_LN890335.1_2993846_2994497_-	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional	NA|266aa|up_8|NZ_LN890335.1_2994920_2995718_+	NA	NA|148aa|up_7|NZ_LN890335.1_2995778_2996222_-	NA	NA|122aa|up_6|NZ_LN890335.1_2996398_2996764_+	NA	WYL|335aa|up_5|NZ_LN890335.1_2996783_2997788_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|203aa|up_4|NZ_LN890335.1_2997904_2998513_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|442aa|up_3|NZ_LN890335.1_2998526_2999852_-	cd16390, ParB_N_Srx_like, uncharacterized family distantly related to the N-terminal domain of the ParB/Srx superfamily	csa3|233aa|up_2|NZ_LN890335.1_2999991_3000690_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|389aa|up_1|NZ_LN890335.1_3000728_3001895_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|263aa|up_0|NZ_LN890335.1_3001985_3002774_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|394aa|down_0|NZ_LN890335.1_3004147_3005329_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|262aa|down_1|NZ_LN890335.1_3005620_3006406_-	COG3346, COG3346, Uncharacterized conserved protein [Function unknown]	NA|133aa|down_2|NZ_LN890335.1_3006410_3006809_-	COG3125, CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]	NA|214aa|down_3|NZ_LN890335.1_3006805_3007447_-	TIGR02842, Cytochrome_bo3_ubiquinol_oxidase_subunit_3, cytochrome o ubiquinol oxidase, subunit III	NA|668aa|down_4|NZ_LN890335.1_3007439_3009443_-	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I	NA|348aa|down_5|NZ_LN890335.1_3009514_3010558_-	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|445aa|down_6|NZ_LN890335.1_3010782_3012117_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|339aa|down_7|NZ_LN890335.1_3012172_3013189_-	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold	NA|443aa|down_8|NZ_LN890335.1_3013233_3014562_-	cd00610, OAT_like, Acetyl ornithine aminotransferase family	NA|300aa|down_9|NZ_LN890335.1_3014721_3015621_+	PRK10082, PRK10082, hypochlorite stress DNA-binding transcriptional regulator HypT
GCF_900009115.1_BN2877	NZ_LN890335	Achromobacter xylosoxidans isolate AX_NCIMB_11015_WG chromosome BN2877	3	3691203-3691317	3	CRISPRCasFinder	no		DEDDh,DinG,WYL,csa3,PD-DExK	Orphan	GGGGGCAGCGACCCGCGCAGCGGCGGAGCGTGGGG	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,WYL,csa3,PD-DExK	NA,NA|105aa|down_8|NZ_LN890335.1_3699335_3699650_+,NA|56aa|down_9|NZ_LN890335.1_3699771_3699939_-	NA|305aa|up_9|NZ_LN890335.1_3680733_3681648_+	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|651aa|up_8|NZ_LN890335.1_3681990_3683943_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|184aa|up_7|NZ_LN890335.1_3683963_3684515_+	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|326aa|up_6|NZ_LN890335.1_3684678_3685656_+	PRK05246, PRK05246, glutathione synthetase; Provisional	NA|134aa|up_5|NZ_LN890335.1_3685673_3686075_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|90aa|up_4|NZ_LN890335.1_3686185_3686455_+	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|565aa|up_3|NZ_LN890335.1_3686579_3688274_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|413aa|up_2|NZ_LN890335.1_3688490_3689729_-	PRK10666, PRK10666, ammonium transporter AmtB	NA|113aa|up_1|NZ_LN890335.1_3689760_3690099_-	pfam00543, P-II, Nitrogen regulatory protein P-II	NA|145aa|up_0|NZ_LN890335.1_3690641_3691076_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|84aa|down_0|NZ_LN890335.1_3691363_3691615_+	pfam04380, BMFP, Membrane fusogenic activity	NA|516aa|down_1|NZ_LN890335.1_3691700_3693248_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|66aa|down_2|NZ_LN890335.1_3693694_3693892_+	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|120aa|down_3|NZ_LN890335.1_3693909_3694269_+	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|341aa|down_4|NZ_LN890335.1_3694346_3695369_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|806aa|down_5|NZ_LN890335.1_3695382_3697800_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|113aa|down_6|NZ_LN890335.1_3697803_3698142_+	PRK00285, ihfA, integration host factor subunit alpha; Reviewed	NA|144aa|down_7|NZ_LN890335.1_3698199_3698631_+	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|105aa|down_8|NZ_LN890335.1_3699335_3699650_+	NA	NA|56aa|down_9|NZ_LN890335.1_3699771_3699939_-	NA
GCF_900009115.1_BN2877	NZ_LN890335	Achromobacter xylosoxidans isolate AX_NCIMB_11015_WG chromosome BN2877	4	6022518-6022620	4	CRISPRCasFinder	no		DEDDh,DinG,WYL,csa3,PD-DExK	Orphan	TTTTCATCGCCGAGCCGCCTCAAGAT	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,WYL,csa3,PD-DExK	NA,NA	NA|149aa|up_9|NZ_LN890335.1_6006725_6007172_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|256aa|up_8|NZ_LN890335.1_6009747_6010515_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|734aa|up_7|NZ_LN890335.1_6010576_6012778_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|325aa|up_6|NZ_LN890335.1_6013062_6014037_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|303aa|up_5|NZ_LN890335.1_6014154_6015063_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|320aa|up_4|NZ_LN890335.1_6015073_6016033_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|480aa|up_3|NZ_LN890335.1_6016090_6017530_-	PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated	NA|270aa|up_2|NZ_LN890335.1_6017598_6018408_-	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR	NA|310aa|up_1|NZ_LN890335.1_6018525_6019455_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|902aa|up_0|NZ_LN890335.1_6019761_6022467_+	PRK09277, PRK09277, aconitate hydratase AcnA	NA|321aa|down_0|NZ_LN890335.1_6022637_6023600_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|296aa|down_1|NZ_LN890335.1_6023752_6024640_-	cd08460, PBP2_DntR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold	NA|500aa|down_2|NZ_LN890335.1_6024743_6026243_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|361aa|down_3|NZ_LN890335.1_6026293_6027376_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|510aa|down_4|NZ_LN890335.1_6027375_6028905_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|235aa|down_5|NZ_LN890335.1_6028940_6029645_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|297aa|down_6|NZ_LN890335.1_6029680_6030571_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|258aa|down_7|NZ_LN890335.1_6030611_6031385_-	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|401aa|down_8|NZ_LN890335.1_6031629_6032832_+	pfam11062, DUF2863, Protein of unknown function (DUF2863)	NA|372aa|down_9|NZ_LN890335.1_6032841_6033957_+	pfam10093, EarP, Elongation-Factor P (EF-P) rhamnosyltransferase EarP
