The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LN890655	Candidatus Promineofilum breve strain Cfx-K chromosome I	3989163	2567626	2611315	3989163	tail,holin,integrase,capsid	Bifidobacterium_phage(50.0%)	47	2570058:2570075	2614807:2614824
WP_095043607.1|2567626_2567938_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_095043608.1|2567938_2568925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913090.1|2569031_2569250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913091.1|2569249_2569417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913092.1|2569557_2570178_+	hypothetical protein	NA	NA	NA	NA	NA
2570058:2570075	attL	GACGAAGCCGACGCCGGG	NA	NA	NA	NA
WP_157913093.1|2570209_2570650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043612.1|2570663_2571788_+|capsid	major capsid protein	capsid	NA	NA	NA	NA
WP_157913094.1|2571798_2572071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913095.1|2572251_2572590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043615.1|2572586_2573009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913096.1|2572995_2573385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913097.1|2573381_2573750_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_095043617.1|2573805_2574225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913098.1|2574256_2574604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043619.1|2574656_2575118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043620.1|2575216_2575699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_102136592.1|2575809_2576022_+	DUF4035 domain-containing protein	NA	NA	NA	NA	NA
WP_095043622.1|2576089_2584525_+|tail	phage tail tape measure protein	tail	I3NL90	Bifidobacterium_phage	30.1	7.0e-28
WP_095043623.1|2584521_2586390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913099.1|2586449_2587094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043625.1|2587103_2587376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913100.1|2587397_2588570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913101.1|2588644_2589841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043628.1|2589837_2590389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913102.1|2590398_2590725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043630.1|2590717_2591245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043631.1|2591314_2592943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043632.1|2592980_2593415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043633.1|2593787_2594495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043634.1|2594550_2594799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043635.1|2595168_2596242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043636.1|2596358_2597039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043637.1|2597105_2597558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043638.1|2597600_2598041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043639.1|2598123_2598357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095043640.1|2598371_2599280_-	DNA adenine methylase	NA	A0A068CCE6	Rhizobium_phage	41.4	5.0e-49
WP_162292482.1|2599276_2600701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162292483.1|2600837_2601731_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095043643.1|2602144_2602507_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_095043644.1|2603048_2604827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043645.1|2604944_2605736_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_095043646.1|2605757_2607083_+	ferric reductase-like transmembrane domain-containing protein	NA	NA	NA	NA	NA
WP_095043647.1|2607096_2607795_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043648.1|2607822_2608380_+	YqhA family protein	NA	NA	NA	NA	NA
WP_095043649.1|2608376_2609762_+	DUF2252 domain-containing protein	NA	NA	NA	NA	NA
WP_095043650.1|2609947_2610475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095043651.1|2610709_2611315_+|holin	phage holin family protein	holin	NA	NA	NA	NA
2614807:2614824	attR	CCCGGCGTCGGCTTCGTC	NA	NA	NA	NA
>prophage 1
NZ_LN890656	Candidatus Promineofilum breve strain Cfx-K chromosome II	1004044	10894	18166	1004044		Bacillus_phage(66.67%)	7	NA	NA
WP_095044945.1|10894_11587_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	28.7	2.1e-23
WP_095044946.1|11593_13093_-	DUF4118 domain-containing protein	NA	W8CYF6	Bacillus_phage	24.1	1.1e-16
WP_095044947.1|13089_13587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095044948.1|13704_14487_+	nucleotidyltransferase domain-containing protein	NA	A0A2D1GQQ2	Pseudomonas_phage	38.5	1.3e-32
WP_095044949.1|14679_15405_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.1	2.0e-40
WP_162292525.1|15394_16786_+	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	30.8	4.1e-26
WP_095044951.1|17095_18166_+	PstS family phosphate ABC transporter substrate-binding protein	NA	A0A1B1IWY0	uncultured_Mediterranean_phage	28.6	5.4e-18
>prophage 2
NZ_LN890656	Candidatus Promineofilum breve strain Cfx-K chromosome II	1004044	776923	806001	1004044	protease,tail,plate	Acidianus_tailed_spindle_virus(33.33%)	25	NA	NA
WP_095045513.1|776923_777667_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_095045514.1|777694_778246_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095045515.1|778319_778511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095045516.1|778813_779062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095045517.1|779404_780253_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA	NA
WP_157913370.1|780442_781351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162292539.1|781354_785080_-	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_162292540.1|785057_785354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913371.1|785317_787993_-	ATP-binding protein	NA	A0A125SJ49	Acidianus_tailed_spindle_virus	40.2	1.9e-11
WP_095045520.1|787989_790095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045521.1|790094_791618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045522.1|791626_793120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045523.1|793127_794375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157913372.1|794403_795876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102136619.1|795894_798015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045526.1|798022_799960_-|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
WP_095045527.1|799969_800359_-	GPW/gp25 family protein	NA	A0A0F7LDQ1	Escherichia_phage	30.5	2.2e-06
WP_095045528.1|800389_800779_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_095045529.1|800795_801377_-|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_095045530.1|801377_802511_-	phage late control D family protein	NA	NA	NA	NA	NA
WP_095045531.1|802507_803206_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_095045532.1|803272_803470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045533.1|803490_803931_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_095045534.1|803923_805555_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	J9PVC2	Bacillus_phage	27.8	1.3e-39
WP_095045535.1|805560_806001_-|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 3
NZ_LN890656	Candidatus Promineofilum breve strain Cfx-K chromosome II	1004044	925157	975717	1004044	tail,transposase,protease	uncultured_Mediterranean_phage(12.5%)	32	NA	NA
WP_095045621.1|925157_930986_-|tail	lamin tail domain-containing protein	tail	NA	NA	NA	NA
WP_095045622.1|931300_932521_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	26.8	5.6e-19
WP_157913384.1|933109_934552_+|protease	serine protease	protease	Q6JPG5	Neodiprion_lecontei_nucleopolyhedrovirus	34.1	3.8e-27
WP_095045624.1|934935_936846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095045625.1|937202_938018_+	VOC family protein	NA	NA	NA	NA	NA
WP_095045626.1|938199_939996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045627.1|940549_941080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045629.1|941319_942981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045630.1|943305_943524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095045631.1|943558_944896_-|transposase	transposase	transposase	A0A218MNH3	uncultured_virus	29.4	3.9e-18
WP_095045632.1|945121_945394_-	DUF433 domain-containing protein	NA	NA	NA	NA	NA
WP_095045633.1|945672_946767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045634.1|946989_947682_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_095045635.1|947841_949056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095045636.1|949240_951313_-	PD40 domain-containing protein	NA	R9TGS6	Vibrio_phage	34.6	1.7e-23
WP_095045637.1|951501_951873_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_095045638.1|951865_952855_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095045639.1|953356_954328_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_095045640.1|954421_955411_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_157913385.1|955906_956527_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_095045642.1|956820_958527_-	restriction endonuclease	NA	A0A2L1IZ21	Streptomyces_phage	46.6	9.8e-139
WP_095045643.1|958641_959670_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_095045644.1|959801_961505_+	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_095045645.1|961598_962027_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	28.2	1.9e-06
WP_095045646.1|962236_962977_+	AAA family ATPase	NA	Q8JL10	Natrialba_phage	26.8	6.0e-08
WP_095045647.1|963180_965700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095045648.1|965663_965888_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157913386.1|966022_968734_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
WP_157913387.1|969119_971696_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
WP_095045651.1|972391_973645_+	DEAD/DEAH box helicase	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	31.8	1.3e-47
WP_095045652.1|973969_974674_+	N-acyl homoserine lactonase family protein	NA	NA	NA	NA	NA
WP_095045364.1|974727_975717_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_LN890657	Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence	40759	26580	34646	40759	terminase	Gordonia_phage(14.29%)	8	NA	NA
WP_095045735.1|26580_28278_-	hypothetical protein	NA	A0A142K9R3	Gordonia_phage	26.8	3.5e-27
WP_157913397.1|28267_29737_-	hypothetical protein	NA	A0A1B0XTI8	Freshwater_phage	33.9	2.4e-53
WP_157913398.1|29739_31311_-|terminase	terminase	terminase	Q775B9	Bordetella_phage	43.8	6.1e-103
WP_095045738.1|31288_31885_-|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	55.6	4.2e-12
WP_095045739.1|31891_32251_-	DNA adenine methylase	NA	Q5QF26	Pseudomonas_virus	48.2	5.8e-17
WP_157913399.1|32448_32658_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_095045740.1|32668_33589_+	PriCT-2 domain-containing protein	NA	A0A2D1GMG5	Marinobacter_phage	44.4	2.6e-21
WP_157913400.1|33572_34646_+	AAA family ATPase	NA	A0A1B1ITP1	uncultured_Mediterranean_phage	25.9	4.0e-05
