The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT576034	Propionibacterium freudenreichii isolate PFRJS18 chromosome I	2661974	97089	151916	2661974	integrase,transposase	Catovirus(12.5%)	43	141307:141366	158125:158934
WP_097797666.1|97089_98124_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_060762991.1|98259_98979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013162133.1|99210_100014_+	deoxyribonuclease IV	NA	NA	NA	NA	NA
WP_097797667.1|100010_102017_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	25.5	5.5e-48
WP_097797668.1|102056_103676_-	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_097797669.1|103800_104598_-	TIM barrel protein	NA	NA	NA	NA	NA
WP_048769427.1|105089_106112_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_013162128.1|106302_106875_+	isochorismatase family protein	NA	A0A2K9L2K0	Tupanvirus	34.9	6.0e-16
WP_060760794.1|107255_108275_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_097797670.1|108410_109322_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_055343547.1|109487_110399_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013162124.1|110480_111461_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_036941071.1|111516_112290_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	1.9e-33
WP_129931190.1|112866_113610_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_080970534.1|113743_117214_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_080970532.1|117389_117965_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_048768652.1|118062_118518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048768655.1|118514_119024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048768657.1|119287_120196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_097797671.1|120485_122057_-	recombinase family protein	NA	NA	NA	NA	NA
WP_080713542.1|122740_123607_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_044636551.1|123864_125991_-	NAD(+) synthase	NA	NA	NA	NA	NA
WP_013162120.1|126158_127352_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_172952082.1|127451_127901_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_036941015.1|128193_129204_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_013162117.1|129209_130553_+	gluconate transporter	NA	NA	NA	NA	NA
WP_013162116.1|130666_131578_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
WP_157761745.1|131785_132076_+	MFS transporter	NA	NA	NA	NA	NA
WP_027587600.1|135710_136292_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	36.8	4.2e-17
WP_013162108.1|136288_137068_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_013162109.1|137064_137397_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097797673.1|137756_138239_+	Hsp20 family protein	NA	NA	NA	NA	NA
WP_097797674.1|138491_138956_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_080516165.1|139112_141080_-	KUP/HAK/KT family potassium transporter	NA	A7K9V6	Acanthocystis_turfacea_chlorella_virus	31.2	6.3e-73
141307:141366	attL	GGCTCATCATAATCCACGGTGTAGCTGAGGTCTGAACCCGCCGGTTTCGAGGAGGGATCT	NA	NA	NA	NA
WP_027587610.1|145568_146117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027587609.1|146512_147670_+|transposase	IS30-like element ISPfr16 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.9	1.5e-42
WP_027587608.1|147631_147940_-|transposase	transposase	transposase	A0A1B3AZF8	Gordonia_phage	59.1	3.5e-23
WP_013162090.1|147945_148122_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_171035545.1|148395_148695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165363491.1|148771_148936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013162093.1|150046_150571_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_129931493.1|150630_150978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052809198.1|150974_151916_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0K2CP59	Brevibacillus_phage	24.2	1.8e-17
158125:158934	attR	AGATCCCTCCTCGAAACCGGCGGGTTCAGACCTCAGCTACACCGTGGATTATGATGAGCCGGTATTCACAGATGCCCATCGTGCGCTCTGTCAGGCACAAGCCGGGTCAGGCCGCTTCGCCGGCGGAGGCTGCGTCCCATCCCTCAAAGATGATGGATCCCCAGTGGAGGCAGGGGTACCGGCTCGTTGCCGAAAACGGCCTCTTGTTCGATCTGCAGGTTGCCTGGTGGCACATGCGGGAGGCCGTGGACCTCGCGCGCAGCTACCCGCAGCAAACCATCATCGTCAACCACGCGGCGCTTCCGTCGGACAGGTCCCCGGAGATGATGCAGGGCTGGAGCAGGGCCGTCCACGAGCTTGCGGCGTGTCAGAACACCGTGATGAAGATCTCGGGCATCGGGTTGCCGAGCGTGCCGTGGCGGGCGGAGAACAACCGACTGATCGTGGAGACGCTGTTCGAGGCTTTCGGATCCCAACGAATCATGTTCGCTTCGAACTTCCCGGTGGACTCCCTGTGCGGATCCTATGACGACATCTTCGGAGGATTCCTGGAGATCTCCCGGGACTGGTCTCCCGATGAACAGAGCGATGCATTCATCGGGACCGCGGTGAGGACGTATGGGCTCGAAGAATCGTTGCTGTCGCGGGTGGCAGCCCCCGCCCGGGCGTATGGCACCGAAACTTCGAGGCCGTGAGCCATTGAACACATGATCCCGATGGGGCCACGGATTGTGGCCCACGCGTCGGGAACGCATCAATTCCCACAAGACCAACAGGTCGGACCATTGGCGGTTCGGCTCCCTCTCATCC	NA	NA	NA	NA
>prophage 2
NZ_LT576034	Propionibacterium freudenreichii isolate PFRJS18 chromosome I	2661974	2189859	2218144	2661974	protease,transposase	Mycobacterium_phage(40.0%)	26	NA	NA
WP_157761795.1|2189859_2190861_+|transposase	IS481-like element ISPfr17 family transposase	transposase	NA	NA	NA	NA
WP_080774510.1|2190870_2191536_+	O-methyltransferase	NA	NA	NA	NA	NA
WP_157761796.1|2191774_2192776_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080774510.1|2192785_2193451_+	O-methyltransferase	NA	NA	NA	NA	NA
WP_157761797.1|2193689_2194691_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_097780733.1|2194687_2195935_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_044636261.1|2196032_2197250_+	glycogen synthase	NA	NA	NA	NA	NA
WP_013161485.1|2197427_2197595_-	DUF3117 domain-containing protein	NA	NA	NA	NA	NA
WP_013161486.1|2197654_2198047_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_044636262.1|2198069_2199518_-	chloride channel protein	NA	NA	NA	NA	NA
WP_036942487.1|2199609_2200452_-	TIGR00730 family Rossman fold protein	NA	A0A1D8KUT5	Synechococcus_phage	37.3	6.7e-24
WP_013161489.1|2200607_2201696_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_013161490.1|2201795_2202734_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_013161491.1|2202740_2203586_+	hypothetical protein	NA	A0A222YZS8	Streptomyces_phage	48.4	5.7e-23
WP_013161492.1|2203613_2204705_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
WP_013161493.1|2204701_2205022_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_013161494.1|2205257_2206226_+	D-glycerate dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	31.8	8.0e-29
WP_013161495.1|2206389_2207814_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_097797874.1|2208138_2208420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080899069.1|2208547_2210017_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_055346098.1|2210672_2211980_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	71.0	5.5e-182
WP_157761799.1|2212112_2213558_+	DUF1906 domain-containing protein	NA	NA	NA	NA	NA
WP_013160219.1|2213611_2214028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_044635852.1|2214272_2215583_+|transposase	ISL3-like element ISPfr18 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	69.8	4.5e-176
WP_013160214.1|2217021_2217549_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_097797876.1|2217706_2218144_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
NZ_LT576034	Propionibacterium freudenreichii isolate PFRJS18 chromosome I	2661974	2484610	2539310	2661974	holin,transposase	Mycobacterium_phage(50.0%)	54	NA	NA
WP_044635852.1|2484610_2485921_-|transposase	ISL3-like element ISPfr18 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	69.8	4.5e-176
WP_013160219.1|2486165_2486582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097797937.1|2486635_2488651_-	DUF1906 domain-containing protein	NA	NA	NA	NA	NA
WP_044635816.1|2488631_2489666_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_048734242.1|2491958_2492468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026138135.1|2492913_2494239_+|transposase	ISL3-like element ISPfr2 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	77.0	3.6e-197
WP_044636483.1|2494394_2495585_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_157761810.1|2495677_2495842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097784151.1|2495869_2497249_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_055346288.1|2497550_2497754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_055344227.1|2497891_2498674_+	DUF4375 domain-containing protein	NA	NA	NA	NA	NA
WP_097797938.1|2498688_2499285_+	DUF1697 domain-containing protein	NA	NA	NA	NA	NA
WP_080774570.1|2499441_2500341_-	MFS transporter	NA	NA	NA	NA	NA
WP_157761811.1|2500295_2501063_-	MFS transporter	NA	NA	NA	NA	NA
WP_060761736.1|2502339_2503320_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_048735361.1|2505169_2506606_+	MFS transporter	NA	NA	NA	NA	NA
WP_013162175.1|2506734_2507187_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_013162176.1|2507198_2507438_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_013162177.1|2507539_2508106_-	single-stranded DNA-binding protein	NA	A0A173G9V2	Propionibacterium_phage	61.7	5.5e-54
WP_036942745.1|2508286_2508574_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_013162180.1|2509420_2509717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013162181.1|2509788_2510148_-	inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_013162182.1|2510738_2511419_-	chlorite dismutase family protein	NA	NA	NA	NA	NA
WP_013162183.1|2511643_2512027_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_013162184.1|2512175_2512907_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_172952699.1|2513152_2514862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_097797941.1|2514828_2516184_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	72.2	1.7e-186
WP_060761131.1|2516107_2516362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044657636.1|2516408_2517503_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_013160019.1|2517565_2518129_-	DUF3618 domain-containing protein	NA	NA	NA	NA	NA
WP_097797942.1|2518125_2518539_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_097797943.1|2518535_2519222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097797944.1|2519395_2519935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_055344660.1|2520024_2520327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155489236.1|2520319_2520928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155489237.1|2520995_2521217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097776160.1|2521288_2522439_-|transposase	IS3-like element ISPfr10 family transposase	transposase	S5WIU1	Leptospira_phage	37.5	8.6e-38
WP_129931514.1|2522501_2522834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165363493.1|2523384_2523528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157761813.1|2523538_2524177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157761814.1|2524321_2524801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157761815.1|2524785_2525454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097797948.1|2525450_2526377_-	class C sortase	NA	NA	NA	NA	NA
WP_097798025.1|2526588_2528064_-	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA	NA
WP_157761816.1|2528241_2530728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097797950.1|2530827_2531918_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.4	4.5e-36
WP_055345845.1|2532097_2532364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138428099.1|2532481_2532970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_097798026.1|2533129_2534339_+|transposase	IS3-like element ISPfr11 family transposase	transposase	A0A1B1P773	Bacillus_phage	26.7	4.7e-18
WP_097784151.1|2534921_2536301_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_080713571.1|2536444_2537389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157761608.1|2537407_2537635_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_063493589.1|2537657_2537966_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_097797951.1|2538002_2539310_-|transposase	ISL3-like element ISPfr1 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	67.8	2.0e-168
