The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT604076	Streptococcus thermophilus strain ACA-DC 2 chromosome I	1731838	587316	597265	1731838		Streptococcus_phage(85.71%)	9	NA	NA
WP_004197422.1|587316_588318_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_014608125.1|588376_588574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087009786.1|588679_589444_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_002950249.1|589458_590574_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	99.6	8.9e-157
WP_087009787.1|590612_591068_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	82.8	2.9e-66
WP_011225708.1|591275_592580_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	99.5	3.2e-246
WP_002947233.1|593079_595266_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	99.2	0.0e+00
WP_002950251.1|595427_596591_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	99.5	5.9e-220
WP_087009788.1|596587_597265_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	99.6	1.3e-121
>prophage 2
NZ_LT604076	Streptococcus thermophilus strain ACA-DC 2 chromosome I	1731838	748058	762336	1731838	transposase,protease	Streptococcus_phage(25.0%)	17	NA	NA
WP_087009855.1|748058_748712_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.9	2.2e-62
WP_002950528.1|748711_749155_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	55.6	7.9e-40
WP_087009856.1|749147_749864_+	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	47.7	1.2e-61
WP_087009857.1|749983_750475_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	56.3	8.1e-46
WP_087009858.1|751294_751483_+|protease	serine protease	protease	NA	NA	NA	NA
WP_023909583.1|751687_752458_+	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_087009859.1|752438_753329_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.1	4.3e-05
WP_014621467.1|753325_754300_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	73.8	4.0e-137
WP_002945081.1|754296_755208_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	7.1e-104
WP_087009860.1|755225_755372_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_157659033.1|755394_755976_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_087009861.1|755982_756219_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_087009862.1|756518_756725_+	cold shock domain-containing protein	NA	Q9AZD3	Lactococcus_phage	47.8	3.0e-10
WP_011681063.1|757004_757205_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	89.4	2.9e-26
WP_087009863.1|757537_758713_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	27.4	3.1e-35
WP_087009864.1|758833_760969_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.7	2.4e-65
WP_087009865.1|761160_762336_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	9.1e-35
>prophage 3
NZ_LT604076	Streptococcus thermophilus strain ACA-DC 2 chromosome I	1731838	1281961	1289703	1731838		Streptococcus_phage(83.33%)	9	NA	NA
WP_011226366.1|1281961_1283914_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	45.7	9.8e-143
WP_024703964.1|1283914_1284475_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_014608597.1|1284560_1285256_-	LrgB family protein	NA	NA	NA	NA	NA
WP_087010086.1|1285248_1285623_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_087010087.1|1285902_1286256_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	63.2	3.4e-38
WP_022097011.1|1286290_1286785_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	45.1	1.9e-34
WP_087010088.1|1286842_1288021_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	79.1	2.2e-177
WP_087010089.1|1288039_1288597_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	57.9	4.1e-54
WP_011227455.1|1288608_1289703_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	81.5	7.4e-172
>prophage 4
NZ_LT604076	Streptococcus thermophilus strain ACA-DC 2 chromosome I	1731838	1369491	1427147	1731838	tRNA,bacteriocin,transposase,protease	Bacillus_virus(28.57%)	58	NA	NA
WP_087010126.1|1369491_1371591_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	39.7	3.2e-123
WP_022096463.1|1372305_1373397_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_022096462.1|1373403_1374150_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011227491.1|1374468_1374822_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_087010127.1|1374845_1375436_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_065972527.1|1375432_1376065_-	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	31.0	2.1e-17
WP_002951701.1|1376168_1376486_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_087010128.1|1376724_1377843_-	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
WP_002951705.1|1377842_1378370_-	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA	NA
WP_087010129.1|1378506_1379421_-	EamA family transporter	NA	NA	NA	NA	NA
WP_011226448.1|1379497_1379881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002946582.1|1379978_1381421_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_087010130.1|1381420_1382887_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002884769.1|1382886_1383189_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_041827766.1|1383328_1383583_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_002951711.1|1383595_1383805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172838697.1|1384120_1385533_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_084829818.1|1385714_1386224_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_041828318.1|1386235_1387084_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002946999.1|1387207_1387759_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.3	2.6e-24
WP_002951720.1|1387821_1388607_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002951721.1|1388866_1390081_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002946987.1|1390435_1390888_+	universal stress protein	NA	NA	NA	NA	NA
WP_172838681.1|1391709_1391883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041828320.1|1391943_1392318_-	membrane protein	NA	NA	NA	NA	NA
WP_002946980.1|1392529_1393330_-	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.8	2.9e-24
WP_157821721.1|1393517_1393646_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_087010131.1|1394319_1395651_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_087010132.1|1395763_1396546_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	7.7e-14
WP_087010133.1|1397164_1399231_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_011226461.1|1399239_1399482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226462.1|1399478_1400027_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	44.1	3.5e-37
WP_011226463.1|1400023_1400968_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	48.3	8.6e-36
WP_022096499.1|1401052_1402129_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_011226465.1|1402106_1402604_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	28.8	8.3e-14
WP_087010134.1|1402637_1403186_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011226467.1|1403327_1404248_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.0	4.7e-87
WP_087010135.1|1404313_1404538_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_087010136.1|1404752_1405496_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.9	3.8e-31
WP_087010270.1|1405495_1406284_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_087010137.1|1406629_1407460_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002947030.1|1407958_1408192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087010138.1|1408489_1409593_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002947035.1|1409871_1412181_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.4	1.1e-111
WP_087010139.1|1413301_1414057_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_087010140.1|1414053_1414704_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.1	1.2e-20
WP_087010141.1|1414906_1415863_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011681560.1|1415862_1416618_-	peptidase	NA	NA	NA	NA	NA
WP_014608659.1|1416899_1417262_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002951781.1|1417348_1418212_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	34.4	3.9e-27
WP_087010142.1|1418332_1420600_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_002951783.1|1420679_1421060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157659046.1|1421184_1421448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197070.1|1421769_1422066_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_087010143.1|1422230_1423157_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_087009847.1|1423350_1424920_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_087010144.1|1425066_1425321_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_084829836.1|1426940_1427147_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_LT604076	Streptococcus thermophilus strain ACA-DC 2 chromosome I	1731838	1551226	1589509	1731838	tRNA,bacteriocin,transposase,protease	Streptococcus_phage(22.22%)	38	NA	NA
WP_011681659.1|1551226_1552369_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.4	2.7e-84
WP_149036660.1|1552622_1553093_-|transposase	IS200/IS605 family transposase	transposase	A0A0A8WIU6	Clostridium_phage	31.1	1.2e-09
WP_002953513.1|1553273_1553408_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_087010184.1|1554296_1555346_-	protein jag	NA	NA	NA	NA	NA
WP_002953525.1|1555357_1556164_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_002953528.1|1556278_1556614_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_087010185.1|1556698_1558084_-	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_002953531.1|1558412_1559612_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_002953532.1|1560512_1561967_-|tRNA	glutamate--tRNA ligase	tRNA	A0A2K9L481	Tupanvirus	30.3	6.9e-08
WP_002946412.1|1563292_1563982_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002953535.1|1564081_1564507_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002953536.1|1564678_1565032_+	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_024704233.1|1565123_1565621_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_087010186.1|1566547_1567909_-	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_002947069.1|1568086_1568533_-	dUTP diphosphatase	NA	Q332E8	Clostridium_botulinum_C_phage	50.7	8.5e-34
WP_172838685.1|1569369_1569726_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	55.1	8.3e-32
WP_172838686.1|1569792_1570518_+	DUF438 domain-containing protein	NA	NA	NA	NA	NA
WP_042798905.1|1571539_1571995_+	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_087010187.1|1572226_1573249_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_087010188.1|1573267_1574182_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.5	5.9e-74
WP_087009847.1|1574275_1575845_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_011226604.1|1575914_1576589_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011226605.1|1576579_1577107_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_087010189.1|1577175_1578309_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA	NA
WP_002951996.1|1578387_1579086_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_011681672.1|1580040_1580874_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002945733.1|1581242_1581410_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_087010191.1|1581805_1582324_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_011226610.1|1583084_1583477_-	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	49.2	8.8e-27
WP_064355726.1|1583682_1583910_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_087010192.1|1583924_1584956_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_002952017.1|1585089_1585713_-|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_002945230.1|1585722_1586037_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_087010193.1|1586033_1586318_-	DUF4651 domain-containing protein	NA	NA	NA	NA	NA
WP_002952022.1|1586417_1587485_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
WP_011226616.1|1587500_1588271_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	36.1	2.8e-32
WP_087010194.1|1588300_1588963_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_087010195.1|1589065_1589509_-|protease	CAAX protease	protease	NA	NA	NA	NA
>prophage 6
NZ_LT604076	Streptococcus thermophilus strain ACA-DC 2 chromosome I	1731838	1709376	1724948	1731838	tRNA	Streptococcus_phage(30.0%)	15	NA	NA
WP_087010229.1|1709376_1710006_-	hypothetical protein	NA	Q4Z8Z7	Staphylococcus_phage	64.8	9.5e-23
WP_011226701.1|1710245_1710800_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XCL7	Enterococcus_phage	42.2	3.1e-25
WP_065972708.1|1711103_1711898_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002947774.1|1711890_1712733_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	2.1e-17
WP_002947776.1|1712708_1713539_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	4.5e-20
WP_087010230.1|1713551_1714094_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_002947779.1|1714106_1714964_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_087010231.1|1715022_1716300_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.3	5.6e-22
WP_087010232.1|1716301_1717552_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	39.9	1.0e-92
WP_087010233.1|1717629_1718007_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	68.4	1.7e-22
WP_087010234.1|1718009_1719110_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_011227627.1|1719278_1720760_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	6.8e-96
WP_087010235.1|1720936_1721959_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011227628.1|1722386_1723259_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	33.9	3.7e-33
WP_002946814.1|1723325_1724948_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.5	1.4e-46
