assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900120345.1_PRJEB18024	NZ_LT635479	Lachnoclostridium phocaeense strain Marseille-P3177T chromosome contig00001	1	1498379-1498613	1	CRISPRCasFinder	no	Cas14u_CAS-V,c2c4_V-U1	csa3,RT,cas3,DinG,c2c10_CAS-V-U3,c2c4_V-U1,Cas14u_CAS-V,cas14j,DEDDh,csn2,cas2,cas1,cas9,WYL	Unclear	CACTTGACACCCGTGTAAATCTTCATAGGTCTCAAAC	37	0	0	NA	NA	NA	3	3	Unclear	csa3,RT,cas3,DinG,c2c10_CAS-V-U3,c2c4_V-U1,Cas14u_CAS-V,cas14j,DEDDh,csn2,cas2,cas1,cas9,WYL	c2c4_V-U1|492aa|up_9|NZ_LT635479.1_1491559_1493035_-,NA|134aa|up_8|NZ_LT635479.1_1493238_1493640_-,NA|127aa|up_7|NZ_LT635479.1_1493734_1494115_-,NA|52aa|up_6|NZ_LT635479.1_1494161_1494317_-,NA|88aa|up_4|NZ_LT635479.1_1495645_1495909_-,NA|159aa|up_3|NZ_LT635479.1_1495931_1496408_-,NA|72aa|up_2|NZ_LT635479.1_1496652_1496868_-,NA|166aa|up_1|NZ_LT635479.1_1496928_1497426_-,NA|149aa|up_0|NZ_LT635479.1_1497796_1498243_-,NA|475aa|down_3|NZ_LT635479.1_1500996_1502421_+,NA|84aa|down_4|NZ_LT635479.1_1502477_1502729_-,NA|82aa|down_6|NZ_LT635479.1_1503233_1503479_-,NA|143aa|down_7|NZ_LT635479.1_1503622_1504051_-,c2c4_V-U1|492aa|down_8|NZ_LT635479.1_1504263_1505739_-,NA|97aa|down_9|NZ_LT635479.1_1505789_1506080_-	c2c4_V-U1|492aa|up_9|NZ_LT635479.1_1491559_1493035_-	NA	NA|134aa|up_8|NZ_LT635479.1_1493238_1493640_-	NA	NA|127aa|up_7|NZ_LT635479.1_1493734_1494115_-	NA	NA|52aa|up_6|NZ_LT635479.1_1494161_1494317_-	NA	NA|244aa|up_5|NZ_LT635479.1_1494585_1495317_-	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase	NA|88aa|up_4|NZ_LT635479.1_1495645_1495909_-	NA	NA|159aa|up_3|NZ_LT635479.1_1495931_1496408_-	NA	NA|72aa|up_2|NZ_LT635479.1_1496652_1496868_-	NA	NA|166aa|up_1|NZ_LT635479.1_1496928_1497426_-	NA	NA|149aa|up_0|NZ_LT635479.1_1497796_1498243_-	NA	NA|280aa|down_0|NZ_LT635479.1_1498756_1499596_-	pfam14279, HNH_5, HNH endonuclease	NA|146aa|down_1|NZ_LT635479.1_1500050_1500488_-	cd00719, GIY-YIG_SF, GIY-YIG nuclease domain superfamily	NA|82aa|down_2|NZ_LT635479.1_1500554_1500800_-	smart00290, ZnF_UBP, Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger	NA|475aa|down_3|NZ_LT635479.1_1500996_1502421_+	NA	NA|84aa|down_4|NZ_LT635479.1_1502477_1502729_-	NA	NA|173aa|down_5|NZ_LT635479.1_1502725_1503244_-	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins	NA|82aa|down_6|NZ_LT635479.1_1503233_1503479_-	NA	NA|143aa|down_7|NZ_LT635479.1_1503622_1504051_-	NA	c2c4_V-U1|492aa|down_8|NZ_LT635479.1_1504263_1505739_-	NA	NA|97aa|down_9|NZ_LT635479.1_1505789_1506080_-	NA
GCF_900120345.1_PRJEB18024	NZ_LT635479	Lachnoclostridium phocaeense strain Marseille-P3177T chromosome contig00001	2	1499869-1499972	2	CRISPRCasFinder	no	Cas14u_CAS-V,c2c4_V-U1	csa3,RT,cas3,DinG,c2c10_CAS-V-U3,c2c4_V-U1,Cas14u_CAS-V,cas14j,DEDDh,csn2,cas2,cas1,cas9,WYL	Unclear	CACTTGACACCCGTGTAAATCTTCATAGGTCTCAAAC	37	0	0	NA	NA	NA	1	1	Unclear	csa3,RT,cas3,DinG,c2c10_CAS-V-U3,c2c4_V-U1,Cas14u_CAS-V,cas14j,DEDDh,csn2,cas2,cas1,cas9,WYL	NA|134aa|up_9|NZ_LT635479.1_1493238_1493640_-,NA|127aa|up_8|NZ_LT635479.1_1493734_1494115_-,NA|52aa|up_7|NZ_LT635479.1_1494161_1494317_-,NA|88aa|up_5|NZ_LT635479.1_1495645_1495909_-,NA|159aa|up_4|NZ_LT635479.1_1495931_1496408_-,NA|72aa|up_3|NZ_LT635479.1_1496652_1496868_-,NA|166aa|up_2|NZ_LT635479.1_1496928_1497426_-,NA|149aa|up_1|NZ_LT635479.1_1497796_1498243_-,NA|475aa|down_2|NZ_LT635479.1_1500996_1502421_+,NA|84aa|down_3|NZ_LT635479.1_1502477_1502729_-,NA|82aa|down_5|NZ_LT635479.1_1503233_1503479_-,NA|143aa|down_6|NZ_LT635479.1_1503622_1504051_-,c2c4_V-U1|492aa|down_7|NZ_LT635479.1_1504263_1505739_-,NA|97aa|down_8|NZ_LT635479.1_1505789_1506080_-,NA|307aa|down_9|NZ_LT635479.1_1506234_1507155_-	NA|134aa|up_9|NZ_LT635479.1_1493238_1493640_-	NA	NA|127aa|up_8|NZ_LT635479.1_1493734_1494115_-	NA	NA|52aa|up_7|NZ_LT635479.1_1494161_1494317_-	NA	NA|244aa|up_6|NZ_LT635479.1_1494585_1495317_-	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase	NA|88aa|up_5|NZ_LT635479.1_1495645_1495909_-	NA	NA|159aa|up_4|NZ_LT635479.1_1495931_1496408_-	NA	NA|72aa|up_3|NZ_LT635479.1_1496652_1496868_-	NA	NA|166aa|up_2|NZ_LT635479.1_1496928_1497426_-	NA	NA|149aa|up_1|NZ_LT635479.1_1497796_1498243_-	NA	NA|280aa|up_0|NZ_LT635479.1_1498756_1499596_-	pfam14279, HNH_5, HNH endonuclease	NA|146aa|down_0|NZ_LT635479.1_1500050_1500488_-	cd00719, GIY-YIG_SF, GIY-YIG nuclease domain superfamily	NA|82aa|down_1|NZ_LT635479.1_1500554_1500800_-	smart00290, ZnF_UBP, Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger	NA|475aa|down_2|NZ_LT635479.1_1500996_1502421_+	NA	NA|84aa|down_3|NZ_LT635479.1_1502477_1502729_-	NA	NA|173aa|down_4|NZ_LT635479.1_1502725_1503244_-	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins	NA|82aa|down_5|NZ_LT635479.1_1503233_1503479_-	NA	NA|143aa|down_6|NZ_LT635479.1_1503622_1504051_-	NA	c2c4_V-U1|492aa|down_7|NZ_LT635479.1_1504263_1505739_-	NA	NA|97aa|down_8|NZ_LT635479.1_1505789_1506080_-	NA	NA|307aa|down_9|NZ_LT635479.1_1506234_1507155_-	NA
GCF_900120345.1_PRJEB18024	NZ_LT635479	Lachnoclostridium phocaeense strain Marseille-P3177T chromosome contig00001	3	2368437-2369523	1,3,1	CRT,CRISPRCasFinder,PILER-CR	no	csn2,cas2,cas1,cas9	csa3,RT,cas3,DinG,c2c10_CAS-V-U3,c2c4_V-U1,Cas14u_CAS-V,cas14j,DEDDh,csn2,cas2,cas1,cas9,WYL	Type II-C,Type II-A,Type II-B	GTTTCATTACCCTATAGATTTACACTACTCTCAAAC,GTTTCATTACCCTATAGATTTACACTACTCTCAAAC,GTTTCATTACCCTATAGATTTACACTACTCTCAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	16,15,14	16	TypeII-C,TypeII-A,TypeII-B	csa3,RT,cas3,DinG,c2c10_CAS-V-U3,c2c4_V-U1,Cas14u_CAS-V,cas14j,DEDDh,csn2,cas2,cas1,cas9,WYL	NA|217aa|up_4|NZ_LT635479.1_2363924_2364575_-,NA|123aa|up_1|NZ_LT635479.1_2366823_2367192_-,NA|49aa|up_0|NZ_LT635479.1_2367244_2367391_-,NA|59aa|down_4|NZ_LT635479.1_2376050_2376227_-,NA|43aa|down_5|NZ_LT635479.1_2376249_2376378_-,NA|286aa|down_7|NZ_LT635479.1_2376921_2377779_-,NA|276aa|down_8|NZ_LT635479.1_2377794_2378622_-,NA|104aa|down_9|NZ_LT635479.1_2378713_2379025_-	NA|168aa|up_9|NZ_LT635479.1_2356300_2356804_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|905aa|up_8|NZ_LT635479.1_2356877_2359592_-	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis]	NA|371aa|up_7|NZ_LT635479.1_2359611_2360724_-	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily	NA|535aa|up_6|NZ_LT635479.1_2360913_2362518_-	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	NA|369aa|up_5|NZ_LT635479.1_2362672_2363779_-	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC	NA|217aa|up_4|NZ_LT635479.1_2363924_2364575_-	NA	NA|557aa|up_3|NZ_LT635479.1_2364660_2366331_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|118aa|up_2|NZ_LT635479.1_2366477_2366831_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|123aa|up_1|NZ_LT635479.1_2366823_2367192_-	NA	NA|49aa|up_0|NZ_LT635479.1_2367244_2367391_-	NA	csn2|222aa|down_0|NZ_LT635479.1_2369574_2370240_-	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|NZ_LT635479.1_2370236_2370542_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_2|NZ_LT635479.1_2370553_2371420_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1353aa|down_3|NZ_LT635479.1_2371416_2375475_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|59aa|down_4|NZ_LT635479.1_2376050_2376227_-	NA	NA|43aa|down_5|NZ_LT635479.1_2376249_2376378_-	NA	NA|68aa|down_6|NZ_LT635479.1_2376631_2376835_-	COG1405, SUA7, Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]	NA|286aa|down_7|NZ_LT635479.1_2376921_2377779_-	NA	NA|276aa|down_8|NZ_LT635479.1_2377794_2378622_-	NA	NA|104aa|down_9|NZ_LT635479.1_2378713_2379025_-	NA
