assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900155855.1_BM110	NZ_LT714196	Streptococcus agalactiae isolate BM110 chromosome I	1	963910-964803	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas3,DinG,cas9,cas1,cas2,csn2,csm6,RT,DEDDh,csa3	Type II-C,Type II-A,Type II-B	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	36,36,36	1	1	964276-964305	NZ_LT714196.1_131340-131369	II-A:II-A:II-A	12,13,10	13	TypeII-C,TypeII-A,TypeII-B	cas3,DinG,cas9,cas1,cas2,csn2,csm6,RT,DEDDh,csa3	NA,NA|46aa|down_0|NZ_LT714196.1_965081_965219_+	NA|124aa|up_9|NZ_LT714196.1_953398_953770_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NZ_LT714196.1_953794_954175_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NZ_LT714196.1_954267_955398_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NZ_LT714196.1_955401_956139_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NZ_LT714196.1_956139_956910_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NZ_LT714196.1_956899_957556_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NZ_LT714196.1_957835_961948_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|290aa|up_2|NZ_LT714196.1_961949_962819_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_LT714196.1_962815_963157_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_LT714196.1_963143_963809_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|46aa|down_0|NZ_LT714196.1_965081_965219_+	NA	NA|139aa|down_1|NZ_LT714196.1_965359_965776_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_2|NZ_LT714196.1_965911_967744_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|878aa|down_3|NZ_LT714196.1_967989_970623_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|220aa|down_4|NZ_LT714196.1_970722_971382_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_5|NZ_LT714196.1_971390_971855_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|146aa|down_6|NZ_LT714196.1_971854_972292_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_7|NZ_LT714196.1_972440_975233_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_8|NZ_LT714196.1_975232_976336_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|213aa|down_9|NZ_LT714196.1_976453_977092_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others
GCF_900155855.1_BM110	NZ_LT714196	Streptococcus agalactiae isolate BM110 chromosome I	2	2034541-2034726	2	CRT	no		cas3,DinG,cas9,cas1,cas2,csn2,csm6,RT,DEDDh,csa3	Orphan	TCTGGCTTANCNTCTGGT	18	3	3	2034607-2034624|2034643-2034672|2034691-2034708	NZ_LT714196.1_2034715-2034732|NZ_LT714196.1_2034535-2034564|NZ_LT714196.1_2034535-2034552	NA	4	4	Orphan	cas3,DinG,cas9,cas1,cas2,csn2,csm6,RT,DEDDh,csa3	NA|203aa|up_6|NZ_LT714196.1_2023710_2024319_+,NA	NA|231aa|up_9|NZ_LT714196.1_2015584_2016277_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|1572aa|up_8|NZ_LT714196.1_2016599_2021315_+	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|463aa|up_7|NZ_LT714196.1_2022229_2023618_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|203aa|up_6|NZ_LT714196.1_2023710_2024319_+	NA	NA|834aa|up_5|NZ_LT714196.1_2024408_2026910_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|416aa|up_4|NZ_LT714196.1_2028734_2029982_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|282aa|up_3|NZ_LT714196.1_2030024_2030870_-	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|399aa|up_2|NZ_LT714196.1_2031074_2032271_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|402aa|up_1|NZ_LT714196.1_2032335_2033541_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|180aa|up_0|NZ_LT714196.1_2033587_2034127_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|58aa|down_0|NZ_LT714196.1_2036430_2036604_-	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|51aa|down_1|NZ_LT714196.1_2036639_2036792_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|774aa|down_2|NZ_LT714196.1_2036840_2039162_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|295aa|down_3|NZ_LT714196.1_2039205_2040090_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|547aa|down_4|NZ_LT714196.1_2040114_2041755_-	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|404aa|down_5|NZ_LT714196.1_2041924_2043136_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|224aa|down_6|NZ_LT714196.1_2043202_2043874_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|401aa|down_7|NZ_LT714196.1_2043903_2045106_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|260aa|down_8|NZ_LT714196.1_2045126_2045906_-	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases	NA|246aa|down_9|NZ_LT714196.1_2046064_2046802_+	COG2188, PhnF, Transcriptional regulators [Transcription]
