assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900168365.1_JF4335	NZ_LT799839	Clostridium chauvoei JF4335 chromosome I	1	391813-391888	1	CRISPRCasFinder	no		csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	Orphan	CGTGATTTAATTGCACGTCGTTGG	24	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	NA|398aa|up_8|NZ_LT799839.1_382017_383211_-,NA|343aa|up_7|NZ_LT799839.1_383213_384242_-,NA|96aa|up_6|NZ_LT799839.1_384332_384620_-,NA|255aa|up_3|NZ_LT799839.1_388263_389028_+,NA|168aa|up_2|NZ_LT799839.1_389429_389933_+,NA|102aa|up_1|NZ_LT799839.1_390652_390958_-,NA|129aa|up_0|NZ_LT799839.1_391172_391559_-,NA|128aa|down_4|NZ_LT799839.1_397760_398144_-,NA|159aa|down_7|NZ_LT799839.1_402466_402943_+	NA|231aa|up_9|NZ_LT799839.1_381328_382021_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|398aa|up_8|NZ_LT799839.1_382017_383211_-	NA	NA|343aa|up_7|NZ_LT799839.1_383213_384242_-	NA	NA|96aa|up_6|NZ_LT799839.1_384332_384620_-	NA	NA|480aa|up_5|NZ_LT799839.1_384887_386327_+	pfam13610, DDE_Tnp_IS240, DDE domain	NA|405aa|up_4|NZ_LT799839.1_386650_387865_+	pfam13610, DDE_Tnp_IS240, DDE domain	NA|255aa|up_3|NZ_LT799839.1_388263_389028_+	NA	NA|168aa|up_2|NZ_LT799839.1_389429_389933_+	NA	NA|102aa|up_1|NZ_LT799839.1_390652_390958_-	NA	NA|129aa|up_0|NZ_LT799839.1_391172_391559_-	NA	NA|94aa|down_0|NZ_LT799839.1_391961_392243_+	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	NA|320aa|down_1|NZ_LT799839.1_392527_393487_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|322aa|down_2|NZ_LT799839.1_393506_394472_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|1044aa|down_3|NZ_LT799839.1_394598_397730_+	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism]	NA|128aa|down_4|NZ_LT799839.1_397760_398144_-	NA	NA|482aa|down_5|NZ_LT799839.1_398410_399856_+	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|797aa|down_6|NZ_LT799839.1_399941_402332_+	pfam13287, Fn3_assoc, Fn3 associated	NA|159aa|down_7|NZ_LT799839.1_402466_402943_+	NA	NA|617aa|down_8|NZ_LT799839.1_402949_404800_+	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins	NA|483aa|down_9|NZ_LT799839.1_404951_406400_+	pfam12010, DUF3502, Domain of unknown function (DUF3502)
GCF_900168365.1_JF4335	NZ_LT799839	Clostridium chauvoei JF4335 chromosome I	2	1113676-1115873	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	Type I-B	GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	II-B:II-B:II-B	33,33,33	33	TypeI-B	csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	NA,NA|216aa|down_5|NZ_LT799839.1_1120124_1120772_+	NA|341aa|up_9|NZ_LT799839.1_1102073_1103096_+	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins	NA|407aa|up_8|NZ_LT799839.1_1103203_1104424_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	WYL|67aa|up_7|NZ_LT799839.1_1104688_1104889_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	cas6|231aa|up_6|NZ_LT799839.1_1104933_1105626_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|578aa|up_5|NZ_LT799839.1_1105641_1107375_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|316aa|up_4|NZ_LT799839.1_1107377_1108325_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|260aa|up_3|NZ_LT799839.1_1108327_1109107_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas4|163aa|up_2|NZ_LT799839.1_1111719_1112208_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|up_1|NZ_LT799839.1_1112217_1113216_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|97aa|up_0|NZ_LT799839.1_1113217_1113508_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|409aa|down_0|NZ_LT799839.1_1115993_1117220_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|54aa|down_1|NZ_LT799839.1_1118336_1118498_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|76aa|down_2|NZ_LT799839.1_1118443_1118671_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|80aa|down_3|NZ_LT799839.1_1118872_1119112_+	pfam08737, Rgp1, Rgp1	NA|179aa|down_4|NZ_LT799839.1_1119414_1119951_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|216aa|down_5|NZ_LT799839.1_1120124_1120772_+	NA	NA|584aa|down_6|NZ_LT799839.1_1120836_1122588_+	pfam13320, DUF4091, Domain of unknown function (DUF4091)	NA|292aa|down_7|NZ_LT799839.1_1122801_1123677_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|377aa|down_8|NZ_LT799839.1_1123734_1124865_-	COG5316, COG5316, Uncharacterized conserved protein [Function unknown]	NA|263aa|down_9|NZ_LT799839.1_1125020_1125809_+	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1
GCF_900168365.1_JF4335	NZ_LT799839	Clostridium chauvoei JF4335 chromosome I	3	1117437-1118127	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	Type I-B	GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	II-B:II-B:II-B	10,10,10	10	TypeI-B	csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	NA,NA|216aa|down_4|NZ_LT799839.1_1120124_1120772_+,NA|113aa|down_9|NZ_LT799839.1_1125863_1126202_+	NA|407aa|up_9|NZ_LT799839.1_1103203_1104424_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	WYL|67aa|up_8|NZ_LT799839.1_1104688_1104889_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	cas6|231aa|up_7|NZ_LT799839.1_1104933_1105626_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|578aa|up_6|NZ_LT799839.1_1105641_1107375_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|316aa|up_5|NZ_LT799839.1_1107377_1108325_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|260aa|up_4|NZ_LT799839.1_1108327_1109107_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas4|163aa|up_3|NZ_LT799839.1_1111719_1112208_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|up_2|NZ_LT799839.1_1112217_1113216_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|97aa|up_1|NZ_LT799839.1_1113217_1113508_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|409aa|up_0|NZ_LT799839.1_1115993_1117220_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|54aa|down_0|NZ_LT799839.1_1118336_1118498_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|76aa|down_1|NZ_LT799839.1_1118443_1118671_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|80aa|down_2|NZ_LT799839.1_1118872_1119112_+	pfam08737, Rgp1, Rgp1	NA|179aa|down_3|NZ_LT799839.1_1119414_1119951_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|216aa|down_4|NZ_LT799839.1_1120124_1120772_+	NA	NA|584aa|down_5|NZ_LT799839.1_1120836_1122588_+	pfam13320, DUF4091, Domain of unknown function (DUF4091)	NA|292aa|down_6|NZ_LT799839.1_1122801_1123677_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|377aa|down_7|NZ_LT799839.1_1123734_1124865_-	COG5316, COG5316, Uncharacterized conserved protein [Function unknown]	NA|263aa|down_8|NZ_LT799839.1_1125020_1125809_+	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1	NA|113aa|down_9|NZ_LT799839.1_1125863_1126202_+	NA
GCF_900168365.1_JF4335	NZ_LT799839	Clostridium chauvoei JF4335 chromosome I	4	2416377-2416471	4	CRISPRCasFinder	no		csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	Orphan	TTATCAAATATTCCTTCTGGTAA	23	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD,DinG	NA|114aa|up_5|NZ_LT799839.1_2409103_2409445_+,NA|339aa|down_3|NZ_LT799839.1_2423570_2424587_-	NA|239aa|up_9|NZ_LT799839.1_2404591_2405308_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|150aa|up_8|NZ_LT799839.1_2405291_2405741_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|199aa|up_7|NZ_LT799839.1_2405800_2406397_-	COG3601, COG3601, Predicted membrane protein [Function unknown]	NA|724aa|up_6|NZ_LT799839.1_2406737_2408909_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|114aa|up_5|NZ_LT799839.1_2409103_2409445_+	NA	NA|448aa|up_4|NZ_LT799839.1_2409530_2410874_+	pfam04389, Peptidase_M28, Peptidase family M28	NA|259aa|up_3|NZ_LT799839.1_2410977_2411754_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|330aa|up_2|NZ_LT799839.1_2411787_2412777_-	pfam01032, FecCD, FecCD transport family	NA|292aa|up_1|NZ_LT799839.1_2412795_2413671_-	TIGR03659, heme_ABC_transporter_heme-binding_protein_isdE, heme ABC transporter, heme-binding protein isdE	NA|210aa|up_0|NZ_LT799839.1_2413784_2414414_-	pfam05031, NEAT, Iron Transport-associated domain	NA|366aa|down_0|NZ_LT799839.1_2418150_2419249_-	PRK05589, PRK05589, peptide chain release factor 2; Provisional	NA|840aa|down_1|NZ_LT799839.1_2419307_2421827_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|175aa|down_2|NZ_LT799839.1_2421965_2422490_-	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|339aa|down_3|NZ_LT799839.1_2423570_2424587_-	NA	NA|744aa|down_4|NZ_LT799839.1_2424598_2426830_-	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|379aa|down_5|NZ_LT799839.1_2426962_2428099_+	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	NA|392aa|down_6|NZ_LT799839.1_2428167_2429343_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|201aa|down_7|NZ_LT799839.1_2430503_2431106_+	pfam06866, DUF1256, Protein of unknown function (DUF1256)	NA|345aa|down_8|NZ_LT799839.1_2431163_2432198_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|84aa|down_9|NZ_LT799839.1_2432325_2432577_-	pfam12116, SpoIIID, Stage III sporulation protein D
