The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906479	Serratia ficaria strain NCTC12148 chromosome 1	5209973	1272383	1284505	5209973	integrase,tRNA	Morganella_phage(22.22%)	15	1264322:1264335	1282644:1282657
1264322:1264335	attL	AGCTGCTGGGCGAG	NA	NA	NA	NA
WP_061799444.1|1272383_1273769_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.4	4.3e-44
WP_061799446.1|1273830_1274043_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_095096107.1|1274053_1274920_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	33.7	2.9e-30
WP_167387235.1|1275128_1275338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095096109.1|1275763_1276978_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	58.0	8.0e-135
WP_095096112.1|1277123_1278191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095096117.1|1278335_1278542_+	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	47.2	5.3e-07
WP_095096119.1|1278541_1278964_+	hypothetical protein	NA	A0A1W6JPH9	Morganella_phage	56.0	6.1e-26
WP_095096122.1|1278978_1279830_+	antA/AntB antirepressor family protein	NA	A0A1U9AJ93	Stx1_converting_phage	44.5	6.4e-22
WP_167387236.1|1279816_1280731_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_095096131.1|1280723_1280915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095096134.1|1280914_1281148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095096137.1|1281144_1283268_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	60.0	2.9e-201
1282644:1282657	attR	AGCTGCTGGGCGAG	NA	NA	NA	NA
WP_095096141.1|1283511_1283742_+	hypothetical protein	NA	A0A1P8DTG1	Proteus_phage	56.7	1.2e-15
WP_095096144.1|1284163_1284505_+	DUF3024 domain-containing protein	NA	E7C9Q9	Salmonella_phage	57.5	4.2e-33
>prophage 2
NZ_LT906479	Serratia ficaria strain NCTC12148 chromosome 1	5209973	1874181	1942145	5209973	plate,protease,tRNA	Bacillus_phage(20.0%)	55	NA	NA
WP_061798028.1|1874181_1875582_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	1.7e-80
WP_061798027.1|1875794_1877000_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_095100087.1|1877255_1878956_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	5.4e-20
WP_061798026.1|1879292_1881911_+	aminopeptidase N	NA	NA	NA	NA	NA
WP_061798025.1|1881958_1882732_-	aliphatic sulfonates ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.1	3.5e-27
WP_095096808.1|1882728_1883523_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA	NA
WP_061798022.1|1883534_1884680_-	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA	NA
WP_095096811.1|1884696_1885659_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_061798020.1|1885683_1886262_-	NADPH-dependent FMN reductase	NA	NA	NA	NA	NA
WP_095096814.1|1886520_1887531_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_061798018.1|1887707_1888259_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_095096817.1|1888265_1889369_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_061798015.1|1889436_1891593_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_095096820.1|1891598_1893503_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	28.1	4.4e-47
WP_161990683.1|1893577_1894894_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_095096823.1|1894880_1896527_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_095096826.1|1896523_1897084_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_004928150.1|1897355_1897526_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_095096829.1|1897591_1898866_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_061798007.1|1898862_1899390_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_061798005.1|1899517_1900036_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_061798004.1|1900104_1901877_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_061798003.1|1902065_1902524_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_061798002.1|1902624_1903701_-	porin OmpA	NA	NA	NA	NA	NA
WP_061798001.1|1904059_1904566_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_061797999.1|1904798_1905461_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_095096832.1|1905457_1907593_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_061797997.1|1907619_1908072_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_095096835.1|1908238_1910293_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	26.5	2.2e-15
WP_061798181.1|1910325_1910784_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_061797995.1|1910906_1911572_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_095096838.1|1911825_1912239_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_061797992.1|1912296_1912614_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_061797991.1|1912675_1913866_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	W6LLI2	Streptococcus_phage	26.0	5.4e-27
WP_061797990.1|1913956_1914235_+	acylphosphatase	NA	NA	NA	NA	NA
WP_061797989.1|1914239_1914569_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_061797988.1|1914679_1915339_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	48.8	2.1e-41
WP_095096841.1|1916587_1917085_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_095096844.1|1917117_1918665_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_061797985.1|1918680_1920021_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_061797984.1|1920017_1920707_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_095096847.1|1920703_1922401_+	OmpA family protein	NA	NA	NA	NA	NA
WP_061797982.1|1922416_1922908_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_095096850.1|1923079_1925734_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.1	1.7e-97
WP_095096853.1|1925730_1928226_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.9	1.5e-18
WP_095100093.1|1928632_1929679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095096856.1|1929668_1931645_+	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	32.9	6.0e-63
WP_095096859.1|1931646_1931910_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_095096862.1|1931909_1933343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095096865.1|1933348_1936750_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_095096868.1|1936749_1938342_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_095096871.1|1938369_1940124_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_095096874.1|1940087_1941173_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_095096877.1|1941150_1941696_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_061798202.1|1941695_1942145_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 3
NZ_LT906479	Serratia ficaria strain NCTC12148 chromosome 1	5209973	4841678	4850613	5209973		environmental_Halophage(16.67%)	7	NA	NA
WP_061798918.1|4841678_4843757_+	hypothetical protein	NA	H9YQA8	environmental_Halophage	71.9	5.9e-53
WP_061798920.1|4843797_4845015_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.2	6.5e-28
WP_095099604.1|4845146_4845722_-	aminodeoxychorismate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.6	6.8e-68
WP_095099608.1|4845794_4847321_-	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	43.3	3.5e-79
WP_095099610.1|4847473_4848199_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_095099611.1|4848198_4849884_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	72.5	7.5e-224
WP_061798930.1|4850043_4850613_-	peptidylprolyl isomerase A	NA	A0A1V0S9I2	Catovirus	31.0	7.8e-08
