The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906446	Megamonas hypermegale strain NCTC10570 chromosome 1	2230342	283739	342502	2230342	transposase	Geobacillus_virus(20.0%)	51	NA	NA
WP_095197715.1|283739_284849_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	46.4	1.2e-89
WP_027890653.1|285100_285676_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_027890652.1|285681_286356_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890651.1|286377_287643_+	SLC13/DASS family transporter	NA	Q6A201	Oenococcus_phage	33.0	3.5e-48
WP_027890650.1|287990_288284_+	OadG family protein	NA	NA	NA	NA	NA
WP_027890649.1|288316_289435_+	sodium ion-translocating decarboxylase subunit beta	NA	NA	NA	NA	NA
WP_169449332.1|289475_289643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890648.1|291226_292387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095197672.1|292370_302144_+	YadA-like family protein	NA	NA	NA	NA	NA
WP_027890680.1|302233_302656_+	DUF3887 domain-containing protein	NA	NA	NA	NA	NA
WP_157738438.1|302715_303144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095197674.1|303258_303765_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_157738439.1|303719_304613_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	56.1	2.5e-77
WP_036254880.1|304730_306251_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	29.9	3.7e-20
WP_027890562.1|306380_307346_-	class II fructose-1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_027890561.1|307574_308348_+	ribonuclease HII	NA	A0A0N9QYD4	Chrysochromulina_ericina_virus	40.2	5.8e-22
WP_027890560.1|308359_308719_+	YraN family protein	NA	NA	NA	NA	NA
WP_036254878.1|308718_309303_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_027890558.1|309332_310862_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA	NA
WP_027890557.1|310876_311734_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_036254876.1|311828_313106_+	type II/IV secretion system protein	NA	NA	NA	NA	NA
WP_027890555.1|313083_314100_+	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA	NA
WP_027890554.1|314101_315325_+	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_036254875.1|315341_315746_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_036254874.1|315757_316225_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_027890552.1|316232_316676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890551.1|316672_317053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051177645.1|317039_317597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890549.1|317586_318033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890548.1|318121_318883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095197716.1|319469_320579_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	45.6	6.7e-88
WP_157738440.1|320763_321012_+	PilN domain-containing protein	NA	NA	NA	NA	NA
WP_027890603.1|321013_321547_+	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA	NA
WP_027890604.1|321627_322449_+	TIGR00159 family protein	NA	NA	NA	NA	NA
WP_027890605.1|322445_323417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890606.1|323431_325030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027890607.1|325056_326277_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	26.5	9.8e-32
WP_027890608.1|326338_327592_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_027890609.1|327784_328906_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	38.0	1.3e-43
WP_027890610.1|329284_329725_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_008538697.1|329748_330138_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_036254899.1|330278_331604_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_036254902.1|331717_332878_+	MFS transporter	NA	NA	NA	NA	NA
WP_095197676.1|333031_333973_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	52.7	1.7e-84
WP_027890642.1|334223_335519_+	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
WP_027890643.1|335544_336570_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_027890644.1|336596_337469_+	ribokinase	NA	NA	NA	NA	NA
WP_027890645.1|337672_338692_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_027890646.1|338734_339877_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_027890647.1|340300_341254_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_157738441.1|341608_342502_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	55.3	1.6e-76
>prophage 2
NZ_LT906446	Megamonas hypermegale strain NCTC10570 chromosome 1	2230342	902716	912083	2230342		Prochlorococcus_phage(28.57%)	8	NA	NA
WP_095197685.1|902716_905560_+	DEAD/DEAH box helicase	NA	Q5YA94	Bacillus_phage	29.9	8.1e-29
WP_027890719.1|905641_906913_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_027890720.1|906998_907592_-	hypothetical protein	NA	E3SNU8	Prochlorococcus_phage	55.6	1.5e-49
WP_027890721.1|907616_908228_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.2	9.5e-28
WP_027890722.1|908220_909288_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.7	1.3e-67
WP_027890723.1|909322_910756_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.6	3.4e-68
WP_027890724.1|910816_911530_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	39.7	9.4e-43
WP_027890725.1|911591_912083_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	5.1e-24
>prophage 3
NZ_LT906446	Megamonas hypermegale strain NCTC10570 chromosome 1	2230342	1355298	1368190	2230342		Staphylococcus_phage(20.0%)	13	NA	NA
WP_027889849.1|1355298_1356672_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	40.3	1.1e-92
WP_027889850.1|1357008_1358934_+	N-6 DNA methylase	NA	A0A1W6JNK1	Staphylococcus_phage	30.5	9.6e-34
WP_027889851.1|1358923_1360045_+	restriction endonuclease subunit S	NA	A0A1W6JNN3	Staphylococcus_phage	24.8	7.6e-07
WP_027889852.1|1360158_1361142_+	lactate dehydrogenase	NA	Q89388	Paramecium_bursaria_Chlorella_virus	34.7	2.8e-45
WP_027889853.1|1361210_1361711_+	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	34.6	5.2e-24
WP_027889854.1|1361762_1363034_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	37.1	1.3e-66
WP_027889855.1|1363162_1363636_+	nucleoside deaminase	NA	S4VYZ2	Pandoravirus	37.2	1.0e-16
WP_051177592.1|1363696_1364083_-	thioesterase family protein	NA	NA	NA	NA	NA
WP_027889857.1|1364149_1364860_-	ribonuclease III	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	34.2	9.4e-27
WP_027889858.1|1364870_1366112_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_027889859.1|1366128_1367073_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_027889860.1|1367159_1367390_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	42.3	1.1e-08
WP_027889861.1|1367446_1368190_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	36.6	4.1e-25
>prophage 4
NZ_LT906446	Megamonas hypermegale strain NCTC10570 chromosome 1	2230342	1376906	1384187	2230342		Staphylococcus_phage(50.0%)	9	NA	NA
WP_027889872.1|1376906_1377371_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	70.9	7.7e-46
WP_027889873.1|1377449_1378649_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.1	1.4e-104
WP_027889874.1|1378664_1379321_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	39.9	1.6e-36
WP_027889875.1|1379333_1380428_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.7	2.5e-47
WP_027889876.1|1380733_1381540_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_081654843.1|1381734_1382712_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.0	6.9e-12
WP_071601704.1|1382726_1383128_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_027889878.1|1383174_1383381_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_027889879.1|1383392_1384187_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	32.4	2.7e-22
>prophage 5
NZ_LT906446	Megamonas hypermegale strain NCTC10570 chromosome 1	2230342	1822837	1892819	2230342	protease,transposase	Streptococcus_phage(16.67%)	57	NA	NA
WP_027890472.1|1822837_1823713_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_027890473.1|1823744_1824428_-	TerC family protein	NA	W8EBD0	Pseudomonas_phage	42.1	6.0e-31
WP_027890474.1|1824645_1825611_-	bile acid:sodium symporter family protein	NA	NA	NA	NA	NA
WP_027890475.1|1825847_1826369_-	nitroreductase	NA	NA	NA	NA	NA
WP_036254841.1|1826438_1826618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027890476.1|1826733_1829070_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_027890477.1|1829092_1830724_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_027890478.1|1830711_1831818_-	glutamate synthase	NA	NA	NA	NA	NA
WP_036254843.1|1832229_1832967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027890479.1|1832984_1833374_-	DUF3783 domain-containing protein	NA	NA	NA	NA	NA
WP_027890480.1|1833527_1834580_-	DUF2939 domain-containing protein	NA	NA	NA	NA	NA
WP_027890481.1|1834806_1835208_+	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA	NA
WP_027890482.1|1835244_1836621_-	amino acid permease	NA	NA	NA	NA	NA
WP_027890483.1|1836819_1837455_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	41.1	2.1e-38
WP_027890484.1|1837510_1838599_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	47.2	8.3e-91
WP_027890485.1|1838915_1839410_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	62.0	9.3e-50
WP_027890486.1|1839430_1840003_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_027890487.1|1840029_1841583_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_095197670.1|1841728_1842193_-|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	32.3	1.6e-11
WP_027890678.1|1842376_1843762_-	amino acid permease	NA	NA	NA	NA	NA
WP_027890677.1|1843858_1844980_-	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_027890685.1|1850852_1851956_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_157738446.1|1852309_1853203_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	55.3	9.5e-77
WP_095197703.1|1853157_1853664_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_027890669.1|1853750_1855748_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	47.6	3.4e-151
WP_027890668.1|1856014_1857364_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_095197670.1|1857513_1857978_-|transposase	IS200/IS605 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	32.3	1.6e-11
WP_027889004.1|1858152_1861119_-	type III restriction-modification system endonuclease	NA	Q71TG1	Escherichia_phage	35.1	7.9e-136
WP_027889005.1|1861130_1863002_-	site-specific DNA-methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	46.8	2.3e-112
WP_027889006.1|1863147_1863795_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_027889007.1|1864007_1865018_-	hydrogenase expression/formation protein HypE	NA	NA	NA	NA	NA
WP_027889008.1|1865036_1866137_-	hydrogenase formation protein HypD	NA	NA	NA	NA	NA
WP_027889009.1|1866084_1866351_-	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA	NA
WP_027889010.1|1866369_1868658_-	carbamoyltransferase HypF	NA	NA	NA	NA	NA
WP_027889011.1|1868633_1869110_-	HyaD/HybD family hydrogenase maturation endopeptidase	NA	NA	NA	NA	NA
WP_027889012.1|1869111_1869786_-	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA	NA
WP_027889013.1|1869785_1870127_-	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA	NA
WP_027889014.1|1870177_1870420_-	cation transporter	NA	NA	NA	NA	NA
WP_036254133.1|1870434_1871172_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA	NA
WP_027889016.1|1871164_1873069_-	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA	NA
WP_027889017.1|1873075_1874176_-	hydrogenase small subunit	NA	NA	NA	NA	NA
WP_051177508.1|1874538_1875411_-	YitT family protein	NA	NA	NA	NA	NA
WP_027889019.1|1875605_1876349_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_027889020.1|1876349_1877258_+	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_027889021.1|1877276_1879208_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_027889022.1|1879568_1879910_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_027889023.1|1879928_1882025_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_027889024.1|1882045_1882420_+	desulfoferrodoxin	NA	NA	NA	NA	NA
WP_027889025.1|1882462_1883410_-	D-2-hydroxyacid dehydrogenase	NA	M1I636	Acanthocystis_turfacea_Chlorella_virus	29.5	2.1e-13
WP_027889026.1|1883423_1884710_-	M18 family aminopeptidase	NA	NA	NA	NA	NA
WP_027889027.1|1884835_1885381_-	NADH peroxidase	NA	NA	NA	NA	NA
WP_051177510.1|1885747_1886182_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_027889028.1|1886174_1887329_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_027889029.1|1887459_1888410_+	YybS family protein	NA	NA	NA	NA	NA
WP_027889030.1|1888421_1890434_+	DHH family phosphoesterase	NA	NA	NA	NA	NA
WP_027889031.1|1890405_1890849_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_027889032.1|1890860_1892819_+|protease	ATP-dependent protease, Lon family	protease	A0A0R6PGP8	Moraxella_phage	25.4	1.6e-28
