assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900187095.1_51699_A01	NZ_LT906442	Legionella waltersii strain NCTC13017 chromosome 1	1	98407-98528	1	CRISPRCasFinder	no	WYL	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	Unclear	TGACTAGCATTTGATTCAAACAGCAAAGAAGGAACCGAGCCGCG	44	1	56	98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484|98451-98484	NZ_LT906442.1_1262979-1262946|NZ_LT906442.1_1263133-1263100|NZ_LT906442.1_1263287-1263254|NZ_LT906442.1_1263365-1263332|NZ_LT906442.1_2045993-2046026|NZ_LT906442.1_2682992-2683025|NZ_LT906442.1_2683070-2683103|NZ_LT906442.1_3627446-3627479|NZ_LT906442.1_3627522-3627555|NZ_LT906442.1_502573-502540|NZ_LT906442.1_502651-502618|NZ_LT906442.1_1263055-1263022|NZ_LT906442.1_1263211-1263178|NZ_LT906442.1_1263443-1263410|NZ_LT906442.1_1313439-1313472|NZ_LT906442.1_1313517-1313550|NZ_LT906442.1_1313595-1313628|NZ_LT906442.1_1710319-1710286|NZ_LT906442.1_1710397-1710364|NZ_LT906442.1_2045462-2045495|NZ_LT906442.1_2045540-2045573|NZ_LT906442.1_2045618-2045651|NZ_LT906442.1_2045696-2045729|NZ_LT906442.1_2045774-2045807|NZ_LT906442.1_2045852-2045885|NZ_LT906442.1_2503148-2503181|NZ_LT906442.1_2515949-2515982|NZ_LT906442.1_2516025-2516058|NZ_LT906442.1_2516181-2516214|NZ_LT906442.1_2516257-2516290|NZ_LT906442.1_2683148-2683181|NZ_LT906442.1_2683226-2683259|NZ_LT906442.1_2683381-2683414|NZ_LT906442.1_2906845-2906812|NZ_LT906442.1_3519582-3519615|NZ_LT906442.1_3519816-3519849|NZ_LT906442.1_3627600-3627633|NZ_LT906442.1_502729-502696|NZ_LT906442.1_1313673-1313706|NZ_LT906442.1_1313751-1313784|NZ_LT906442.1_1710475-1710442|NZ_LT906442.1_2045385-2045418|NZ_LT906442.1_2515871-2515904|NZ_LT906442.1_2516103-2516136|NZ_LT906442.1_2605030-2604997|NZ_LT906442.1_2605186-2605153|NZ_LT906442.1_2605264-2605231|NZ_LT906442.1_2605342-2605309|NZ_LT906442.1_2605420-2605387|NZ_LT906442.1_2605498-2605465|NZ_LT906442.1_2605654-2605621|NZ_LT906442.1_2605732-2605699|NZ_LT906442.1_2605810-2605777|NZ_LT906442.1_2605888-2605855|NZ_LT906442.1_2906767-2906734|NZ_LT906442.1_3519738-3519771	NA	1	1	Orphan	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	NA|223aa|up_9|NZ_LT906442.1_90131_90800_+,NA|56aa|up_6|NZ_LT906442.1_92713_92881_-,NA|90aa|up_5|NZ_LT906442.1_93079_93349_+,NA|311aa|up_3|NZ_LT906442.1_94360_95293_-,NA|191aa|down_4|NZ_LT906442.1_104374_104947_+,NA|219aa|down_7|NZ_LT906442.1_106869_107526_-	NA|223aa|up_9|NZ_LT906442.1_90131_90800_+	NA	NA|284aa|up_8|NZ_LT906442.1_90815_91667_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|232aa|up_7|NZ_LT906442.1_91828_92524_-	pfam05118, Asp_Arg_Hydrox, Aspartyl/Asparaginyl beta-hydroxylase	NA|56aa|up_6|NZ_LT906442.1_92713_92881_-	NA	NA|90aa|up_5|NZ_LT906442.1_93079_93349_+	NA	NA|295aa|up_4|NZ_LT906442.1_93497_94382_-	pfam13515, FUSC_2, Fusaric acid resistance protein-like	NA|311aa|up_3|NZ_LT906442.1_94360_95293_-	NA	NA|344aa|up_2|NZ_LT906442.1_95270_96302_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|445aa|up_1|NZ_LT906442.1_96320_97655_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|149aa|up_0|NZ_LT906442.1_97850_98297_+	COG4922, COG4922, Uncharacterized protein conserved in bacteria [Function unknown]	NA|581aa|down_0|NZ_LT906442.1_98703_100446_-	sd00006, TPR, Tetratricopeptide repeat	NA|245aa|down_1|NZ_LT906442.1_100549_101284_-	cd13622, PBP2_Arg_3, Substrate binding domain of an arginine 3rd transport system; the type 2 periplasmic binding fold	NA|420aa|down_2|NZ_LT906442.1_101405_102665_-	pfam12919, TcdA_TcdB, TcdA/TcdB catalytic glycosyltransferase domain	NA|469aa|down_3|NZ_LT906442.1_102767_104174_-	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|191aa|down_4|NZ_LT906442.1_104374_104947_+	NA	NA|251aa|down_5|NZ_LT906442.1_105045_105798_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|304aa|down_6|NZ_LT906442.1_105860_106772_+	pfam00892, EamA, EamA-like transporter family	NA|219aa|down_7|NZ_LT906442.1_106869_107526_-	NA	NA|338aa|down_8|NZ_LT906442.1_107904_108918_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|507aa|down_9|NZ_LT906442.1_109114_110635_-	cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily
GCF_900187095.1_51699_A01	NZ_LT906442	Legionella waltersii strain NCTC13017 chromosome 1	2	959249-959358	2	CRISPRCasFinder	no		WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	Orphan	AACCGAGCCGCGCACGTCAGCAAGCGGACCGA	32	1	1	959281-959326	NZ_LT906442.1_2642926-2642971	NA	1	1	Orphan	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	NA|74aa|up_7|NZ_LT906442.1_945667_945889_-,NA|1988aa|up_2|NZ_LT906442.1_950149_956113_+,NA|655aa|down_5|NZ_LT906442.1_964397_966362_+	NA|306aa|up_9|NZ_LT906442.1_943071_943989_-	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|496aa|up_8|NZ_LT906442.1_944090_945578_-	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism]	NA|74aa|up_7|NZ_LT906442.1_945667_945889_-	NA	NA|228aa|up_6|NZ_LT906442.1_945936_946620_-	PRK00024, PRK00024, DNA repair protein RadC	NA|402aa|up_5|NZ_LT906442.1_946696_947902_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|153aa|up_4|NZ_LT906442.1_947919_948378_+	PRK00601, dut, dUTP diphosphatase	NA|463aa|up_3|NZ_LT906442.1_948379_949768_+	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e	NA|1988aa|up_2|NZ_LT906442.1_950149_956113_+	NA	NA|564aa|up_1|NZ_LT906442.1_956655_958347_-	COG4976, COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only]	NA|195aa|up_0|NZ_LT906442.1_958348_958933_-	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|478aa|down_0|NZ_LT906442.1_959648_961082_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|297aa|down_1|NZ_LT906442.1_961238_962129_+	PRK11453, PRK11453, O-acetylserine/cysteine exporter	NA|281aa|down_2|NZ_LT906442.1_962138_962981_+	cd10807, YdjC_like_3, uncharacterized YdjC-like family proteins from bacteria	NA|131aa|down_3|NZ_LT906442.1_962930_963323_-	pfam04138, GtrA, GtrA-like protein	NA|320aa|down_4|NZ_LT906442.1_963303_964263_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|655aa|down_5|NZ_LT906442.1_964397_966362_+	NA	NA|311aa|down_6|NZ_LT906442.1_966392_967325_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|210aa|down_7|NZ_LT906442.1_967290_967920_-	cd16654, RING-Ubox_CHIP, U-box domain, a modified RING finger, found in carboxyl terminus of HSP70-interacting protein (CHIP) and similar proteins	NA|734aa|down_8|NZ_LT906442.1_968077_970279_-	TIGR00361, Recombination_protein_2, DNA internalization-related competence protein ComEC/Rec2	NA|143aa|down_9|NZ_LT906442.1_970404_970833_-	COG4968, PilE, Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion]
GCF_900187095.1_51699_A01	NZ_LT906442	Legionella waltersii strain NCTC13017 chromosome 1	3	2045871-2045966	3	CRISPRCasFinder	no		WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	Orphan	ACTCACTCCCTGCTGAACTAAGATTTGATTCA	32	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	NA,NA|262aa|down_2|NZ_LT906442.1_2049907_2050693_-,NA|424aa|down_3|NZ_LT906442.1_2050940_2052212_-,NA|203aa|down_4|NZ_LT906442.1_2052224_2052833_-	NA|3521aa|up_9|NZ_LT906442.1_2026147_2036710_+	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|99aa|up_8|NZ_LT906442.1_2036770_2037067_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|485aa|up_7|NZ_LT906442.1_2037069_2038524_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|480aa|up_6|NZ_LT906442.1_2038527_2039967_+	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|97aa|up_5|NZ_LT906442.1_2040613_2040904_-	PRK00430, fis, DNA-binding transcriptional regulator Fis	NA|124aa|up_4|NZ_LT906442.1_2041396_2041768_-	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones]	NA|138aa|up_3|NZ_LT906442.1_2041742_2042156_-	TIGR01999, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, FeS cluster assembly scaffold IscU	NA|389aa|up_2|NZ_LT906442.1_2042152_2043319_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|250aa|up_1|NZ_LT906442.1_2043315_2044065_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|263aa|up_0|NZ_LT906442.1_2044305_2045094_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|315aa|down_0|NZ_LT906442.1_2046240_2047185_-	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad	NA|859aa|down_1|NZ_LT906442.1_2047272_2049849_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|262aa|down_2|NZ_LT906442.1_2049907_2050693_-	NA	NA|424aa|down_3|NZ_LT906442.1_2050940_2052212_-	NA	NA|203aa|down_4|NZ_LT906442.1_2052224_2052833_-	NA	NA|455aa|down_5|NZ_LT906442.1_2053131_2054496_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|1274aa|down_6|NZ_LT906442.1_2054509_2058331_-	TIGR02099, probable_transmembrane_protein, TIGR02099 family protein	NA|158aa|down_7|NZ_LT906442.1_2058308_2058782_-	pfam02050, FliJ, Flagellar FliJ protein	NA|451aa|down_8|NZ_LT906442.1_2058778_2060131_-	TIGR03496, FliI_clade1, flagellar protein export ATPase FliI	NA|217aa|down_9|NZ_LT906442.1_2060123_2060774_-	pfam02108, FliH, Flagellar assembly protein FliH
GCF_900187095.1_51699_A01	NZ_LT906442	Legionella waltersii strain NCTC13017 chromosome 1	4	2465867-2465967	4	CRISPRCasFinder	no	PD-DExK	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	Unclear	GGCTCTTCCCCATTTCCGGGGGCACT	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	NA|444aa|up_9|NZ_LT906442.1_2452434_2453766_+,NA|64aa|up_5|NZ_LT906442.1_2459471_2459663_+,NA|360aa|up_4|NZ_LT906442.1_2460277_2461357_+,NA|130aa|down_0|NZ_LT906442.1_2466316_2466706_+,NA|213aa|down_3|NZ_LT906442.1_2468734_2469373_+,NA|378aa|down_4|NZ_LT906442.1_2469886_2471020_-,NA|364aa|down_5|NZ_LT906442.1_2471099_2472191_-,NA|334aa|down_6|NZ_LT906442.1_2472685_2473687_-,NA|253aa|down_7|NZ_LT906442.1_2474465_2475224_-	NA|444aa|up_9|NZ_LT906442.1_2452434_2453766_+	NA	NA|85aa|up_8|NZ_LT906442.1_2454038_2454293_+	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|99aa|up_7|NZ_LT906442.1_2454282_2454579_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|1370aa|up_6|NZ_LT906442.1_2454843_2458953_-	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|64aa|up_5|NZ_LT906442.1_2459471_2459663_+	NA	NA|360aa|up_4|NZ_LT906442.1_2460277_2461357_+	NA	NA|198aa|up_3|NZ_LT906442.1_2461710_2462304_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|157aa|up_2|NZ_LT906442.1_2462333_2462804_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|408aa|up_1|NZ_LT906442.1_2463374_2464598_+	pfam13427, DUF4111, Domain of unknown function (DUF4111)	PD-DExK|338aa|up_0|NZ_LT906442.1_2464680_2465694_+	pfam06250, DUF1016, Protein of unknown function (DUF1016)	NA|130aa|down_0|NZ_LT906442.1_2466316_2466706_+	NA	NA|200aa|down_1|NZ_LT906442.1_2467006_2467606_-	PRK07578, PRK07578, short chain dehydrogenase; Provisional	NA|61aa|down_2|NZ_LT906442.1_2467744_2467927_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|213aa|down_3|NZ_LT906442.1_2468734_2469373_+	NA	NA|378aa|down_4|NZ_LT906442.1_2469886_2471020_-	NA	NA|364aa|down_5|NZ_LT906442.1_2471099_2472191_-	NA	NA|334aa|down_6|NZ_LT906442.1_2472685_2473687_-	NA	NA|253aa|down_7|NZ_LT906442.1_2474465_2475224_-	NA	NA|142aa|down_8|NZ_LT906442.1_2475331_2475757_+	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|554aa|down_9|NZ_LT906442.1_2475902_2477564_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type
GCF_900187095.1_51699_A01	NZ_LT906442	Legionella waltersii strain NCTC13017 chromosome 1	5	3625315-3625424	5	CRISPRCasFinder	no		WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	Orphan	AACCGAGCCGCGCACGTCAGCAAGCGGACCGA	32	1	1	3625347-3625392	NZ_LT906442.1_3627466-3627511	NA	1	1	Orphan	WYL,csa3,PD-DExK,cas3,DinG,DEDDh,RT,PrimPol	NA,NA|704aa|down_1|NZ_LT906442.1_3627849_3629961_-,NA|181aa|down_6|NZ_LT906442.1_3634905_3635448_-	NA|131aa|up_9|NZ_LT906442.1_3611301_3611694_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|688aa|up_8|NZ_LT906442.1_3611818_3613882_-	pfam18532, DUF5621, Domain of unknown function (DUF5621)	NA|265aa|up_7|NZ_LT906442.1_3613975_3614770_-	PRK01827, thyA, thymidylate synthase; Reviewed	NA|257aa|up_6|NZ_LT906442.1_3614766_3615537_-	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|266aa|up_5|NZ_LT906442.1_3615554_3616352_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|176aa|up_4|NZ_LT906442.1_3618662_3619190_-	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed	NA|337aa|up_3|NZ_LT906442.1_3619741_3620752_+	PRK09461, ansA, cytoplasmic asparaginase I; Provisional	NA|425aa|up_2|NZ_LT906442.1_3620812_3622087_-	pfam09507, CDC27, DNA polymerase subunit Cdc27	NA|460aa|up_1|NZ_LT906442.1_3622209_3623589_+	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]	NA|428aa|up_0|NZ_LT906442.1_3623707_3624991_-	pfam02592, Vut_1, Putative vitamin uptake transporter	NA|355aa|down_0|NZ_LT906442.1_3625842_3626907_+	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily	NA|704aa|down_1|NZ_LT906442.1_3627849_3629961_-	NA	NA|211aa|down_2|NZ_LT906442.1_3630036_3630669_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|200aa|down_3|NZ_LT906442.1_3630665_3631265_-	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional	NA|671aa|down_4|NZ_LT906442.1_3631264_3633277_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|189aa|down_5|NZ_LT906442.1_3633370_3633937_+	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|181aa|down_6|NZ_LT906442.1_3634905_3635448_-	NA	NA|226aa|down_7|NZ_LT906442.1_3635514_3636192_-	pfam06508, QueC, Queuosine biosynthesis protein QueC	NA|480aa|down_8|NZ_LT906442.1_3636280_3637720_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|712aa|down_9|NZ_LT906442.1_3638031_3640167_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]
