assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900187155.1_51726_C01	NZ_LT906456	Actinobacillus suis strain NCTC12996 chromosome 1	1	484309-484381	1	CRISPRCasFinder	no		DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	Orphan	CGCCCCACGTAAAAAACTAAAAG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	NA,NA	NA|219aa|up_9|NZ_LT906456.1_474925_475582_+	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|263aa|up_8|NZ_LT906456.1_475666_476455_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|106aa|up_7|NZ_LT906456.1_476514_476832_-	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA	NA|314aa|up_6|NZ_LT906456.1_476996_477938_+	PRK06860, PRK06860, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|296aa|up_5|NZ_LT906456.1_478101_478989_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|513aa|up_4|NZ_LT906456.1_479085_480624_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|286aa|up_3|NZ_LT906456.1_480763_481621_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|276aa|up_2|NZ_LT906456.1_482230_483058_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|150aa|up_1|NZ_LT906456.1_483054_483504_-	COG3762, COG3762, Predicted membrane protein [Function unknown]	NA|195aa|up_0|NZ_LT906456.1_483570_484155_-	pfam04011, LemA, LemA family	NA|554aa|down_0|NZ_LT906456.1_484934_486596_-	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|316aa|down_1|NZ_LT906456.1_486669_487617_-	PRK09513, fruK, 1-phosphofructokinase; Provisional	NA|635aa|down_2|NZ_LT906456.1_487631_489536_-	PRK13779, PRK13779, bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional	NA|762aa|down_3|NZ_LT906456.1_489794_492080_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|661aa|down_4|NZ_LT906456.1_492083_494066_+	PRK03705, PRK03705, glycogen debranching protein GlgX	NA|437aa|down_5|NZ_LT906456.1_494102_495413_+	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|479aa|down_6|NZ_LT906456.1_495507_496944_+	PRK00654, glgA, glycogen synthase GlgA	NA|834aa|down_7|NZ_LT906456.1_497133_499635_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|139aa|down_8|NZ_LT906456.1_499743_500160_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|686aa|down_9|NZ_LT906456.1_500214_502272_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed
GCF_900187155.1_51726_C01	NZ_LT906456	Actinobacillus suis strain NCTC12996 chromosome 1	2	559593-560618	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	 or Type II-C?,Type II-B,Type II-C, Type II-B,Type II-A	ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC,ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC,ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	36,36,36	1	1	560025-560054	NZ_LT906456.1_823205-823176	NA:NA:NA	15,15,12	15	TypeII-B,orTypeII-C?,TypeII-C,TypeII-B,TypeII-A	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	NA,NA|292aa|down_8|NZ_LT906456.1_569020_569896_+	NA|253aa|up_9|NZ_LT906456.1_547673_548432_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|277aa|up_8|NZ_LT906456.1_548492_549323_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|346aa|up_7|NZ_LT906456.1_549400_550438_-	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|444aa|up_6|NZ_LT906456.1_550683_552015_+	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|154aa|up_5|NZ_LT906456.1_552137_552599_+	PRK00203, rnhA, ribonuclease H; Reviewed	NA|168aa|up_4|NZ_LT906456.1_552755_553259_+	PRK10845, PRK10845, colicin V production protein; Provisional	NA|506aa|up_3|NZ_LT906456.1_553272_554790_+	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	cas9|1055aa|up_2|NZ_LT906456.1_555073_558238_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|306aa|up_1|NZ_LT906456.1_558292_559210_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|109aa|up_0|NZ_LT906456.1_559202_559529_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|152aa|down_0|NZ_LT906456.1_560676_561132_-	pfam17311, DUF5358, Family of unknown function (DUF5358)	NA|447aa|down_1|NZ_LT906456.1_561231_562572_-	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase	NA|116aa|down_2|NZ_LT906456.1_562903_563251_-	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane]	NA|334aa|down_3|NZ_LT906456.1_563321_564323_-	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated	NA|130aa|down_4|NZ_LT906456.1_564414_564804_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|246aa|down_5|NZ_LT906456.1_564831_565569_+	PRK10723, PRK10723, polyphenol oxidase	NA|406aa|down_6|NZ_LT906456.1_565938_567156_+	PRK09692, PRK09692, integrase; Provisional	NA|443aa|down_7|NZ_LT906456.1_567498_568827_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|292aa|down_8|NZ_LT906456.1_569020_569896_+	NA	NA|72aa|down_9|NZ_LT906456.1_570064_570280_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]
GCF_900187155.1_51726_C01	NZ_LT906456	Actinobacillus suis strain NCTC12996 chromosome 1	3	987637-987734	3	CRISPRCasFinder	no		DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	Orphan	CCTAACTTCCAATATGGAAGTCAGGGATAAAAATG	35	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	NA|112aa|up_6|NZ_LT906456.1_978665_979001_+,NA	NA|871aa|up_9|NZ_LT906456.1_972748_975361_-	COG3587, COG3587, Restriction endonuclease [Defense mechanisms]	NA|616aa|up_8|NZ_LT906456.1_975500_977348_-	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|321aa|up_7|NZ_LT906456.1_977557_978520_+	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA|112aa|up_6|NZ_LT906456.1_978665_979001_+	NA	NA|366aa|up_5|NZ_LT906456.1_979065_980163_-	PRK11162, mltA, murein transglycosylase A; Provisional	NA|518aa|up_4|NZ_LT906456.1_980476_982030_+	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|277aa|up_3|NZ_LT906456.1_982431_983262_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|452aa|up_2|NZ_LT906456.1_983265_984621_+	TIGR00665, DnaB, replicative DNA helicase	NA|564aa|up_1|NZ_LT906456.1_984633_986325_+	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|184aa|up_0|NZ_LT906456.1_986321_986873_+	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|253aa|down_0|NZ_LT906456.1_988372_989131_+	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family	NA|156aa|down_1|NZ_LT906456.1_989146_989614_+	pfam11358, DUF3158, Protein of unknown function (DUF3158)	NA|145aa|down_2|NZ_LT906456.1_989916_990351_+	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional	NA|133aa|down_3|NZ_LT906456.1_991966_992365_-	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators	NA|205aa|down_4|NZ_LT906456.1_992435_993050_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|130aa|down_5|NZ_LT906456.1_993931_994321_-	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators	NA|254aa|down_6|NZ_LT906456.1_994728_995490_+	pfam03713, DUF305, Domain of unknown function (DUF305)	NA|692aa|down_7|NZ_LT906456.1_995914_997990_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|59aa|down_8|NZ_LT906456.1_998431_998608_+	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|516aa|down_9|NZ_LT906456.1_998697_1000245_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]
