The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906466	Listeria ivanovii subsp. ivanovii strain NCTC11007 chromosome 1	2919553	117252	120437	2919553	holin	Listeria_phage(50.0%)	6	NA	NA
WP_014091672.1|117252_117705_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	49.3	4.7e-32
WP_014091673.1|117710_118046_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	51.5	3.1e-20
WP_014091674.1|118269_118698_+	hypothetical protein	NA	A8ATZ8	Listeria_phage	45.9	2.3e-12
WP_014091675.1|118709_119129_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	5.5e-19
WP_014091676.1|119305_119728_+|holin	holin family protein	holin	Q2I8E7	Bacillus_phage	45.6	5.6e-27
WP_077905816.1|119759_120437_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	41.5	1.2e-26
>prophage 2
NZ_LT906466	Listeria ivanovii subsp. ivanovii strain NCTC11007 chromosome 1	2919553	1260295	1315832	2919553	tRNA,protease	Bacillus_virus(17.65%)	55	NA	NA
WP_014092665.1|1260295_1261435_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014092666.1|1261516_1261912_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	55.9	3.0e-14
WP_014092667.1|1262062_1262278_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025279905.1|1262431_1262965_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_014092669.1|1262979_1263648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014092670.1|1264070_1265009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014092671.1|1265124_1266408_+	trigger factor	NA	NA	NA	NA	NA
WP_003719537.1|1266594_1267854_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.0e-145
WP_014092672.1|1267971_1268538_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_014092673.1|1268572_1269142_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_014092674.1|1269244_1269787_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_025279906.1|1269796_1270660_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_014092675.1|1270656_1271442_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	42.3	3.8e-29
WP_014092676.1|1271575_1272436_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_014092677.1|1272705_1274784_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.2	6.0e-106
WP_014092678.1|1274848_1276153_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_014092679.1|1276438_1277341_+	tyrosine recombinase XerC	NA	A0A2H4PCY2	Mycobacterium_phage	28.1	2.0e-13
WP_014092680.1|1277361_1277901_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_014092681.1|1277914_1279324_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	28.2	4.9e-43
WP_014092682.1|1279344_1280124_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_014092683.1|1280222_1280642_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_014092684.1|1280663_1280984_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014092685.1|1280976_1281849_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_025279907.1|1281891_1282488_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_025279908.1|1282645_1283053_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_014092686.1|1283232_1285200_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.2	9.6e-122
WP_014092687.1|1285196_1287656_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.3	1.5e-100
WP_014092688.1|1287737_1288205_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_014092689.1|1288334_1290194_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	31.9	2.2e-43
WP_014092690.1|1290403_1291111_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	38.7	3.2e-11
WP_025279910.1|1291332_1293009_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_014092692.1|1293134_1294052_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1294166_1294400_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_095075141.1|1294506_1295751_+	GTPase HflX	NA	NA	NA	NA	NA
WP_014092693.1|1295722_1296949_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1297150_1297519_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014092694.1|1297589_1298924_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.8	3.5e-06
WP_025279912.1|1299117_1300413_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	1.7e-146
WP_014092696.1|1300451_1300973_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014092697.1|1301002_1301617_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_014092698.1|1301771_1302101_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_014092699.1|1302198_1302426_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_014092700.1|1302572_1304567_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1304788_1305028_+	YneF family protein	NA	NA	NA	NA	NA
WP_014092701.1|1305086_1305890_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_014092702.1|1306656_1307163_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	63.0	2.1e-52
WP_025279913.1|1307172_1308477_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	50.7	6.4e-130
WP_014092704.1|1308466_1309666_-	DEAD/DEAH box helicase	NA	L0P6E9	Lactobacillus_phage	46.1	1.1e-88
WP_014092705.1|1309649_1310024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1310325_1311054_+	UMP kinase	NA	NA	NA	NA	NA
WP_014092706.1|1311053_1311611_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_014092707.1|1311838_1312597_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.6	1.1e-22
WP_014092708.1|1312610_1313399_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_014092709.1|1313413_1314556_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_025279914.1|1314569_1315832_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 3
NZ_LT906466	Listeria ivanovii subsp. ivanovii strain NCTC11007 chromosome 1	2919553	1838473	1846784	2919553		Synechococcus_phage(33.33%)	8	NA	NA
WP_014093121.1|1838473_1839067_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.6	5.4e-28
WP_025279996.1|1839063_1840113_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.7	1.7e-64
WP_014093123.1|1840128_1841556_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.2	3.1e-53
WP_014093124.1|1841540_1843760_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.1	1.2e-157
WP_014093125.1|1843752_1844436_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_014093126.1|1844439_1844685_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014093127.1|1844696_1845410_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	38.3	2.0e-40
WP_014093128.1|1845491_1846784_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	5.5e-17
>prophage 4
NZ_LT906466	Listeria ivanovii subsp. ivanovii strain NCTC11007 chromosome 1	2919553	2004388	2012377	2919553		Faustovirus(14.29%)	10	NA	NA
WP_014093266.1|2004388_2005474_-	histidinol-phosphate transaminase	NA	A0A1X7BZP2	Faustovirus	25.7	5.5e-18
WP_014093267.1|2005473_2005848_-	chorismate mutase	NA	NA	NA	NA	NA
WP_014093268.1|2005844_2006942_-	3-dehydroquinate synthase	NA	E5ERI4	Ostreococcus_lucimarinus_virus	29.3	4.4e-23
WP_014093269.1|2006944_2008111_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	39.2	5.4e-48
WP_014093270.1|2008316_2008760_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	45.8	6.9e-28
WP_014093271.1|2008779_2009745_-	heptaprenyl diphosphate synthase component II	NA	A0A1V0SE37	Indivirus	20.9	1.1e-06
WP_014093272.1|2009755_2010469_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_014093273.1|2010491_2011259_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_014093274.1|2011317_2011887_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	47.2	1.2e-40
WP_003720260.1|2012101_2012377_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	69.7	2.0e-25
>prophage 5
NZ_LT906466	Listeria ivanovii subsp. ivanovii strain NCTC11007 chromosome 1	2919553	2514257	2522116	2919553		Streptococcus_phage(50.0%)	7	NA	NA
WP_025280087.1|2514257_2515229_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	1.2e-51
WP_014093687.1|2515236_2516205_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	42.7	9.7e-67
WP_014093688.1|2516206_2517082_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.8	4.1e-08
WP_014093689.1|2517190_2518921_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	52.6	2.0e-171
WP_014093690.1|2518966_2520037_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014093691.1|2520055_2521039_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.2	2.0e-51
WP_014093692.1|2521156_2522116_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	54.1	7.5e-88
>prophage 6
NZ_LT906466	Listeria ivanovii subsp. ivanovii strain NCTC11007 chromosome 1	2919553	2835765	2845980	2919553		Tupanvirus(33.33%)	7	NA	NA
WP_014093960.1|2835765_2837919_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	33.8	2.8e-42
WP_014093961.1|2837965_2839741_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	36.9	1.2e-78
WP_014093962.1|2840062_2841529_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	6.7e-96
WP_014093963.1|2841811_2842342_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	47.3	6.3e-28
WP_025280141.1|2842399_2844013_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.4	1.7e-47
WP_095075148.1|2844191_2844509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014093964.1|2844525_2845980_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	29.8	1.6e-49
