The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT906436	Listeria monocytogenes strain NCTC10357 chromosome 1	2864663	117145	123670	2864663	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|117145_117598_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|117603_117939_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|118155_118584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732220.1|118595_119012_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
WP_014600375.1|119289_119679_+	DUF5072 family protein	NA	NA	NA	NA	NA
WP_003721744.1|119691_120204_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|120251_120554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009911444.1|120595_121000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014600377.1|120986_122855_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003721748.1|122851_123670_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	4.2e-39
>prophage 2
NZ_LT906436	Listeria monocytogenes strain NCTC10357 chromosome 1	2864663	1105076	1112499	2864663		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1105076_1105460_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_014600722.1|1105481_1106465_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	35.3	3.1e-12
WP_014930875.1|1106479_1107493_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	6.0e-11
WP_003721509.1|1107701_1109192_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_003727000.1|1109203_1110028_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_014600724.1|1110040_1110349_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003732712.1|1110409_1110814_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_014600725.1|1110942_1112499_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
>prophage 3
NZ_LT906436	Listeria monocytogenes strain NCTC10357 chromosome 1	2864663	1243761	1303202	2864663	protease,tRNA	Bacillus_virus(16.67%)	58	NA	NA
WP_014600789.1|1243761_1244901_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1244981_1245377_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1245527_1245743_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010989719.1|1245861_1246395_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1246412_1247078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014600790.1|1247339_1248278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1248392_1249676_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1249860_1251120_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_009924620.1|1251238_1251805_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_009924619.1|1251839_1252409_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1252510_1253053_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1253062_1253926_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003723891.1|1253922_1254708_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723892.1|1254841_1255702_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_014600791.1|1255973_1258052_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	4.1e-107
WP_009924616.1|1258114_1259419_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_009911635.1|1259701_1260604_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1260624_1261164_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_010989722.1|1261177_1262587_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.7	4.9e-43
WP_003726695.1|1262607_1263387_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003724129.1|1263489_1263909_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1263930_1264242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009932949.1|1264244_1265117_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_014600792.1|1265158_1265755_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1265912_1266320_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1266500_1268468_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_010989723.1|1268464_1270924_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	4.7e-102
WP_009913867.1|1271006_1271474_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_014600793.1|1271800_1273534_+	LapB repeat-containing protein	NA	NA	NA	NA	NA
WP_012951575.1|1273865_1275662_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_012951576.1|1275695_1277564_-	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_003723737.1|1277776_1278475_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	1.3e-12
WP_031695695.1|1278707_1280384_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_014600794.1|1280509_1281427_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1281549_1281783_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_022741839.1|1281893_1283117_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010989728.1|1283109_1284336_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1284539_1284908_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1284978_1286313_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_014600796.1|1286456_1287752_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	61.6	2.4e-145
WP_003723437.1|1287795_1288317_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1288347_1288962_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003723439.1|1289119_1289449_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723440.1|1289540_1289768_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003732809.1|1289914_1291909_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1292129_1292369_+	YneF family protein	NA	NA	NA	NA	NA
WP_014600797.1|1292419_1293262_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_014600798.1|1293280_1294012_-	methyltransferase domain-containing protein	NA	A0A1X9I6N4	Streptococcus_phage	58.7	4.4e-80
WP_003723445.1|1294033_1294540_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	4.0e-56
WP_003723446.1|1294549_1295854_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	9.5e-134
WP_010989732.1|1295843_1297049_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	47.1	4.9e-92
WP_003723448.1|1297026_1297401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1297693_1298422_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1298421_1298979_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_014600799.1|1299208_1299967_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_014600800.1|1299980_1300769_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_014600801.1|1300783_1301926_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003723454.1|1301939_1303202_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 4
NZ_LT906436	Listeria monocytogenes strain NCTC10357 chromosome 1	2864663	1793870	1802156	2864663		Prochlorococcus_phage(33.33%)	8	NA	NA
WP_014600928.1|1793870_1794437_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	39.1	1.3e-26
WP_014600929.1|1794433_1795483_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	8.3e-64
WP_003722245.1|1795501_1796929_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_014600930.1|1796913_1799133_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.2	1.0e-159
WP_003733240.1|1799125_1799809_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1799812_1800058_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003733239.1|1800069_1800783_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.7	2.7e-42
WP_014600931.1|1800863_1802156_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	5.5e-17
>prophage 5
NZ_LT906436	Listeria monocytogenes strain NCTC10357 chromosome 1	2864663	2462187	2470031	2864663		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2462187_2463159_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2463166_2464135_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_010990001.1|2464136_2465012_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	3.2e-08
WP_014601136.1|2465119_2466850_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	4.3e-174
WP_003734087.1|2466891_2467953_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014601137.1|2467969_2468953_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	37.2	1.6e-48
WP_003722610.1|2469071_2470031_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 6
NZ_LT906436	Listeria monocytogenes strain NCTC10357 chromosome 1	2864663	2757490	2767522	2864663		Tupanvirus(33.33%)	6	NA	NA
WP_014601215.1|2757490_2759644_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.1	6.7e-44
WP_014601216.1|2759667_2761440_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.1	1.1e-79
WP_003722118.1|2761600_2763067_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
WP_003722119.1|2763352_2763883_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	49.3	2.6e-29
WP_014931037.1|2763940_2765551_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.9	7.5e-48
WP_003725314.1|2766067_2767522_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
