The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	555473	646727	4618754	head,tail,tRNA,integrase,terminase,capsid,portal,lysis,transposase,protease,plate	Salmonella_phage(71.74%)	83	585351:585365	647527:647541
WP_000208240.1|555473_556004_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_000068796.1|556095_557091_-	cell division protein FtsN	NA	NA	NA	NA	NA
WP_000841337.1|557184_558210_-	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA	NA
WP_000109394.1|558364_560563_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_000715284.1|560766_560979_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_000792797.1|561024_561687_-	TIGR02117 family protein	NA	NA	NA	NA	NA
WP_000852811.1|564132_564450_-	met regulon transcriptional regulator MetJ	NA	NA	NA	NA	NA
WP_000197208.1|564714_565875_+	cystathionine gamma-synthase	NA	NA	NA	NA	NA
WP_000110811.1|565877_568310_+	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA	NA
WP_001134817.1|569036_570161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000865256.1|570296_571853_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000609328.1|572117_573356_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.4	5.9e-101
WP_000976816.1|573352_574459_+	alanine racemase	NA	NA	NA	NA	NA
WP_001090459.1|574403_575885_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_000007507.1|576163_577054_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
WP_000108110.1|577218_579399_+	catalase/peroxidase HPI	NA	NA	NA	NA	NA
WP_000374033.1|579505_580609_-	glycerol dehydrogenase	NA	NA	NA	NA	NA
WP_000424865.1|580620_581283_-	fructose-6-phosphate aldolase	NA	M4SLG0	Cyanophage	34.1	1.2e-28
WP_000274601.1|581537_582374_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001192092.1|582534_584268_-	phosphoethanolamine transferase CptA	NA	NA	NA	NA	NA
WP_001005544.1|584469_587121_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
585351:585365	attL	GCGCGCCGCCACGGC	NA	NA	NA	NA
WP_000800208.1|587489_588641_-	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_000935332.1|588729_589734_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_001575262.1|589741_590518_+	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_001230038.1|590635_592012_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_001025919.1|592295_593213_+	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA	NA
WP_001120789.1|593195_594596_-	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA	NA
WP_000971958.1|594794_595430_+	HTH-type transcriptional repressor FabR	NA	NA	NA	NA	NA
WP_000813838.1|595445_595805_+	YijD family membrane protein	NA	NA	NA	NA	NA
WP_000186987.1|595851_596952_-|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	NA	NA	NA	NA
WP_000591414.1|597325_599170_+	TonB-dependent vitamin B12 receptor BtuB	NA	A0A0P0I887	Acinetobacter_phage	30.0	2.2e-11
WP_000201804.1|599114_599966_+	glutamate racemase	NA	NA	NA	NA	NA
WP_001541181.1|605945_606794_-	HTH-type transcriptional regulator HdfR	NA	NA	NA	NA	NA
WP_000840996.1|606900_607239_+	macrodomain Ori organization protein MaoP	NA	NA	NA	NA	NA
WP_000502114.1|607346_607805_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
WP_000972391.1|609386_609605_-	ogr/Delta-like zinc finger family protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
WP_001011760.1|609695_610796_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
WP_000980381.1|610792_611278_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
WP_001282796.1|611274_614352_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
WP_000763311.1|614344_614464_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.8e-13
WP_001280897.1|614478_614781_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
WP_001207656.1|614835_615351_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
WP_000046142.1|615360_616533_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
WP_000905046.1|616675_617242_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	86.3	1.1e-86
WP_001174915.1|617670_618111_+|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	68.0	3.1e-52
WP_000805568.1|618082_618676_-|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	64.3	9.2e-60
WP_000104804.1|618675_620190_-|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	73.2	6.8e-200
WP_001086816.1|620186_620792_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
WP_000268271.1|620784_621693_-|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	89.7	1.3e-142
WP_000177595.1|621679_622039_-	GPW/gp25 family protein	NA	A0A1S6KZZ4	Salmonella_phage	84.9	6.1e-51
WP_000993754.1|622035_622614_-|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	86.5	5.5e-94
WP_000829146.1|622682_623129_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	85.6	6.6e-63
WP_001039939.1|623121_623553_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	95.1	1.5e-72
WP_001080928.1|623648_624077_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	77.3	2.2e-47
WP_000727853.1|624073_624451_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
WP_001069905.1|624452_624965_-	lysozyme	NA	E5G6N1	Salmonella_phage	92.3	3.1e-88
WP_000171568.1|624945_625161_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
WP_000868175.1|625164_625368_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
WP_000673504.1|625367_625832_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	1.4e-76
WP_000059191.1|625927_626578_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
WP_000742518.1|626581_627640_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.4e-180
WP_000216244.1|627656_628490_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.6	1.5e-121
WP_001098422.1|628632_630399_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
WP_000518064.1|630398_631436_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	89.5	1.3e-173
WP_000185757.1|631470_632211_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_001146827.1|632207_633122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001251692.1|633735_634614_+	hypothetical protein	NA	A0A2H4J8D6	uncultured_Caudovirales_phage	49.4	6.1e-52
WP_000822803.1|634722_635022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000343717.1|635068_636277_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.2	3.7e-47
WP_001580533.1|636412_636601_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	95.2	7.9e-26
WP_000017503.1|636754_639169_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
WP_000104152.1|639165_640023_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.2	3.5e-161
WP_000752613.1|640019_640247_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
WP_001244218.1|640246_640480_-	DUF2732 domain-containing protein	NA	E5G6L6	Salmonella_phage	94.8	2.0e-31
WP_000996717.1|640547_640889_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	98.2	1.7e-55
WP_000956176.1|641006_641303_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	90.4	4.9e-22
WP_000460893.1|641310_641820_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
WP_001247706.1|641852_642074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001047327.1|642199_642769_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
WP_000900883.1|642784_642976_+	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	65.9	6.8e-09
WP_000290950.1|643164_644217_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
WP_001311244.1|644842_644941_+	ilv operon leader peptide	NA	NA	NA	NA	NA
WP_001012560.1|645080_646727_+	acetolactate synthase 2 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	9.0e-65
647527:647541	attR	GCGCGCCGCCACGGC	NA	NA	NA	NA
>prophage 2
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	1068363	1081024	4618754	integrase	Enterobacteria_phage(55.56%)	13	1058898:1058911	1072029:1072042
1058898:1058911	attL	GTTAATGTTAAAAC	NA	NA	NA	NA
WP_000152561.1|1068363_1069854_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	36.1	4.0e-11
WP_000772672.1|1070324_1071590_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	41.0	1.6e-74
WP_000573583.1|1071652_1072729_-	serine/threonine protein kinase	NA	A0A2H4UU60	Bodo_saltans_virus	28.2	7.8e-17
1072029:1072042	attR	GTTTTAACATTAAC	NA	NA	NA	NA
WP_000700163.1|1072725_1073784_-	serine/threonine protein kinase	NA	G9BWE0	Planktothrix_phage	44.7	4.9e-56
WP_000493739.1|1073773_1074937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000214423.1|1075212_1075779_-	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	64.9	1.8e-60
WP_000468230.1|1075794_1076034_-	ogr/Delta-like zinc finger family protein	NA	Q7M294	Enterobacteria_phage	60.5	3.7e-20
WP_001779443.1|1076037_1076781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000556588.1|1077320_1077587_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	70.5	5.8e-30
WP_015701354.1|1077583_1078135_+	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.1e-30
WP_001216603.1|1078131_1078359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000795388.1|1078355_1078676_+	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_000783716.1|1078690_1081024_+	toprim domain-containing protein	NA	Q7M2A8	Enterobacteria_phage	86.5	0.0e+00
>prophage 3
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	1735685	1741716	4618754		Salmonella_virus(50.0%)	6	NA	NA
WP_106417237.1|1735685_1735832_+	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	73.9	1.1e-14
WP_106417236.1|1735847_1735991_+	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	87.8	9.0e-14
WP_000400611.1|1736980_1738903_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	77.2	5.6e-300
WP_000703599.1|1738919_1739174_-	glycosyltransferase	NA	A8CG95	Salmonella_phage	79.5	3.1e-25
WP_001682026.1|1739142_1739532_-	GtrA family protein	NA	A0A192Y6N5	Salmonella_phage	91.5	6.9e-56
WP_000377769.1|1740774_1741716_-	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	88.2	2.4e-147
>prophage 4
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	2061233	2071740	4618754		Enterobacteria_phage(37.5%)	10	NA	NA
WP_001111852.1|2061233_2062637_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	1.1e-21
WP_000981469.1|2062814_2063708_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_000697846.1|2064084_2065170_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
WP_001023656.1|2065169_2066069_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
WP_000857536.1|2066116_2066995_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.8	2.3e-107
WP_000973711.1|2066995_2067547_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	7.7e-53
WP_000018220.1|2067552_2068527_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000648783.1|2068542_2069316_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000565909.1|2069320_2070400_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	1.3e-16
WP_000126347.1|2070426_2071740_+	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
>prophage 5
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	2155482	2162716	4618754		Morganella_phage(33.33%)	8	NA	NA
WP_000394197.1|2155482_2155902_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
WP_000457648.1|2155904_2157173_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	91.2	3.3e-224
WP_000208507.1|2157618_2157831_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	1.5e-20
WP_024131163.1|2157841_2158030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001080666.1|2158290_2159475_-	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.4	1.4e-107
WP_000107435.1|2160125_2160437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000377043.1|2160516_2161212_+	phosphohydrolase	NA	S4W232	Pandoravirus	27.5	2.1e-07
WP_001157299.1|2161285_2162716_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
>prophage 6
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	2582399	2595517	4618754	transposase,tail,integrase	Burkholderia_virus(23.08%)	20	2583928:2583987	2594275:2595589
WP_001165548.1|2582399_2582972_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	84.7	8.8e-84
WP_001802272.1|2583043_2583547_+|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	54.0	2.3e-43
2583928:2583987	attL	GAGCCTGTTCAGGATTCTGTGTAAATACCTTTTCTCAGAAGTGGCCGTCCAGGCGGTCAC	NA	NA	NA	NA
WP_000343717.1|2583961_2585170_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.2	3.7e-47
WP_065304567.1|2585434_2586427_-	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	37.3	3.0e-55
WP_144079282.1|2586470_2586854_+	hypothetical protein	NA	A4JWN3	Burkholderia_virus	58.9	1.7e-27
WP_000567456.1|2586863_2587028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000990529.1|2587031_2588801_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	Q6QIE0	Burkholderia_phage	68.5	2.8e-229
WP_000960673.1|2588811_2589978_+	AAA family ATPase	NA	A4JWN1	Burkholderia_virus	59.7	3.3e-122
WP_000843446.1|2589980_2590250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001140134.1|2590277_2590808_+	host-nuclease inhibitor Gam family protein	NA	L7P7T1	Pseudomonas_phage	66.1	3.4e-58
WP_000632575.1|2591096_2591369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000197790.1|2591378_2591681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001315283.1|2591677_2592061_+	hypothetical protein	NA	K7PJQ4	Enterobacteria_phage	58.9	2.3e-27
WP_153781233.1|2592068_2592269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000131941.1|2592265_2592949_+	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	37.3	2.6e-34
WP_000631816.1|2592945_2593176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010989166.1|2593165_2593381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001315282.1|2593373_2593823_+	regulatory protein GemA	NA	A4JWM5	Burkholderia_virus	46.6	9.4e-25
WP_001281695.1|2593794_2594184_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	54.2	4.5e-31
WP_000343717.1|2594308_2595517_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.2	3.7e-47
2594275:2595589	attR	GAGCCTGTTCAGGATTCTGTGTAAATACCTTTTCTCAGAAGTGGCCGTCCAGGCGGTCACCGAACTCGATAATAAAGCGGCTCATTGCCATACGCCAGTCCCGCAGTGGCATCGTCCATTTCTGTGAAGCCGCCTGGATTGCCAGCCACACCACTTTTTTCACCGAGTCGTCTGTCGGGAACACTTTACGCTTTTTGATCGCATGGCGGATCACGCTGTTTAGCGACTCGATGGCATTCGTCGTATAGATCACTTTGCGGATGTCCGTTGGATAAGCGAAGAACGTGGCAAGATTCGGCCAGTTAGCCTGCCAGCTTCGGCTTATCTGAGGATAGCGACAGTCCCAGGCCGCAGCGAACGCTTCCAGTGCCTGCTGGCCTGCCTCTTCCGTGGGAGCCTGATAAATCGCTTTCAGGTCGCGAGTGACGGCTTTGTAGTCCTTCCATGACACGAAGCGCAGGCTGTTGCGCACCATATGCACGATGCATAACTGGATGCGGGCCTTCGGATATACTGTGTTGATGGCATCCGGGAAGCCTTTCAGGCCATCCACACAGGCGATGAGGATATCGTTCAGACCGCGGTTTTTCAGTTCAGTCAGCACATTGAGCCAGAACTTCGCCCCTTCATTTTCGGCCAGCCACATACCCAGCAGTTCTTTCTGACCTTCGATATTGATGCCCAGTGCCAGGAACACCGATTTGTTGATGACGCGACTGTCCTGCCGAACTTTCAGGACGATACAGTCAAGATAAACAATGGGGTAAACAGCATCCAGTGGTCGGTTTTGCCATTCTACAACCTGCTCCATCACGGCATCGGTAACCTTTGATATCAGTGCCGGTGAAACATCTGCGTCATACAGTTCTTTGAACGCAGCAGCTATCTCACGGGTGGTCATCCCTTTGGCATACAACGAGAGGATCTGGTTATCCATCCCGGTAATACGGGTCTGATTTTTCTTTACCAGTTGTGGTTCGAAGGTACCGTCACGATCGCGCGGAGTACGCAGTTCCAGTGGACCGTCGCCTGTGATAACGGTCTTTGTGGAAAAACCGTTGCGGGAGTTAGCTCCTGGTCTGGACTGATTTTTCTCATACCCAAGATGGTGTGTCATCTCTGCATTGAGAGCGGCTTCAACGCTGAGCTTTTTCAGCAGCCGATCAAACTGACTGAGGTCTTCAGGGGTTTTGAGGTTTTTGGCCAGTTCGTTAGCCAGAGCCTGTAACTGTTTTTCGTCCATAAATTAACCTTCATTTGATGCTGGATTGAACATATCAAAATCAGGCAATTACACAAATCTATGTACAGGCTC	NA	NA	NA	NA
>prophage 7
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	3049952	3130247	4618754	head,holin,tail,terminase,transposase,protease,plate	Salmonella_phage(68.85%)	93	NA	NA
WP_000343717.1|3049952_3051161_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.2	3.7e-47
WP_000502118.1|3051611_3052070_-|transposase	IS200/IS605-like element IS200F family transposase	transposase	NA	NA	NA	NA
WP_000374046.1|3052733_3053393_+|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
WP_000904446.1|3053479_3053809_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000072884.1|3053805_3054087_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000502118.1|3054823_3055282_-|transposase	IS200/IS605-like element IS200F family transposase	transposase	NA	NA	NA	NA
WP_000140485.1|3056413_3057625_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000561983.1|3057682_3058000_+	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_001537782.1|3058044_3058458_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_000847719.1|3058631_3059294_+	DUF2057 family protein	NA	NA	NA	NA	NA
WP_000424187.1|3059388_3059847_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000420526.1|3059882_3061937_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
WP_001261222.1|3062060_3062507_+	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000950867.1|3062525_3064679_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001202371.1|3064665_3065271_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000288732.1|3065487_3065997_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_010989142.1|3066351_3067404_+	porin OmpA	NA	NA	NA	NA	NA
WP_000877174.1|3067475_3067928_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_000156455.1|3068113_3069874_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000227928.1|3069942_3070461_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_001764860.1|3070560_3070728_-	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000759136.1|3070981_3071545_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_000433416.1|3071541_3073182_-	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000333152.1|3073186_3074440_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000053045.1|3074454_3076362_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_001086472.1|3076374_3078483_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	W6LLI2	Streptococcus_phage	29.6	5.1e-20
WP_000224084.1|3078581_3079691_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001220671.1|3079687_3080230_-	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000291724.1|3080395_3081406_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_000193884.1|3081613_3084226_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	1.1e-19
WP_000480169.1|3085242_3085944_+	DUF1076 domain-containing protein	NA	NA	NA	NA	NA
WP_000421106.1|3086865_3087384_-|tail	tail fiber assembly protein	tail	A0A1B0VCD0	Salmonella_phage	62.8	1.7e-46
WP_001681975.1|3087398_3088910_-	hypothetical protein	NA	S4TP62	Salmonella_phage	59.4	1.5e-111
WP_000049938.1|3088909_3089590_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	98.7	6.9e-128
WP_001197092.1|3089586_3090786_-|plate	baseplate J/gp47 family protein	plate	A0A0M4RD32	Salmonella_phage	97.5	8.5e-214
WP_001270647.1|3090786_3091140_-	hypothetical protein	NA	A0A0M4R339	Salmonella_phage	98.3	3.2e-60
WP_001685627.1|3091380_3092136_-	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	85.3	4.1e-105
WP_001144794.1|3092194_3092623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000050472.1|3092622_3093354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000826019.1|3093548_3093884_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	52.2	1.1e-20
WP_000042301.1|3093880_3094912_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	51.4	1.2e-96
WP_000388505.1|3094914_3095217_-	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	57.0	2.0e-26
WP_000346974.1|3095220_3095871_-	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	60.6	3.0e-56
WP_000990867.1|3095870_3097823_-	hypothetical protein	NA	A0A0M4REK7	Salmonella_phage	56.0	1.8e-181
WP_000389047.1|3098000_3098453_-	hypothetical protein	NA	A0A0M4S6U8	Salmonella_phage	76.6	1.9e-57
WP_000257259.1|3098456_3098897_-	DUF3277 family protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.7	3.5e-56
WP_001135544.1|3098908_3100054_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.5	2.2e-163
WP_000389379.1|3100057_3100621_-	hypothetical protein	NA	A0A0M4R331	Salmonella_phage	75.3	8.9e-81
WP_001142488.1|3100595_3100985_-	hypothetical protein	NA	A0A0M3ULK0	Salmonella_phage	98.4	6.0e-68
WP_000008737.1|3100971_3101526_-	hypothetical protein	NA	A0A0M4S631	Salmonella_phage	100.0	4.8e-95
WP_001125675.1|3101522_3101930_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	97.8	7.1e-72
WP_001040702.1|3101895_3102264_-	hypothetical protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
WP_000627464.1|3102305_3103247_-	DUF2184 domain-containing protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
WP_000128060.1|3103258_3103756_-	hypothetical protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
WP_057484671.1|3103760_3104993_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	98.8	5.3e-227
WP_138010671.1|3105007_3105745_-|head	phage head morphogenesis protein	head	A0A0M4REK0	Salmonella_phage	88.1	7.8e-101
WP_000113511.1|3105629_3107099_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	99.2	1.7e-280
WP_000204794.1|3107098_3108502_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	70.1	6.5e-189
WP_001118118.1|3108467_3109220_-	hypothetical protein	NA	A0A0M3ULJ9	Salmonella_phage	56.5	3.4e-11
WP_001070544.1|3109309_3109537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000495544.1|3109633_3110011_-	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	68.5	4.9e-43
WP_001050879.1|3110053_3110593_-	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	38.4	2.5e-08
WP_001075998.1|3110589_3111204_-	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	93.1	3.2e-108
WP_000226307.1|3111203_3111485_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
WP_001294876.1|3111471_3111861_-|holin	phage holin family protein	holin	K7PHB9	Enterobacterial_phage	70.2	3.1e-40
WP_000798706.1|3112077_3112527_+	lipoprotein	NA	NA	NA	NA	NA
WP_001534733.1|3112662_3112788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000343717.1|3112989_3114198_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.2	3.7e-47
WP_001047634.1|3114509_3115307_-	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	3.4e-150
WP_001617856.1|3115296_3115443_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
WP_001096560.1|3115439_3116051_-	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.5	2.5e-92
WP_000929790.1|3116259_3116862_-	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
WP_001217670.1|3117196_3117436_-	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
WP_000963896.1|3117620_3118118_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_000509711.1|3118128_3118308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208074.1|3119153_3119726_-	DUF550 domain-containing protein	NA	S4TSR6	Salmonella_phage	68.0	1.3e-66
WP_000445792.1|3119729_3120203_-	class I SAM-dependent methyltransferase	NA	H9C170	Pectobacterium_phage	80.1	1.6e-67
WP_000065105.1|3120202_3120727_-	ead/Ea22-like family protein	NA	A0A220NQV2	Salmonella_phage	99.4	1.8e-91
WP_000113623.1|3120723_3121071_-	DUF977 family protein	NA	H6WRX9	Salmonella_phage	90.4	4.8e-53
WP_000800010.1|3121081_3121831_-	ATP-binding protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
WP_001681803.1|3121833_3122817_-	replication protein	NA	H6WRX7	Salmonella_phage	99.7	2.1e-162
WP_001574095.1|3122901_3123276_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
WP_000869365.1|3123241_3123478_-	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	98.7	1.1e-37
WP_001009036.1|3123607_3124012_+	transcriptional regulator	NA	H6WRX4	Salmonella_phage	99.3	7.1e-72
WP_000186242.1|3124300_3124501_+	cell division protein FtsZ	NA	G8C7T2	Escherichia_phage	48.4	2.4e-12
WP_000995349.1|3124591_3124888_+	host-nuclease inhibitor protein Gam	NA	A0A0M5M5Z9	Salmonella_phage	96.9	4.4e-47
WP_001764962.1|3124893_3125679_+	phage recombination protein Bet	NA	A0A0M4RD39	Salmonella_phage	99.6	9.7e-150
WP_000187053.1|3125675_3126356_+	YqaJ viral recombinase family protein	NA	A0A0M3ULE0	Salmonella_phage	98.7	1.9e-130
WP_000034527.1|3126433_3127498_+	DGQHR domain-containing protein	NA	T1SBJ4	Salmonella_phage	74.6	6.3e-152
WP_010989138.1|3127494_3128376_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A0M4R347	Salmonella_phage	93.0	1.2e-153
WP_001754984.1|3128381_3128621_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	96.2	9.7e-37
WP_000065276.1|3128661_3128910_+	excisionase family protein	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
WP_001262313.1|3128954_3130247_+	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	99.8	5.0e-252
>prophage 8
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	3201746	3209058	4618754	protease,integrase	Ralstonia_phage(16.67%)	7	3196241:3196255	3207794:3207808
3196241:3196255	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
WP_001539594.1|3201746_3202124_+|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
WP_001117984.1|3202285_3202483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000934058.1|3202694_3204971_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.8e-164
WP_000520789.1|3205001_3205322_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000447499.1|3205645_3205867_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000125880.1|3205996_3207943_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
3207794:3207808	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
WP_001201759.1|3207939_3209058_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
>prophage 9
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	3822930	3910091	4618754	tail,tRNA,plate	Salmonella_phage(40.0%)	67	NA	NA
WP_000118732.1|3822930_3824274_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_001007105.1|3824277_3824814_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_000312802.1|3824880_3825366_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_001171575.1|3825602_3826028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001147174.1|3825999_3826401_-	BPSL0067 family protein	NA	NA	NA	NA	NA
WP_000996818.1|3827985_3828528_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_000175184.1|3828591_3828882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000449770.1|3828967_3831631_-	type VI secretion system ATPase TssH	NA	A0A2I7SAX5	Vibrio_phage	34.8	9.8e-77
WP_000806676.1|3831998_3832901_+	type VI secretion system-associated protein TagK	NA	NA	NA	NA	NA
WP_000750542.1|3832887_3833712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000108006.1|3833708_3834203_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_000371495.1|3834218_3836102_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000145233.1|3836098_3837094_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_001670675.1|3838688_3839420_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.9	6.4e-39
WP_000917872.1|3839483_3839951_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.9	4.7e-51
WP_000801233.1|3839947_3840670_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_001052766.1|3840704_3841460_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000644706.1|3841531_3842899_+	murein transglycosylase D	NA	A0A0A7NU10	Lactobacillus_phage	33.0	1.4e-10
WP_000207227.1|3842954_3843725_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_001230964.1|3843802_3844603_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_001127546.1|3844734_3845910_-	MFS transporter	NA	NA	NA	NA	NA
WP_000648539.1|3846014_3846929_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000154870.1|3846949_3847753_-	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	35.4	2.7e-38
WP_001235094.1|3853784_3856358_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.6	9.0e-128
WP_000992642.1|3856487_3857219_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|3857215_3858196_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197667.1|3858327_3859065_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|3859336_3859675_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|3859778_3859826_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200079.1|3859925_3861086_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210976.1|3861046_3861955_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225191.1|3862012_3863134_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|3863143_3864214_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212373.1|3864653_3865172_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030993.1|3865164_3866385_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	37.0	1.7e-07
WP_000065257.1|3866541_3866889_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469802.1|3866929_3867697_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|3867741_3868290_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|3868308_3868557_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|3868900_3870262_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|3870427_3871219_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|3871238_3872525_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001682111.1|3872645_3873203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|3873284_3873875_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059155.1|3873998_3874877_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880973.1|3874962_3876624_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|3876772_3877111_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|3877276_3877567_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|3877556_3878033_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|3878182_3878665_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237656.1|3879284_3890159_+	Ig-like domain repeat protein	NA	NA	NA	NA	NA
WP_000533850.1|3890222_3891632_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196138.1|3891628_3893809_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_010989217.1|3893816_3894980_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000151542.1|3895522_3896296_-	reverse transcriptase	NA	NA	NA	NA	NA
WP_000380485.1|3896264_3896438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000972389.1|3896699_3896918_-	ogr/Delta-like zinc finger family protein	NA	Q53ZE7	Salmonella_virus	71.9	1.9e-18
WP_001011760.1|3897008_3898109_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
WP_000980381.1|3898105_3898591_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
WP_001282796.1|3898587_3901665_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
WP_000763311.1|3901657_3901777_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.8e-13
WP_001280897.1|3901791_3902094_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
WP_001207656.1|3902148_3902664_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
WP_000046142.1|3902673_3903846_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
WP_000905046.1|3903988_3904555_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	86.3	1.1e-86
WP_001221113.1|3905238_3906354_+	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA	NA
WP_001111827.1|3906434_3910091_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
>prophage 10
NZ_LT905143	Salmonella enterica subsp. enterica serovar Typhi isolate E98_3139-sc-1927833 chromosome 1	4618754	4230032	4272836	4618754	transposase,protease,integrase,tRNA	Bacillus_virus(20.0%)	46	4220148:4220161	4280468:4280481
4220148:4220161	attL	TTCACAACGCCAGC	NA	NA	NA	NA
WP_001204111.1|4230032_4230491_-|transposase	IS200/IS605-like element IS200F family transposase	transposase	NA	NA	NA	NA
WP_000034386.1|4230680_4231760_-	class II fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_000111274.1|4231861_4233025_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000218338.1|4233046_4234093_-	erythrose-4-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000218564.1|4234466_4234892_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_000124001.1|4234917_4235496_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_000553254.1|4235496_4236204_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001775599.1|4236191_4236869_+	energy-coupling factor ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_000956919.1|4236862_4237519_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	28.6	1.6e-09
WP_000502119.1|4237623_4238082_-|transposase	IS200/IS605-like element IS200F family transposase	transposase	NA	NA	NA	NA
WP_000098658.1|4238270_4240262_-	transketolase	NA	NA	NA	NA	NA
WP_000701830.1|4240537_4241296_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_000105550.1|4241396_4242317_-	agmatinase	NA	NA	NA	NA	NA
WP_001278580.1|4242544_4244521_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
WP_000729109.1|4244529_4244661_-	acid stress response protein YqgB	NA	NA	NA	NA	NA
WP_077905074.1|4244794_4244959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001803086.1|4244955_4245255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062140.1|4245310_4246465_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
WP_001113171.1|4246957_4248352_+	galactose/proton symporter	NA	NA	NA	NA	NA
WP_000856775.1|4248430_4248928_+|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_000286121.1|4249023_4249731_+	deoxyribonuclease I	NA	NA	NA	NA	NA
WP_001800534.1|4249807_4250539_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_000593242.1|4250558_4251506_+	glutathione synthase	NA	NA	NA	NA	NA
WP_001053167.1|4251721_4252285_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_001285491.1|4252284_4252701_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000098333.1|4252747_4253434_-	global regulatory protein	NA	NA	NA	NA	NA
WP_001055657.1|4253563_4254544_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_000997790.1|4254561_4255266_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_001094848.1|4255284_4255851_+	YggT family protein	NA	NA	NA	NA	NA
WP_001277205.1|4255847_4256138_+	YggU family protein	NA	NA	NA	NA	NA
WP_001174773.1|4256145_4256739_+	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_001096530.1|4256731_4257868_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
WP_000252198.1|4257958_4258966_-	DUF1202 domain-containing protein	NA	NA	NA	NA	NA
WP_000394189.1|4259098_4260145_-	L-asparaginase 2	NA	NA	NA	NA	NA
WP_000502119.1|4260463_4260922_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	NA	NA	NA	NA
WP_000343717.1|4260981_4262190_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.2	3.7e-47
WP_000984827.1|4262367_4263087_-	DUF2884 domain-containing protein	NA	NA	NA	NA	NA
WP_001107559.1|4263136_4263463_-	YggL family protein	NA	NA	NA	NA	NA
WP_000786887.1|4263462_4264182_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_001148958.1|4264336_4265389_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_000091706.1|4265416_4265692_+	oxidative damage protection protein	NA	NA	NA	NA	NA
WP_000976287.1|4265804_4266890_+	membrane-bound lytic murein transglycosylase MltC	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
WP_001049802.1|4267106_4268363_+	nucleoside permease	NA	NA	NA	NA	NA
WP_000234466.1|4270973_4271681_+	DUF554 domain-containing protein	NA	NA	NA	NA	NA
WP_001681938.1|4272022_4272307_+	DUF4102 domain-containing protein	NA	A0A0P0IRB7	Acinetobacter_phage	35.2	3.2e-10
WP_014341481.1|4272491_4272836_+|integrase	integrase	integrase	NA	NA	NA	NA
4280468:4280481	attR	TTCACAACGCCAGC	NA	NA	NA	NA
