The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT960788	Lactobacillus sakei strain MFPB16A1401 chromosome 1	1994583	622003	664775	1994583	bacteriocin,protease,integrase	Lactobacillus_phage(36.84%)	57	644301:644318	657699:657716
WP_025015927.1|622003_622351_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_094365682.1|622605_622860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157697942.1|623270_624440_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_011374269.1|624441_625188_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_025015924.1|625592_625928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016264785.1|626026_626209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094365892.1|626350_626683_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_082267673.1|626701_626989_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_025015921.1|627012_627192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025015920.1|627220_627457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011374279.1|627529_627853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011374280.1|627936_628221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011374281.1|628390_629431_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA	NA
WP_099960197.1|629575_629890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960198.1|629914_630208_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_099960199.1|630194_630632_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011374284.1|630788_632141_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_056936388.1|632299_632542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960200.1|632663_632804_+	DUF3781 domain-containing protein	NA	NA	NA	NA	NA
WP_099960201.1|632816_633053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025015914.1|633092_633818_-	DUF554 domain-containing protein	NA	NA	NA	NA	NA
WP_099960202.1|634922_636398_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_099960203.1|636419_637010_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_099960204.1|636987_637413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960205.1|637448_639230_-	glycerophosphoryl diester phosphodiesterase membrane domain-containing protein	NA	I6XE30	Staphylococcus_phage	26.2	1.2e-09
WP_099960206.1|639320_640727_-	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_061827194.1|640886_641561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960207.1|641736_642894_-|integrase	site-specific integrase	integrase	J7KBT5	Streptococcus_phage	39.4	5.6e-61
WP_061827192.1|642954_643977_-	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	50.0	3.3e-81
WP_076835057.1|644033_644840_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
644301:644318	attL	TCTTTCAATACACTTATC	NA	NA	NA	NA
WP_076790340.1|644995_645184_+	helix-turn-helix domain-containing protein	NA	E9LUT5	Lactobacillus_phage	48.0	7.0e-06
WP_004271094.1|645186_645459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076647183.1|645798_646065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076790334.1|646229_647021_+	bifunctional DNA primase/polymerase	NA	A0A1X9I739	Streptococcus_phage	37.8	1.7e-40
WP_099960210.1|647011_648508_+	DNA primase	NA	A0A1P8VVM0	Streptococcus_phage	35.1	1.9e-69
WP_076647194.1|648787_649180_+	hypothetical protein	NA	A0A2H4JHE6	uncultured_Caudovirales_phage	42.7	1.5e-13
WP_099960211.1|649323_649629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960426.1|649654_649774_+	DUF2292 domain-containing protein	NA	NA	NA	NA	NA
WP_061827182.1|649875_650298_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_061827181.1|650365_650707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080563426.1|651031_651142_+	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_076647206.1|651222_652917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061827174.1|653069_653294_+	transcriptional regulator	NA	A0A1S5SDR1	Streptococcus_phage	37.1	6.8e-08
WP_099960212.1|654379_655492_-|integrase	site-specific integrase	integrase	B4XYR4	Lactobacillus_phage	37.3	9.7e-63
WP_099960213.1|655686_656652_-	hypothetical protein	NA	E3W8I2	Leuconostoc_phage	63.5	1.2e-27
WP_099960214.1|656753_657209_-	toxin	NA	A0A2H4JE34	uncultured_Caudovirales_phage	34.7	6.9e-15
WP_099960215.1|657227_657569_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	49.0	3.1e-20
WP_099960216.1|657727_657955_+	helix-turn-helix domain-containing protein	NA	A0A2H4PQQ0	Staphylococcus_phage	47.7	2.8e-09
657699:657716	attR	GATAAGTGTATTGAAAGA	NA	NA	NA	NA
WP_099960217.1|657968_658280_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_157771196.1|658276_658435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960218.1|658513_658714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960219.1|658797_659283_+	siphovirus Gp157 family protein	NA	Q8W5W1	Listeria_phage	34.0	1.6e-14
WP_099960220.1|659287_660028_+	AAA family ATPase	NA	Q6J1V8	Lactobacillus_phage	58.7	6.7e-68
WP_099960221.1|659960_661316_+	DEAD/DEAH box helicase	NA	Q9T0Y3	Lactobacillus_phage	59.7	4.7e-152
WP_099960222.1|661318_661870_+	DUF669 domain-containing protein	NA	Q9T0Y2	Lactobacillus_phage	59.4	2.4e-54
WP_099960223.1|661888_664183_+	DNA primase	NA	Q9T0Y1	Lactobacillus_phage	60.4	4.1e-281
WP_099960224.1|664460_664775_+	VRR-NUC domain-containing protein	NA	A0A1B0YA93	Lactobacillus_phage	59.2	2.9e-28
>prophage 2
NZ_LT960788	Lactobacillus sakei strain MFPB16A1401 chromosome 1	1994583	668004	688682	1994583	capsid,terminase,tail,portal,holin	Lactobacillus_phage(50.0%)	27	NA	NA
WP_099960231.1|668004_668373_+	hypothetical protein	NA	B4XYT8	Lactobacillus_phage	37.3	8.3e-11
WP_099960427.1|668378_668687_+	hypothetical protein	NA	A0A2K9V545	Lactobacillus_phage	59.0	6.1e-23
WP_099960232.1|668686_669007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960233.1|669161_669575_+	transcriptional regulator	NA	A0A2I7SC40	Paenibacillus_phage	27.6	5.3e-06
WP_157771197.1|669859_670006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960234.1|670038_670533_+|terminase	terminase small subunit	terminase	O03926	Lactobacillus_phage	61.0	4.8e-46
WP_099960235.1|670510_671830_+|terminase	PBSX family phage terminase large subunit	terminase	U3PBE8	Lactobacillus_phage	57.5	9.5e-150
WP_157771198.1|671889_673362_+|portal	phage portal protein	portal	Q938L2	Temperate_phage	48.2	7.9e-121
WP_172952843.1|673358_674486_+|capsid	capsid protein	capsid	U3PFU0	Lactobacillus_phage	39.3	1.0e-67
WP_157771199.1|674577_675195_+	phage scaffolding protein	NA	O03931	Lactobacillus_phage	38.3	5.1e-13
WP_099960239.1|675199_676024_+|capsid	N4-gp56 family major capsid protein	capsid	Q9AZ61	Lactococcus_phage	69.8	4.2e-95
WP_172952844.1|676118_676496_+	hypothetical protein	NA	C5IUJ7	Streptococcus_phage	35.2	6.5e-11
WP_099960241.1|676488_676833_+	hypothetical protein	NA	O03932	Lactobacillus_phage	33.3	6.1e-08
WP_099960428.1|676841_677168_+|capsid	capsid protein	capsid	Q5YA66	Bacillus_phage	48.6	1.3e-23
WP_099960242.1|677167_677560_+|capsid	capsid protein	capsid	Q5YA65	Bacillus_phage	46.2	3.5e-31
WP_035145511.1|677570_678023_+	hypothetical protein	NA	A0A1S5SEC5	Streptococcus_phage	51.7	2.0e-30
WP_099960243.1|678162_678627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960244.1|678637_679246_+	hypothetical protein	NA	Q938K4	Temperate_phage	35.9	1.1e-23
WP_099960245.1|679238_682259_+	tape measure protein	NA	L0P6G7	Lactobacillus_phage	61.5	2.6e-78
WP_099960246.1|682242_682968_+|tail	phage tail family protein	tail	A0A1B2APY0	Phage_Wrath	43.2	3.5e-53
WP_099960247.1|682967_684500_+	hypothetical protein	NA	A0A1B2APX2	Phage_Wrath	40.2	7.3e-85
WP_099960248.1|684499_685996_+	metallophosphoesterase	NA	O03968	Lactobacillus_phage	35.2	1.1e-48
WP_099960249.1|685995_686799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960250.1|686798_687104_+	DUF2977 domain-containing protein	NA	Q7M292	Lactobacillus_phage	42.2	5.6e-13
WP_099960252.1|687313_687589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099960253.1|687585_687795_+|holin	holin	holin	A0A2H4IZQ3	uncultured_Caudovirales_phage	45.9	2.3e-05
WP_099960254.1|687791_688682_+	N-acetylmuramoyl-L-alanine amidase	NA	Q9MCC8	Lactobacillus_phage	47.5	1.2e-44
>prophage 3
NZ_LT960788	Lactobacillus sakei strain MFPB16A1401 chromosome 1	1994583	745258	753552	1994583		Synechococcus_phage(33.33%)	8	NA	NA
WP_085391676.1|745258_746554_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	29.6	8.0e-16
WP_085391677.1|746666_747392_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FUQ7	Synechococcus_phage	39.9	9.2e-38
WP_085391678.1|747384_747645_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_085391679.1|747641_748328_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_099960266.1|748317_750543_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.0	1.2e-149
WP_085391681.1|750518_751952_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.9	3.8e-51
WP_099960267.1|751957_752986_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.6	5.6e-65
WP_099960268.1|752982_753552_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.4	5.4e-25
>prophage 4
NZ_LT960788	Lactobacillus sakei strain MFPB16A1401 chromosome 1	1994583	1098105	1105168	1994583	tRNA	Bacillus_virus(16.67%)	7	NA	NA
WP_016265160.1|1098105_1098606_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	38.7	3.5e-28
WP_016265161.1|1098616_1099567_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	64.3	1.6e-122
WP_035145823.1|1099713_1101603_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.1	2.3e-48
WP_011374705.1|1101715_1102177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025015765.1|1102245_1103439_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	50.5	1.9e-43
WP_025015764.1|1103586_1104459_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	41.5	4.8e-57
WP_025015763.1|1104559_1105168_-	lytic polysaccharide monooxygenase	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	30.0	1.0e-13
>prophage 5
NZ_LT960788	Lactobacillus sakei strain MFPB16A1401 chromosome 1	1994583	1256714	1267352	1994583		Enterococcus_phage(33.33%)	12	NA	NA
WP_056948015.1|1256714_1257410_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A096XT26	Enterococcus_phage	40.3	5.0e-17
WP_016265281.1|1258127_1258379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016265282.1|1258605_1258980_-	hypothetical protein	NA	E3W8I0	Leuconostoc_phage	41.9	4.1e-05
WP_025016522.1|1258972_1260277_-	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	39.7	6.2e-85
WP_051524308.1|1260276_1260522_-	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	39.7	7.0e-06
WP_035144976.1|1260541_1260916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096695396.1|1260942_1261629_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A096XT26	Enterococcus_phage	40.9	2.2e-17
WP_016265285.1|1261871_1263914_-	KUP/HAK/KT family potassium transporter	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	35.7	3.0e-70
WP_011374865.1|1264071_1264245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011374866.1|1264377_1264857_+	nucleoside 2-deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	35.4	1.5e-15
WP_016265286.1|1264908_1266282_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.4	3.9e-45
WP_016265287.1|1266632_1267352_-	aquaporin family protein	NA	M1HQB9	Paramecium_bursaria_Chlorella_virus	30.2	2.4e-22
>prophage 6
NZ_LT960788	Lactobacillus sakei strain MFPB16A1401 chromosome 1	1994583	1352423	1360569	1994583		Bacillus_phage(33.33%)	9	NA	NA
WP_016265355.1|1352423_1354169_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	27.7	1.5e-46
WP_011374970.1|1354310_1354541_-	YneF family protein	NA	NA	NA	NA	NA
WP_025016405.1|1354621_1354864_-	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_011374972.1|1354998_1355613_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	58.2	1.1e-15
WP_011374973.1|1355783_1356302_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	41.3	3.4e-26
WP_025016402.1|1356325_1358638_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.9	3.8e-77
WP_035146095.1|1358782_1359775_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.0	2.9e-50
WP_011374976.1|1359860_1360226_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_011374977.1|1360242_1360569_+	heavy metal-binding domain-containing protein	NA	M4STD1	Rhodobacter_phage	34.6	5.4e-06
>prophage 1
NZ_LT960789	Lactobacillus sakei strain MFPB16A1401 plasmid 2, complete sequence	47094	13764	23080	47094	transposase	Enterococcus_phage(33.33%)	8	NA	NA
WP_029508458.1|13764_15912_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.3	9.4e-256
WP_025016513.1|16018_16945_+	ribonucleotide-diphosphate reductase subunit beta	NA	A0A2H4P8A9	Corynebacterium_phage	31.7	1.7e-36
WP_099960441.1|16959_17910_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	55.0	5.5e-99
WP_025016529.1|18248_19424_+|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	29.2	8.2e-28
WP_025016530.1|19535_19985_+	DUF305 domain-containing protein	NA	A0A1V0SJW0	Klosneuvirus	33.1	2.0e-06
WP_025016531.1|20042_20603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003587210.1|21063_21531_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_011373852.1|22159_23080_+|transposase	IS30-like element ISLsa1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	38.2	9.2e-51
