The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT985474	Listeria monocytogenes isolate JF5203_1 chromosome 1	2900890	1263671	1320528	2900890	tRNA,protease	Bacillus_virus(16.67%)	56	NA	NA
WP_003734523.1|1263671_1264811_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1264890_1265286_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1265436_1265652_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003727523.1|1265775_1266309_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_010958879.1|1266324_1266990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003727521.1|1267251_1268190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1268304_1269588_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1269772_1271032_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003726393.1|1271150_1271717_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003726394.1|1271751_1272321_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003727520.1|1272422_1272965_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726396.1|1272974_1273838_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727519.1|1273834_1274620_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_003727518.1|1274753_1275614_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727517.1|1275886_1277965_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003727516.1|1278027_1279332_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003731303.1|1279614_1280517_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003724001.1|1280537_1281077_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003727514.1|1281090_1282500_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
WP_003726695.1|1282520_1283300_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003727513.1|1283402_1283822_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1283844_1284156_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003726697.1|1284158_1285031_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_096866010.1|1285072_1285669_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003727511.1|1285826_1286234_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003727510.1|1286414_1288382_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_010958880.1|1288378_1290838_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.8	1.1e-101
WP_003726814.1|1290920_1291388_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_010958881.1|1292014_1293841_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003727507.1|1293873_1295760_-	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
WP_003726657.1|1295972_1296671_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_010958882.1|1296903_1298580_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726658.1|1298706_1299624_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1299745_1299979_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_015084731.1|1300089_1301313_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003727505.1|1301305_1302532_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1302733_1303102_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1303172_1304507_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_010958885.1|1304650_1305946_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	1.1e-147
WP_003734519.1|1305979_1306504_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1306534_1307149_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003734518.1|1307305_1307635_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003734517.1|1307728_1307956_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003734516.1|1308102_1310097_+	transketolase	NA	NA	NA	NA	NA
WP_003726667.1|1310317_1310557_+	YneF family protein	NA	NA	NA	NA	NA
WP_003726668.1|1310605_1311337_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726669.1|1311358_1311865_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_003726670.1|1311874_1313179_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	51.9	4.7e-133
WP_012681273.1|1313168_1314374_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	7.0e-91
WP_003727498.1|1314351_1314726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1315018_1315747_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1315746_1316304_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003727497.1|1316534_1317293_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003727496.1|1317306_1318095_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003726414.1|1318109_1319252_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010958886.1|1319265_1320528_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 2
NZ_LT985474	Listeria monocytogenes isolate JF5203_1 chromosome 1	2900890	1813462	1821748	2900890		Synechococcus_phage(33.33%)	8	NA	NA
WP_003726209.1|1813462_1814029_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
WP_003726210.1|1814025_1815075_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
WP_003722245.1|1815093_1816521_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_009918191.1|1816505_1818725_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
WP_003726212.1|1818717_1819401_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1819404_1819650_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003726214.1|1819661_1820375_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
WP_003726215.1|1820455_1821748_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 3
NZ_LT985474	Listeria monocytogenes isolate JF5203_1 chromosome 1	2900890	2497002	2504847	2900890		Streptococcus_phage(50.0%)	7	NA	NA
WP_003725407.1|2497002_2497974_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003725408.1|2497981_2498950_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	3.9e-68
WP_003722606.1|2498951_2499827_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003734494.1|2499934_2501665_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	5.6e-174
WP_003741152.1|2501706_2502768_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725411.1|2502784_2503768_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003722610.1|2503887_2504847_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
