The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	248523	256996	2858690		Synechococcus_phage(33.33%)	9	NA	NA
WP_000238668.1|248523_249090_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	2.7e-29
WP_000030815.1|249092_250121_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.1	2.9e-61
WP_000483707.1|250113_251598_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	8.5e-46
WP_000032750.1|251576_253766_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	1.3e-140
WP_000666799.1|253758_254430_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848351.1|254431_254695_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174055.1|254694_255399_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.1e-47
WP_001010409.1|255402_256527_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_001807816.1|256513_256996_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 2
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	276779	301247	2858690	holin,protease,bacteriocin	Planktothrix_phage(50.0%)	27	NA	NA
WP_001088778.1|276779_277961_+|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
WP_000284455.1|277998_278328_+	staphostatin B	NA	NA	NA	NA	NA
WP_000184947.1|278565_279387_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000150215.1|279379_280183_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000526673.1|280169_281843_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000190616.1|281829_283191_-	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000070966.1|283372_284311_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000620945.1|284361_284913_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000867362.1|285077_285293_+	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_001794249.1|285356_285488_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081332.1|285536_286496_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|286986_287343_+	DoxX family protein	NA	NA	NA	NA	NA
WP_157958947.1|287431_287620_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_001796515.1|287709_288000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571192.1|288087_288729_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	1.0e-19
WP_000668623.1|288725_289046_-	YxeA family protein	NA	NA	NA	NA	NA
WP_000870811.1|289048_291013_-|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000790905.1|291056_291341_-|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_099119695.1|291975_292053_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_001033867.1|292352_292955_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000214898.1|292969_293146_-	YkvS family protein	NA	NA	NA	NA	NA
WP_000668814.1|293344_294331_+	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000876826.1|294411_294630_-	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000287260.1|294839_295409_+	competence protein ComK	NA	NA	NA	NA	NA
WP_000414168.1|295897_297409_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000021872.1|297547_298906_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_014937014.1|298922_301247_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
>prophage 3
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	355717	378942	2858690	integrase	Streptococcus_phage(94.74%)	23	351426:351443	390469:390486
351426:351443	attL	GCGGGGCCCCAACACAGA	NA	NA	NA	NA
WP_000420682.1|355717_356032_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|356047_356434_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|356462_357848_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|357850_358003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398286.1|358025_359231_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	99.8	1.1e-232
WP_001009056.1|359273_359495_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|359611_360109_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|360083_360590_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331163.1|360573_363021_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	99.9	0.0e+00
WP_000804748.1|363023_365201_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|365197_366199_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|366195_367128_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|367372_367489_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691736.1|367504_369424_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_000336323.1|369542_369710_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|369769_370123_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|370627_371050_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|371046_371277_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|371737_371941_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|372022_373240_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000902814.1|373504_373894_-	YisL family protein	NA	NA	NA	NA	NA
WP_000670757.1|374220_375123_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_000154905.1|375288_378942_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.7	7.0e-25
390469:390486	attR	TCTGTGTTGGGGCCCCGC	NA	NA	NA	NA
>prophage 4
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	518591	532907	2858690		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000616865.1|518591_519353_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.2e-17
WP_001245567.1|519349_520306_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.6e-05
WP_000876311.1|520292_521264_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
WP_000562498.1|521633_522605_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|522724_524830_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|524792_525191_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068490.1|525992_526859_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930016.1|526878_527379_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.2	2.7e-52
WP_000193750.1|527718_529224_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_014936998.1|529295_529403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429003.1|529493_530411_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.8e-07
WP_000197271.1|531147_531690_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663034.1|531848_532907_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.9	1.5e-20
>prophage 5
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	544876	552696	2858690		Pandoravirus(16.67%)	10	NA	NA
WP_001217786.1|544876_546028_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
WP_000604516.1|546011_546605_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	3.1e-39
WP_000446724.1|546955_547624_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|547625_548045_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062967.1|548048_548762_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	5.0e-52
WP_000637685.1|548860_549445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093559.1|549725_550166_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037805.1|550506_550980_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|550954_551641_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|551640_552696_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
>prophage 6
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	884086	895791	2858690	integrase	Staphylococcus_phage(30.0%)	14	878831:878851	892750:892770
878831:878851	attL	TATATATAATTATTCCCACTC	NA	NA	NA	NA
WP_031905601.1|884086_884578_-	pathogenicity island protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	41.1	2.3e-24
WP_031905600.1|884762_885821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000884055.1|885807_886014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001081426.1|886238_886583_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	5.5e-41
WP_031905599.1|887255_889628_-	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	41.2	8.0e-147
WP_031867740.1|889719_890019_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	76.8	4.6e-36
WP_001058503.1|890019_890244_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	61.8	3.0e-16
WP_162852058.1|890236_890383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000080597.1|890429_890690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031905598.1|890686_890926_-	helix-turn-helix transcriptional regulator	NA	Q38329	Lactococcus_phage	41.4	2.3e-09
WP_031588064.1|891058_891445_+	helix-turn-helix transcriptional regulator	NA	U3PIS7	Lactobacillus_phage	41.2	3.8e-06
WP_031905597.1|891528_892665_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	42.2	3.9e-75
WP_000424968.1|892758_894300_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
892750:892770	attR	TATATATAATTATTCCCACTC	NA	NA	NA	NA
WP_000264071.1|894324_895791_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 7
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	2051789	2122804	2858690	capsid,integrase,head,terminase,holin,transposase,protease,portal,tail	Staphylococcus_phage(94.37%)	92	2063156:2063173	2131559:2131576
WP_000197638.1|2051789_2052533_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000917289.1|2052707_2052992_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2053067_2054684_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000201398.1|2055224_2055404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000216896.1|2055400_2056027_+	hypothetical protein	NA	C8CH40	Staphylococcus_phage	44.5	2.4e-42
WP_001045074.1|2056565_2057873_-	potassium transporter KtrB	NA	NA	NA	NA	NA
WP_000206618.1|2058255_2059479_-	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000791397.1|2059910_2060966_+	leukocidin/hemolysin toxin family protein	NA	A0A2I6PER8	Staphylococcus_phage	35.4	8.7e-37
WP_000595612.1|2060987_2062004_+	leukocidin/hemolysin toxin family protein	NA	A0A2I6PER8	Staphylococcus_phage	29.3	1.1e-25
WP_000857191.1|2063146_2064184_-|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
2063156:2063173	attL	TTCTAAAATTTTAGTTGT	NA	NA	NA	NA
WP_000825947.1|2064242_2064707_-	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000705248.1|2064806_2064989_-	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000591749.1|2065192_2065534_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000759682.1|2065539_2066472_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_001031454.1|2066487_2067201_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_001801500.1|2067163_2067337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000854073.1|2067333_2067597_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	98.9	2.1e-40
WP_001025404.1|2067612_2067828_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128907.1|2067816_2068146_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001148605.1|2068196_2068949_+	phage antirepressor KilAC domain-containing protein	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148862.1|2068964_2069162_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_000762519.1|2069148_2069529_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	99.2	3.4e-68
WP_001120201.1|2069583_2069907_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2069903_2070065_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2070159_2070462_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2070466_2070727_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2070735_2070999_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700555.1|2071007_2072951_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
WP_000138475.1|2072952_2073873_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_114668451.1|2073953_2074571_+	MBL fold metallo-hydrolase	NA	A0A2I6PDI9	Staphylococcus_phage	99.4	4.5e-86
WP_000610648.1|2074571_2075042_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	98.7	1.3e-80
WP_000148321.1|2075071_2075965_+	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.3	5.5e-141
WP_000338530.1|2075971_2076190_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000401960.1|2076198_2076603_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.9e-72
WP_000101288.1|2076615_2076984_+	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_000131370.1|2076987_2077230_+	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_001065097.1|2077244_2077499_+	DUF1024 family protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
WP_000714403.1|2077485_2077656_+	hypothetical protein	NA	A0A0H3U4U6	Staphylococcus_phage	100.0	8.2e-22
WP_001066447.1|2077648_2078185_+	dUTP diphosphatase	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
WP_001282074.1|2078221_2078467_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_000195803.1|2078463_2078670_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592207.1|2078666_2079053_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000595265.1|2079049_2079199_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001622114.1|2079198_2079399_+	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
WP_000590122.1|2079426_2079843_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|2080074_2080374_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000402904.1|2080504_2080849_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000625088.1|2080845_2082507_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|2082522_2083710_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642728.1|2083693_2084431_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000154559.1|2084454_2085600_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|2085619_2085904_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|2085893_2086178_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|2086161_2086524_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114227.1|2086520_2086925_+	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	99.3	2.1e-68
WP_000565498.1|2086921_2087329_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268733.1|2087329_2087974_+|tail	phage tail protein	tail	A0A1X9H0J2	Staphylococcus_phage	100.0	1.5e-119
WP_071621395.1|2088015_2088240_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|2088289_2088640_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001549167.1|2088690_2088828_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001796452.1|2088884_2093414_+|tail	phage tail tape measure protein	tail	A0A2I6PDK2	Staphylococcus_phage	99.8	0.0e+00
WP_000567408.1|2093410_2094895_+|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_000582165.1|2094910_2098696_+	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.5	0.0e+00
WP_001153681.1|2098685_2098838_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|2098884_2099172_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|2099229_2099526_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|2099675_2099852_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|2099904_2100012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|2100063_2100318_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_064131634.1|2100329_2101085_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	99.6	5.8e-152
WP_000919350.1|2101275_2101767_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000702263.1|2103981_2104332_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|2104384_2104645_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|2104955_2105135_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_000669725.1|2106092_2108162_+	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_001068535.1|2108432_2109719_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|2109918_2110017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681966.1|2110258_2110435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691584.1|2110692_2111073_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991294.1|2111069_2111966_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.7	6.5e-17
WP_000645735.1|2111966_2112647_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763048.1|2112643_2113516_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_001221650.1|2113515_2114256_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|2114319_2114883_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966291.1|2115003_2115528_+	membrane protein	NA	NA	NA	NA	NA
WP_001033968.1|2115587_2116145_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713062.1|2116141_2116984_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188070.1|2117040_2118081_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000267034.1|2118531_2118705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000706213.1|2119251_2120364_+|integrase	tyrosine-type recombinase/integrase	integrase	P97010	Streptococcus_pyogenes_phage	31.6	1.7e-11
WP_000026850.1|2120366_2122430_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000410574.1|2122438_2122804_+|transposase	transposase	transposase	NA	NA	NA	NA
2131559:2131576	attR	ACAACTAAAATTTTAGAA	NA	NA	NA	NA
>prophage 8
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	2247419	2295166	2858690	transposase,protease,tRNA	Staphylococcus_phage(91.89%)	47	NA	NA
WP_000196442.1|2247419_2247701_+|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	63.4	3.2e-23
WP_000070813.1|2248149_2248533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|2248543_2248720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000864133.1|2249090_2249648_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	98.1	1.1e-78
WP_000414230.1|2249845_2250418_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	3.5e-24
WP_000627549.1|2250515_2250860_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	96.5	5.1e-55
WP_000669036.1|2250900_2251527_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	9.9e-81
WP_000070644.1|2251602_2252598_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	94.8	1.3e-69
WP_001825423.1|2252678_2253341_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	87.7	2.8e-49
WP_016187363.1|2253643_2254099_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	96.6	8.3e-77
WP_000348381.1|2254257_2255736_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	95.5	6.7e-277
WP_000778553.1|2255740_2256742_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	86.5	3.3e-163
WP_000718107.1|2256738_2256996_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|2257061_2257535_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_016187361.1|2257539_2258286_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.0	7.8e-141
WP_000109913.1|2258582_2260175_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.6	0.0e+00
WP_000933822.1|2260546_2261740_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366160.1|2261864_2262773_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.3	1.3e-137
WP_000453302.1|2262984_2263818_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.9	1.7e-157
WP_000623484.1|2264067_2264421_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	82.1	2.3e-18
WP_001200546.1|2264417_2264783_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.9e-58
WP_000091443.1|2265037_2265340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|2265598_2266312_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000492903.1|2266767_2267388_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001168915.1|2267554_2268190_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001030474.1|2268487_2268931_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	77.9	1.4e-49
WP_001153741.1|2268917_2269361_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671058.1|2269473_2269944_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	84.6	5.0e-69
WP_000384171.1|2270142_2270367_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032832.1|2270642_2271497_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989103.1|2271583_2272876_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.7	7.5e-216
WP_000221190.1|2272875_2273190_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
WP_001261672.1|2273840_2275343_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	5.0e-30
WP_000077346.1|2275823_2276867_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.1	3.1e-196
WP_000493892.1|2276873_2277506_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_001159034.1|2277516_2278698_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	1.9e-226
WP_001008555.1|2278710_2279169_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	97.4	4.1e-68
WP_001196354.1|2279296_2280298_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_014937042.1|2280409_2280529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|2280531_2281359_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|2281931_2282333_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764426.1|2282451_2283015_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	95.7	7.3e-99
WP_000526541.1|2283011_2283965_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	6.4e-79
WP_001025064.1|2284074_2285256_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	9.6e-218
WP_001807819.1|2285543_2287961_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
WP_000836471.1|2287982_2288294_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	95.1	1.3e-49
WP_001050515.1|2288617_2295166_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	95.1	5.7e-296
>prophage 9
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	2497367	2505679	2858690	tRNA	Caulobacter_phage(16.67%)	7	NA	NA
WP_001217255.1|2497367_2499167_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
WP_001283055.1|2499390_2500497_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624563.1|2500627_2501305_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683941.1|2501307_2502408_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_001062170.1|2502521_2503868_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	3.4e-54
WP_000924214.1|2503877_2504768_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|2504893_2505679_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
>prophage 10
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	2560801	2650332	2858690	capsid,plate,integrase,head,terminase,holin,portal,protease,tRNA,tail	Staphylococcus_phage(74.7%)	111	2563552:2563569	2615379:2615396
WP_000064078.1|2560801_2561527_+	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987760.1|2561507_2563259_+	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.3	1.3e-21
WP_001825329.1|2563503_2564433_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
2563552:2563569	attL	GGATGTTCCACGATGGAA	NA	NA	NA	NA
WP_014532489.1|2564425_2566453_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	95.3	2.7e-111
WP_031585161.1|2566495_2567701_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	99.8	3.8e-222
WP_001568848.1|2567826_2568441_+	phage protein	NA	A7TW88	Staphylococcus_phage	99.5	1.0e-106
WP_001795334.1|2568437_2568584_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000825948.1|2568813_2569398_-	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	100.0	1.4e-68
WP_000525004.1|2569415_2569877_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333630.1|2569889_2570204_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_001121027.1|2570355_2570592_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|2570605_2571382_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_000771849.1|2571410_2571560_+	hypothetical protein	NA	D2JGJ0	Staphylococcus_phage	100.0	1.4e-20
WP_000362644.1|2571600_2571813_-	hypothetical protein	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
WP_001148860.1|2571882_2572080_+	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
WP_000773059.1|2572066_2572447_-	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
WP_001025401.1|2572501_2572747_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|2572715_2573081_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|2573135_2573351_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_016187436.1|2573375_2573639_+	helix-turn-helix domain-containing protein	NA	M9QRR6	Staphylococcus_phage	100.0	9.7e-46
WP_001285948.1|2573651_2573813_+	DUF1270 domain-containing protein	NA	A9CR58	Staphylococcus_phage	98.1	1.1e-20
WP_000174994.1|2573891_2574215_+	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	100.0	5.9e-53
WP_031863778.1|2574229_2574592_+	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	98.3	7.1e-55
WP_031775793.1|2574588_2575755_+	DUF2800 domain-containing protein	NA	Q8SDR9	Staphylococcus_virus	99.2	2.2e-219
WP_000647288.1|2575781_2576336_+	DUF2815 family protein	NA	M9QRS1	Staphylococcus_phage	100.0	1.4e-99
WP_114668462.1|2576404_2578357_+	DNA polymerase	NA	M9QT72	Staphylococcus_phage	98.8	0.0e+00
WP_079219803.1|2578368_2578530_+	hypothetical protein	NA	A7TWH0	Staphylococcus_phage	100.0	1.7e-21
WP_114668454.1|2578538_2578787_+	hypothetical protein	NA	A7TWH1	Staphylococcus_phage	93.9	2.4e-38
WP_000693989.1|2578800_2579007_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_000695771.1|2579009_2579417_+	hypothetical protein	NA	M9NST1	Staphylococcus_phage	98.5	2.6e-74
WP_000983950.1|2579413_2579608_+	hypothetical protein	NA	A0A0U2A067	Staphylococcus_phage	96.8	1.4e-25
WP_000982714.1|2579604_2580042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031910183.1|2580038_2580323_+	hypothetical protein	NA	Q9MBR2	Staphylococcus_prophage	93.6	2.2e-43
WP_000370297.1|2580315_2580567_+	DUF1024 family protein	NA	A7TWH5	Staphylococcus_phage	90.5	1.2e-34
WP_000714407.1|2580553_2580724_+	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	100.0	5.7e-23
WP_001066452.1|2580716_2581253_+	dUTP diphosphatase	NA	A0A1W6JPM9	Staphylococcus_phage	100.0	1.2e-95
WP_000195801.1|2581289_2581577_+	DUF1381 domain-containing protein	NA	Q4ZAB6	Staphylococcus_virus	100.0	1.1e-45
WP_000608279.1|2581569_2581806_+	hypothetical protein	NA	A0A0N7E0U3	Staphylococcus_phage	100.0	1.3e-36
WP_001568228.1|2581795_2582185_+	hypothetical protein	NA	M9QX07	Staphylococcus_phage	100.0	2.8e-65
WP_000595260.1|2582181_2582334_+	transcriptional activator RinB	NA	A7TWI2	Staphylococcus_phage	100.0	2.6e-19
WP_031794940.1|2582401_2582602_+	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	98.5	3.8e-26
WP_000884844.1|2582653_2585101_+	virulence-associated E family protein	NA	R4WAL1	Staphylococcus_phage	100.0	0.0e+00
WP_001801650.1|2585209_2585308_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
WP_000665203.1|2585441_2585732_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_078100893.1|2585712_2587080_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	98.9	1.1e-260
WP_000513702.1|2587092_2587530_+	transcriptional regulator	NA	B7T0I6	Staphylococcus_virus	100.0	6.1e-77
WP_015994756.1|2587686_2588001_+	HNH endonuclease	NA	A0A0K1LL59	Staphylococcus_phage	100.0	4.2e-56
WP_000778933.1|2588126_2588432_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000153552.1|2588421_2590113_+|terminase	terminase large subunit	terminase	A0A2I6PE99	Staphylococcus_phage	98.8	0.0e+00
WP_001100664.1|2590117_2591356_+|portal	phage portal protein	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
WP_021285854.1|2591339_2592113_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	99.6	9.2e-137
WP_031794937.1|2592124_2593288_+|capsid	phage major capsid protein	capsid	M9QQM0	Staphylococcus_phage	99.7	2.1e-217
WP_000050973.1|2593356_2593635_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_016187452.1|2593646_2593979_+	hypothetical protein	NA	M9QX19	Staphylococcus_phage	100.0	1.1e-57
WP_031794936.1|2593975_2594377_+	phage protein	NA	A0A0K1LL98	Staphylococcus_phage	99.2	4.0e-67
WP_001023808.1|2594377_2594773_+	DUF3168 domain-containing protein	NA	A0A0K1LKC0	Staphylococcus_phage	100.0	5.1e-67
WP_000807536.1|2594807_2595449_+|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_000169128.1|2595540_2595996_+	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_031775785.1|2596053_2596404_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	99.1	2.0e-54
WP_000438833.1|2596445_2596604_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_079219800.1|2596617_2602818_+|tail	phage tail tape measure protein	tail	A0A1X9IGU9	Staphylococcus_phage	97.8	0.0e+00
WP_031775783.1|2602817_2603642_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	7.0e-159
WP_000384460.1|2603650_2605234_+|tail	phage tail protein	tail	Q4ZD01	Staphylococcus_virus	99.8	3.5e-308
WP_000179864.1|2605233_2605524_+	hypothetical protein	NA	R4WEC3	Staphylococcus_phage	100.0	2.1e-49
WP_000429556.1|2605539_2607450_+	hypothetical protein	NA	A0A2I6PF35	Staphylococcus_phage	99.2	0.0e+00
WP_031776075.1|2607449_2608916_+|plate	phage baseplate upper protein	plate	A0A2I6PES7	Staphylococcus_phage	99.8	4.4e-273
WP_001166606.1|2608915_2609305_+	DUF2977 domain-containing protein	NA	Q4ZCZ7	Staphylococcus_virus	95.3	5.4e-61
WP_000916022.1|2609297_2609462_+	XkdX family protein	NA	M9QX31	Staphylococcus_phage	98.1	1.9e-23
WP_000466774.1|2609507_2609807_+	DUF2951 family protein	NA	M9QRV2	Staphylococcus_phage	100.0	2.6e-31
WP_000354117.1|2609942_2610380_+|holin	phage holin	holin	M9QTA6	Staphylococcus_phage	97.9	3.8e-71
WP_001148129.1|2610360_2611806_+	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	96.9	1.7e-288
WP_000201920.1|2612708_2612888_+	hypothetical protein	NA	M9QYR8	Staphylococcus_phage	100.0	4.1e-24
WP_000455173.1|2612909_2613437_+	DUF4065 domain-containing protein	NA	M9QX37	Staphylococcus_phage	100.0	3.4e-98
WP_016187462.1|2613408_2613825_+	hypothetical protein	NA	M9QRV7	Staphylococcus_phage	100.0	6.4e-76
WP_000126130.1|2614040_2614256_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_001825313.1|2614346_2615276_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001807840.1|2615330_2616227_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
2615379:2615396	attR	GGATGTTCCACGATGGAA	NA	NA	NA	NA
WP_001825312.1|2616681_2617614_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186909.1|2618017_2618563_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151997.1|2618668_2618917_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|2619024_2619978_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_114668456.1|2619967_2621347_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.8	2.4e-55
WP_000069278.1|2621499_2622954_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_001807838.1|2623079_2623196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001174257.1|2623356_2624343_+	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_000681742.1|2624457_2625426_-	asparaginase	NA	NA	NA	NA	NA
WP_000644390.1|2625502_2626162_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_001807839.1|2626192_2626309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001825307.1|2626425_2626617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000133960.1|2626873_2628049_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000165530.1|2628270_2629581_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000161737.1|2629597_2630596_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001043863.1|2630766_2631039_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|2631469_2632042_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774681.1|2632044_2632770_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001096479.1|2632771_2633731_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|2633822_2634272_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|2634477_2634678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269939.1|2635064_2636231_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.3	2.6e-34
WP_000776339.1|2636256_2637321_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_000245908.1|2637330_2638629_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000389530.1|2638635_2639880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000005220.1|2639893_2640469_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	1.6e-08
WP_000154694.1|2640458_2641046_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_031774809.1|2641117_2641798_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000839926.1|2642132_2642450_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000690021.1|2642693_2643836_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000361538.1|2643840_2645043_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	7.1e-35
WP_000049916.1|2645029_2646001_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525056.1|2646024_2648718_+	ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	34.3	1.4e-46
WP_000858789.1|2649039_2650332_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
>prophage 11
NZ_LT992456	Staphylococcus aureus isolate 1_1439 chromosome I	2858690	2827092	2832280	2858690		Staphylococcus_phage(66.67%)	8	NA	NA
WP_001215406.1|2827092_2827266_+	hypothetical protein	NA	A0A059NT83	Lactococcus_phage	51.9	3.6e-09
WP_000974166.1|2827329_2827914_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	42.6	4.4e-30
WP_000477490.1|2828345_2828762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|2829272_2829458_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|2829850_2829961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002341.1|2830661_2830868_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	55.2	5.5e-12
WP_074347689.1|2831168_2831396_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.1	1.9e-18
WP_001807853.1|2832082_2832280_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
