assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900324435.1_48853_F01	NZ_LT992490	Vibrio cholerae strain 4295STDY6534200 chromosome 1	1	2645278-2645521	1	PILER-CR	no		WYL,cas3,DEDDh,csa3,DinG,csx1,TnsE_C	Orphan	AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	49	0	0	NA	NA	NA	2	2	Orphan	WYL,cas3,DEDDh,csa3,DinG,csx1,TnsE_C	NA,NA	NA|186aa|up_9|NZ_LT992490.1_2636979_2637537_+	COG0762, COG0762, Predicted integral membrane protein [Function unknown]	NA|97aa|up_8|NZ_LT992490.1_2637536_2637827_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|144aa|up_7|NZ_LT992490.1_2637872_2638304_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|201aa|up_6|NZ_LT992490.1_2638373_2638976_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|392aa|up_5|NZ_LT992490.1_2638969_2640145_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|307aa|up_4|NZ_LT992490.1_2640376_2641297_-	PRK00971, PRK00971, glutaminase; Provisional	NA|240aa|up_3|NZ_LT992490.1_2641407_2642127_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|354aa|up_2|NZ_LT992490.1_2642365_2643427_+	PRK10880, PRK10880, adenine DNA glycosylase	NA|91aa|up_1|NZ_LT992490.1_2643440_2643713_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|377aa|up_0|NZ_LT992490.1_2643907_2645038_+	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC	NA|542aa|down_0|NZ_LT992490.1_2645811_2647437_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|285aa|down_1|NZ_LT992490.1_2648484_2649339_-	PRK09430, djlA, co-chaperone DjlA	NA|798aa|down_2|NZ_LT992490.1_2649497_2651891_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|432aa|down_3|NZ_LT992490.1_2651943_2653239_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|331aa|down_4|NZ_LT992490.1_2653228_2654221_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|272aa|down_5|NZ_LT992490.1_2654234_2655050_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|127aa|down_6|NZ_LT992490.1_2655131_2655512_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|270aa|down_7|NZ_LT992490.1_2655522_2656332_+	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|166aa|down_8|NZ_LT992490.1_2656480_2656978_-	pfam00186, DHFR_1, Dihydrofolate reductase	NA|158aa|down_9|NZ_LT992490.1_2656990_2657464_-	PRK09917, PRK09917, threonine/serine exporter
GCF_900324435.1_48853_F01	NZ_LT992491	Vibrio cholerae strain 4295STDY6534200 chromosome 2	1	837677-837760	1	CRISPRCasFinder	no		cas3,csa3	Orphan	TAAGCTGCCTGTGCGGCAGTGAAC	24	0	0	NA	NA	I-F	1	1	Orphan	WYL,cas3,DEDDh,csa3,DinG,csx1,TnsE_C	NA|13aa|up_5|NZ_LT992491.1_834372_834411_-,NA|290aa|down_2|NZ_LT992491.1_839670_840540_-	NA|91aa|up_9|NZ_LT992491.1_829620_829893_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|166aa|up_8|NZ_LT992491.1_829889_830387_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|476aa|up_7|NZ_LT992491.1_830909_832336_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|153aa|up_6|NZ_LT992491.1_833176_833635_-	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|13aa|up_5|NZ_LT992491.1_834372_834411_-	NA	NA|42aa|up_4|NZ_LT992491.1_834429_834555_-	pfam04875, DUF645, Protein of unknown function, DUF645	NA|61aa|up_3|NZ_LT992491.1_834909_835092_-	pfam04875, DUF645, Protein of unknown function, DUF645	NA|129aa|up_2|NZ_LT992491.1_835387_835774_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|79aa|up_1|NZ_LT992491.1_836491_836728_-	pfam12493, DUF3709, Protein of unknown function (DUF3709)	NA|47aa|up_0|NZ_LT992491.1_836880_837021_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|95aa|down_0|NZ_LT992491.1_838570_838855_-	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|83aa|down_1|NZ_LT992491.1_839170_839419_-	pfam12493, DUF3709, Protein of unknown function (DUF3709)	NA|290aa|down_2|NZ_LT992491.1_839670_840540_-	NA	NA|73aa|down_3|NZ_LT992491.1_840810_841029_-	pfam12493, DUF3709, Protein of unknown function (DUF3709)	NA|61aa|down_4|NZ_LT992491.1_841375_841558_-	pfam04875, DUF645, Protein of unknown function, DUF645	NA|81aa|down_5|NZ_LT992491.1_841926_842169_+	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	NA|100aa|down_6|NZ_LT992491.1_842165_842465_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|107aa|down_7|NZ_LT992491.1_842502_842823_-	pfam04875, DUF645, Protein of unknown function, DUF645	NA|96aa|down_8|NZ_LT992491.1_843663_843951_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|84aa|down_9|NZ_LT992491.1_843940_844192_-	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]
GCF_900324435.1_48853_F01	NZ_LT992491	Vibrio cholerae strain 4295STDY6534200 chromosome 2	2	851820-852447	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3	Orphan	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	10,10,10	10	Orphan	WYL,cas3,DEDDh,csa3,DinG,csx1,TnsE_C	NA|142aa|up_8|NZ_LT992491.1_847347_847773_-,NA|173aa|up_7|NZ_LT992491.1_848007_848526_-,NA|66aa|up_4|NZ_LT992491.1_850090_850288_-,NA|35aa|up_3|NZ_LT992491.1_850281_850386_-,NA|94aa|up_0|NZ_LT992491.1_851346_851628_-,NA|274aa|down_0|NZ_LT992491.1_852711_853533_-,NA|128aa|down_1|NZ_LT992491.1_853703_854087_-,NA|61aa|down_3|NZ_LT992491.1_854618_854801_-,NA|247aa|down_7|NZ_LT992491.1_856003_856744_+	NA|180aa|up_9|NZ_LT992491.1_846647_847187_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|142aa|up_8|NZ_LT992491.1_847347_847773_-	NA	NA|173aa|up_7|NZ_LT992491.1_848007_848526_-	NA	NA|180aa|up_6|NZ_LT992491.1_848700_849240_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|76aa|up_5|NZ_LT992491.1_849548_849776_-	COG3313, COG3313, Predicted Fe-S protein [General function prediction only]	NA|66aa|up_4|NZ_LT992491.1_850090_850288_-	NA	NA|35aa|up_3|NZ_LT992491.1_850281_850386_-	NA	NA|101aa|up_2|NZ_LT992491.1_850551_850854_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|86aa|up_1|NZ_LT992491.1_850841_851099_-	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|94aa|up_0|NZ_LT992491.1_851346_851628_-	NA	NA|274aa|down_0|NZ_LT992491.1_852711_853533_-	NA	NA|128aa|down_1|NZ_LT992491.1_853703_854087_-	NA	NA|87aa|down_2|NZ_LT992491.1_854364_854625_-	pfam12493, DUF3709, Protein of unknown function (DUF3709)	NA|61aa|down_3|NZ_LT992491.1_854618_854801_-	NA	NA|37aa|down_4|NZ_LT992491.1_854760_854871_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|308aa|down_5|NZ_LT992491.1_854878_855802_-	pfam18739, HEPN_Apea, Apea-like HEPN	NA|34aa|down_6|NZ_LT992491.1_855867_855969_-	pfam11665, DUF3265, Protein of unknown function (DUF3265)	NA|247aa|down_7|NZ_LT992491.1_856003_856744_+	NA	NA|76aa|down_8|NZ_LT992491.1_856915_857143_-	pfam14375, Cys_rich_CWC, Cysteine-rich CWC	NA|60aa|down_9|NZ_LT992491.1_857625_857805_-	pfam04875, DUF645, Protein of unknown function, DUF645
