The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	410230	426921	2935845	integrase,terminase,coat	Staphylococcus_phage(100.0%)	28	399707:399721	419591:419605
399707:399721	attL	TGAATTGGTGCATCA	NA	NA	NA	NA
WP_001052483.1|410230_410422_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001261460.1|410665_410962_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000934799.1|410982_411486_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_000897044.1|411537_411780_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_000119675.1|412008_412806_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q4ZE81	Staphylococcus_phage	100.0	7.1e-108
WP_015977853.1|412829_414044_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	100.0	4.0e-227
WP_000230361.1|414204_414828_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001611932.1|414976_415141_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001138305.1|415141_415414_+	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	94.4	1.2e-43
WP_000784892.1|415425_415599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001231376.1|415565_415769_+	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	98.5	2.0e-30
WP_031788845.1|415770_416154_+	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.9	1.3e-62
WP_061731591.1|416154_416481_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	94.4	1.1e-51
WP_061642140.1|416544_417414_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	93.1	6.9e-157
WP_000390455.1|417430_418888_+	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	96.1	1.0e-277
WP_001039168.1|419188_419551_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
WP_000998181.1|419552_419837_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
419591:419605	attR	TGATGCACCAATTCA	NA	NA	NA	NA
WP_061732984.1|419833_420475_+	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	96.7	3.5e-113
WP_001190614.1|421010_421352_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
WP_048667708.1|421382_422036_+	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	99.1	8.4e-115
WP_048667706.1|422088_422616_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	97.7	4.9e-89
WP_025174984.1|422747_422960_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	97.1	3.2e-31
WP_001281787.1|422956_423526_+|terminase	terminase small subunit	terminase	A0A1W6JQF0	Staphylococcus_phage	97.9	4.6e-101
WP_000624990.1|423954_424473_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000591858.1|424469_424898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000705255.1|424884_425664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001577971.1|426009_426291_+	hypothetical protein	NA	Q4ZE84	Staphylococcus_phage	85.0	3.7e-19
WP_000813311.1|426408_426921_+	hypothetical protein	NA	Q4ZE83	Staphylococcus_phage	100.0	1.4e-69
>prophage 2
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	773163	780984	2935845		Hokovirus(16.67%)	10	NA	NA
WP_000244412.1|773163_774219_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
WP_000149344.1|774218_774905_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|774879_775353_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|775695_776136_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|776415_777000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|777098_777812_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|777815_778235_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|778236_778905_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|779255_779849_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217785.1|779832_780984_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 3
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	792956	807743	2935845		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|792956_794015_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197271.1|794365_794908_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429014.1|795587_796505_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_001790641.1|796595_796697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|796774_798280_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|798620_799121_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|799140_800007_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|800807_801206_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|801168_803274_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|803391_804363_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|804876_805032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|805070_806042_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|806028_806985_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616842.1|806981_807743_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 4
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	982638	1037745	2935845	protease,bacteriocin,transposase,tRNA	Streptococcus_phage(28.57%)	53	NA	NA
WP_061642072.1|982638_983628_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|983922_984318_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217730.1|984688_985408_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000082731.1|986561_988370_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	9.3e-47
WP_000896697.1|988829_989636_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214065.1|989658_990024_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224622.1|990127_990721_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242102.1|990906_991254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|991270_991906_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|991922_992732_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669939.1|992728_993583_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062417.1|993603_994989_+	magnesium transporter	NA	NA	NA	NA	NA
WP_061642071.1|994998_996843_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|997120_997891_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|998085_999171_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570699.1|999512_1001081_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_001288681.1|1001222_1001981_+	esterase family protein	NA	NA	NA	NA	NA
WP_000600392.1|1002174_1002684_+	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_001154222.1|1002796_1003987_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|1003964_1005140_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340118.1|1005572_1007054_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|1007037_1007298_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049959.1|1007297_1008860_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	4.9e-36
WP_000928413.1|1009161_1009965_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_078161767.1|1010183_1012508_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000021864.1|1012524_1013883_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414177.1|1014021_1015533_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1016019_1016589_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1016798_1017017_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|1017097_1018084_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000195429.1|1018239_1019412_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000214898.1|1019614_1019791_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1019805_1020408_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001790623.1|1021324_1021426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790097.1|1021435_1021708_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870806.1|1021751_1023716_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668623.1|1023718_1024039_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571178.1|1024035_1024677_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
WP_001795544.1|1024764_1025055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015581814.1|1025333_1025621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000719184.1|1025626_1027108_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|1027196_1027553_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|1028029_1028989_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|1029034_1029166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|1029229_1029445_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620953.1|1029609_1030161_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|1030212_1031151_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190623.1|1031332_1032694_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526687.1|1032680_1034354_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150195.1|1034340_1035144_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_061642051.1|1035136_1035958_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284457.1|1036196_1036526_-	staphostatin B	NA	NA	NA	NA	NA
WP_001088780.1|1036563_1037745_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 5
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1057731	1066204	2935845		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|1057731_1058214_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010412.1|1058200_1059325_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1059328_1060033_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1060032_1060296_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_015581815.1|1060297_1060969_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032727.1|1060961_1063151_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000483713.1|1063129_1064614_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030812.1|1064606_1065635_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238664.1|1065637_1066204_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 6
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1426584	1479805	2935845	lysis,transposase	Staphylococcus_phage(35.71%)	37	NA	NA
WP_000195429.1|1426584_1427757_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000809131.1|1428189_1428390_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000269923.1|1428560_1428869_-	DUF1033 family protein	NA	NA	NA	NA	NA
WP_001215907.1|1429031_1429301_+	acylphosphatase	NA	NA	NA	NA	NA
WP_001788788.1|1429319_1429949_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_000138413.1|1429980_1431117_+	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	7.4e-34
WP_001039275.1|1432129_1433473_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_061642129.1|1433697_1435584_-	nitric oxide reductase activation protein NorD	NA	NA	NA	NA	NA
WP_061642128.1|1435597_1436389_-	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
WP_000902175.1|1436569_1436773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061642127.1|1436801_1437611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001115440.1|1438190_1439459_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_061642126.1|1439472_1442271_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_000195429.1|1442396_1443569_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000166801.1|1443886_1445242_-	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
WP_000192137.1|1445238_1445898_-	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_001788795.1|1446159_1446291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000093392.1|1446810_1447296_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_111769689.1|1447426_1448041_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000160904.1|1448057_1449128_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_000620194.1|1449139_1449649_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000342125.1|1450048_1451539_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
WP_000801007.1|1451730_1451952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000473652.1|1451951_1452452_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000913315.1|1452463_1452892_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000159902.1|1452884_1453418_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000166059.1|1453503_1454343_-	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
WP_000175746.1|1454357_1454837_-	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000934885.1|1455036_1455993_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000995287.1|1456416_1456854_-	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000404650.1|1456869_1457994_-	virulence factor C	NA	NA	NA	NA	NA
WP_000691942.1|1458031_1458283_-	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_001795441.1|1458294_1458489_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000282171.1|1458733_1459438_+	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001062936.1|1459978_1460380_+	ribonuclease HI family protein	NA	NA	NA	NA	NA
WP_078055982.1|1478784_1479321_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	43.6	7.6e-29
WP_000746372.1|1479301_1479805_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1528729	1577793	2935845	tail,holin,plate,tRNA,transposase	Staphylococcus_phage(47.83%)	49	NA	NA
WP_000858789.1|1528729_1530022_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
WP_000525078.1|1530343_1533037_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000049919.1|1533060_1534032_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361544.1|1534018_1535221_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_061642078.1|1535225_1536368_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1536608_1536926_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1537262_1537943_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000004947.1|1538590_1539166_-	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
WP_015581847.1|1539179_1540424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245895.1|1540430_1541729_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776323.1|1541738_1542803_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269929.1|1542828_1543995_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
WP_000789522.1|1544380_1544581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|1544789_1545239_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001096471.1|1545330_1546290_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|1546291_1547017_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450553.1|1547019_1547592_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000195429.1|1547765_1548938_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000284571.1|1549488_1551093_+|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
WP_001043863.1|1551208_1551481_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161738.1|1551651_1552650_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1552666_1553977_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133954.1|1554198_1555374_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_001789944.1|1555630_1555822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001789945.1|1555938_1556055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644395.1|1556085_1556745_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_061642130.1|1556821_1557790_+	asparaginase	NA	NA	NA	NA	NA
WP_001174260.1|1557904_1558891_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001789943.1|1559051_1559168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069282.1|1559292_1560753_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902119.1|1560905_1562285_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
WP_001163801.1|1562274_1563228_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001151997.1|1563335_1563584_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186912.1|1563689_1564235_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001789947.1|1564513_1564633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001033757.1|1565761_1565968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000472936.1|1565960_1566899_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476873.1|1566955_1567873_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000209712.1|1567963_1568179_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_000909205.1|1568900_1570355_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2I6PF47	Staphylococcus_phage	99.6	2.8e-288
WP_000339141.1|1570365_1570668_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000466784.1|1570803_1571103_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000916020.1|1571148_1571313_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|1571305_1571695_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000067132.1|1571694_1573161_-|plate	phage baseplate upper protein	plate	B5WZQ8	Staphylococcus_phage	100.0	7.6e-257
WP_000429558.1|1573160_1575071_-	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000179858.1|1575086_1575377_-	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000384474.1|1575376_1576960_-|tail	phage tail protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_001190533.1|1576968_1577793_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
>prophage 8
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1584006	1619377	2935845	head,tail,terminase,protease,integrase,portal,capsid	Staphylococcus_phage(92.45%)	55	1570887:1570904	1617894:1617911
1570887:1570904	attL	TGTCTCTAATATTTTTAG	NA	NA	NA	NA
WP_000438833.1|1584006_1584165_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589167.1|1584206_1584557_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000169127.1|1584614_1585070_-	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_061732207.1|1585161_1585803_-|tail	phage tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	99.5	8.5e-120
WP_001023806.1|1585837_1586233_-	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
WP_000110023.1|1586233_1586635_-	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
WP_000395498.1|1586631_1586964_-	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
WP_000050973.1|1586975_1587254_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_001142734.1|1587322_1588486_-|capsid	phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
WP_058008059.1|1588497_1589271_-|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	99.6	1.2e-136
WP_001100664.1|1589254_1590493_-|portal	phage portal protein	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
WP_000153544.1|1590497_1592189_-|terminase	terminase large subunit	terminase	Q4ZD20	Staphylococcus_virus	100.0	0.0e+00
WP_000778933.1|1592178_1592484_-|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000160686.1|1592610_1592925_-	HNH endonuclease	NA	A0A2I6PEN4	Staphylococcus_phage	100.0	5.0e-57
WP_000528512.1|1593081_1593519_-	transcriptional regulator	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
WP_001793488.1|1593531_1594899_-	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000665203.1|1594879_1595170_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_001801650.1|1595303_1595402_+	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
WP_061642101.1|1595510_1597958_-	virulence-associated E family protein	NA	A0A2I6PEP4	Staphylococcus_phage	99.8	0.0e+00
WP_000595263.1|1598513_1598666_-	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_001596346.1|1598662_1599052_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.6e-65
WP_000481976.1|1599041_1599278_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	93.6	7.6e-34
WP_000195833.1|1599302_1599539_-	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	92.3	1.9e-32
WP_000028780.1|1599535_1599778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000185680.1|1599814_1600351_-	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_001065083.1|1600343_1600592_-	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
WP_000144708.1|1600584_1600893_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
WP_000979209.1|1600889_1601237_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_061642095.1|1601233_1601635_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	97.0	2.3e-70
WP_061642096.1|1601649_1601898_-	hypothetical protein	NA	Q4ZAR4	Staphylococcus_virus	97.6	1.2e-40
WP_061642097.1|1601898_1602258_-	hypothetical protein	NA	A0A0E3T8L4	Staphylococcus_phage	99.2	2.9e-61
WP_001187249.1|1602258_1602444_-	DUF3113 family protein	NA	A0A0N9BBI1	Staphylococcus_phage	95.1	6.0e-26
WP_000152769.1|1602443_1602599_-	hypothetical protein	NA	A0A2I6PDP0	Staphylococcus_phage	94.1	3.5e-19
WP_076050776.1|1602610_1604563_-	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.7	0.0e+00
WP_000645045.1|1604630_1605188_-	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
WP_000762530.1|1605213_1606380_-	DUF2800 domain-containing protein	NA	B5WZM3	Staphylococcus_phage	100.0	8.3e-222
WP_000985972.1|1606376_1606739_-	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	100.0	8.3e-56
WP_000174998.1|1606753_1607077_-	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
WP_001285954.1|1607155_1607317_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124160.1|1607329_1607593_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001097552.1|1607617_1607833_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001128433.1|1607887_1608253_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001025401.1|1608221_1608467_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001001383.1|1608516_1608735_-	hypothetical protein	NA	B5WZL5	Staphylococcus_phage	100.0	7.8e-33
WP_061642098.1|1609331_1609559_-	hypothetical protein	NA	B5WZL3	Staphylococcus_phage	98.7	2.8e-33
WP_000801423.1|1609730_1610345_+	helix-turn-helix domain-containing protein	NA	B5WZL2	Staphylococcus_phage	100.0	9.0e-111
WP_000348133.1|1610360_1611281_+	3'-5' exoribonuclease	NA	B5WZL1	Staphylococcus_phage	100.0	2.5e-173
WP_000705240.1|1611376_1611559_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001794606.1|1611594_1611741_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	97.9	2.6e-16
WP_000191466.1|1611737_1612352_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_000264751.1|1612477_1613683_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_001566047.1|1613725_1615753_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.7	6.9e-115
WP_001548912.1|1615745_1616675_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987769.1|1616919_1618671_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
1617894:1617911	attR	TGTCTCTAATATTTTTAG	NA	NA	NA	NA
WP_000064078.1|1618651_1619377_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 9
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1675832	1684144	2935845	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_015581861.1|1675832_1676618_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1676743_1677634_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062180.1|1677643_1678990_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000683931.1|1679103_1680204_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|1680206_1680884_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1681014_1682121_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217261.1|1682344_1684144_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 10
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1731776	1788709	2935845	protease,integrase,transposase,tRNA	Streptococcus_phage(42.86%)	55	1768323:1768339	1793283:1793299
WP_000734064.1|1731776_1734407_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_001283311.1|1734749_1737227_-	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000567028.1|1737228_1737897_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_061642011.1|1738358_1739477_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000409167.1|1739477_1740620_-	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.3	8.3e-33
WP_000985886.1|1740931_1741945_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000009238.1|1742181_1742328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000752913.1|1742367_1742550_-	CsbD family protein	NA	NA	NA	NA	NA
WP_000704122.1|1742649_1743072_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000102735.1|1743156_1744431_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.8e-105
WP_000682646.1|1744591_1745365_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_001790559.1|1745364_1745493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000044799.1|1745825_1747592_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_000590826.1|1747607_1748870_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_061642010.1|1749330_1750206_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_044289948.1|1750670_1752860_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.0	5.3e-12
WP_000364542.1|1753287_1753806_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594993.1|1753827_1756101_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000749795.1|1756303_1758583_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1758857_1759118_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1759136_1760276_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_061642009.1|1760298_1761324_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1761325_1762330_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_000271547.1|1762361_1762964_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000368902.1|1762977_1763433_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000496100.1|1763445_1764738_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_000916187.1|1765092_1765377_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_000633692.1|1765388_1765709_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_000457386.1|1765714_1766023_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_001259925.1|1766189_1766720_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_000911041.1|1766719_1767562_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_000840602.1|1767761_1767881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001236735.1|1767954_1768428_-	DUF4930 family protein	NA	NA	NA	NA	NA
1768323:1768339	attL	AATCTTGTTCTTTTAAA	NA	NA	NA	NA
WP_000025835.1|1768587_1768785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000171859.1|1768901_1769186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092058.1|1769634_1770297_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002326825.1|1770959_1771232_-	antitoxin	NA	A0A1X9I6E5	Streptococcus_phage	96.7	5.4e-07
WP_000527318.1|1771249_1771459_-	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	98.6	1.4e-31
WP_025175259.1|1771557_1772454_-	ParA family protein	NA	A0A1X9I765	Streptococcus_phage	96.8	1.2e-151
WP_061730497.1|1772686_1774291_+|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.5e-128
WP_000802831.1|1775011_1775671_-	RibD family protein	NA	A0A1B0RXM8	Streptococcus_phage	100.0	3.1e-125
WP_072387101.1|1775781_1776189_-	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
WP_001079938.1|1776161_1776734_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
WP_001096887.1|1777009_1777804_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_000627290.1|1777896_1778439_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_001255866.1|1778435_1779344_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000662263.1|1779376_1780111_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_000228166.1|1780091_1780961_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000567888.1|1781063_1781309_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_061730497.1|1781435_1783040_-|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.5e-128
WP_001072201.1|1783560_1784292_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_000067268.1|1784417_1785200_-	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	NA	NA	NA
WP_000361059.1|1785350_1785728_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_049291207.1|1785734_1787627_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000868132.1|1787623_1788709_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
1793283:1793299	attR	AATCTTGTTCTTTTAAA	NA	NA	NA	NA
>prophage 11
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	1907386	2031650	2935845	protease,transposase,tRNA	Staphylococcus_phage(89.55%)	113	NA	NA
WP_061642058.1|1907386_1913947_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
WP_000836465.1|1914272_1914584_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001549041.1|1914605_1917023_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_001025060.1|1917318_1918491_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	3.1e-216
WP_000526539.1|1918600_1919554_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1919550_1920114_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1920233_1920635_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1922213_1923041_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1923043_1923163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1923274_1924276_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1924397_1924862_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159022.1|1924874_1926056_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493892.1|1926066_1926699_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000077344.1|1926705_1927749_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
WP_001261677.1|1928229_1929732_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221179.1|1930254_1930569_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_000989121.1|1930568_1931861_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000163235.1|1931878_1932274_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|1932568_1933423_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_061642125.1|1933698_1933923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671052.1|1934121_1934592_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_001153742.1|1934704_1935148_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030465.1|1935134_1935578_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001168904.1|1935873_1936509_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1936948_1937662_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1937921_1938224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1938479_1938845_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623471.1|1938841_1939195_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453320.1|1941277_1942111_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000366154.1|1942322_1943231_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_015581876.1|1943355_1944549_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.2	1.1e-216
WP_000109906.1|1944919_1946512_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000093392.1|1946647_1947133_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_002868962.1|1947507_1948254_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|1948258_1948732_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1948797_1949055_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778523.1|1949051_1950053_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000348360.1|1950057_1951536_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_011443643.1|1951694_1952150_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_001795535.1|1952453_1953104_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_000070653.1|1953184_1954180_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_000669046.1|1954255_1954882_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000627551.1|1954922_1955267_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000414205.1|1955364_1955916_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000494956.1|1956133_1956775_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000809857.1|1956888_1957074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|1957075_1957252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070811.1|1957262_1957646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549059.1|1958249_1958393_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|1958595_1958691_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|1958813_1958915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001037045.1|1959262_1959640_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000284571.1|1960419_1962024_-|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
WP_111769690.1|1963379_1964552_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	99.6	7.7e-135
WP_000195429.1|1966857_1968030_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_061732224.1|1968000_1968339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|1968445_1969618_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000072576.1|1970961_1972161_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
WP_000028659.1|1972153_1973710_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
WP_001791797.1|1973873_1974008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038688.1|1974072_1974792_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001038759.1|1974942_1975659_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_011447030.1|1975760_1975868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|1975816_1976536_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038867.1|1976656_1977376_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001039447.1|1977433_1978156_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001039435.1|1978280_1978988_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_015581877.1|1979952_1980519_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	99.5	1.2e-98
WP_000586140.1|1980992_1981691_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|1981687_1982449_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|1982445_1983138_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|1983160_1984534_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|1984543_1985062_-	flavoprotein	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_061737213.1|1985077_1986322_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	99.8	1.1e-237
WP_001092605.1|1986314_1989308_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000416756.1|1989372_1989516_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000195429.1|1989716_1990889_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000416759.1|1991584_1991728_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000473596.1|1992953_1993889_-	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_001790220.1|1994688_1995228_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000206350.1|1995240_1996029_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
WP_000132890.1|1998485_1999040_-	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000167538.1|1999362_2000763_-	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000162881.1|2000786_2001710_-	ferrochelatase	NA	NA	NA	NA	NA
WP_000233526.1|2001767_2002805_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_001790154.1|2002794_2002905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000737976.1|2003067_2003571_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_001245769.1|2003694_2004918_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000216878.1|2004910_2005651_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000004981.1|2005784_2006207_+	HIT family protein	NA	NA	NA	NA	NA
WP_000648118.1|2006348_2006714_+	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000477959.1|2007446_2008004_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000782121.1|2008208_2009171_+	foldase	NA	NA	NA	NA	NA
WP_001244175.1|2009291_2010233_-	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000584648.1|2010229_2013166_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_015581881.1|2013155_2014352_-	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_001791795.1|2014642_2014741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000290301.1|2015123_2015468_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_000992527.1|2015536_2016661_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000375864.1|2016839_2017304_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001045133.1|2017659_2018283_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000437967.1|2018304_2019417_-	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_000669376.1|2019579_2020401_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000116224.1|2020863_2022249_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000901021.1|2022444_2022840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000031108.1|2023616_2023769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001251224.1|2023793_2024393_-	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000181398.1|2024551_2025022_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_000379978.1|2025026_2026154_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000590809.1|2026304_2027027_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
WP_000649907.1|2027019_2028477_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000063582.1|2028734_2029796_-	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_001549130.1|2030288_2031650_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_LS483301	Staphylococcus aureus strain NCTC13394 chromosome 1	2935845	2077590	2219139	2935845	head,tail,terminase,holin,tRNA,protease,coat,integrase,portal,transposase,capsid	Staphylococcus_phage(79.65%)	171	2177735:2177754	2194604:2194623
WP_000545370.1|2077590_2079018_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_000027928.1|2079030_2080488_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|2080489_2080792_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957015.1|2081158_2082697_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831698.1|2082785_2083985_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774565.1|2083997_2086001_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
WP_000992921.1|2086004_2088197_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_001165363.1|2089062_2089365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2089473_2090769_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827748.1|2091629_2092796_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2092826_2093153_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2093444_2093618_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2093598_2094201_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040873.1|2094471_2095293_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
WP_000284431.1|2095285_2096755_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
WP_000897635.1|2096938_2098015_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001802312.1|2098899_2099007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2099017_2100580_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275730.1|2100784_2101882_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
WP_000149686.1|2102253_2102814_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2102866_2103796_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|2103990_2104164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021214.1|2104215_2105595_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181322.1|2105714_2106743_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2107012_2107414_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2107986_2108160_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188077.1|2108610_2109651_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|2109707_2110550_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2110546_2111104_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2111163_2111688_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2111808_2112372_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2112437_2113178_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|2113177_2114050_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645727.1|2114046_2114727_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991302.1|2114727_2115624_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|2115620_2116001_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2116264_2116441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2116683_2116782_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|2116981_2118268_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000195429.1|2118966_2120139_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001549158.1|2120224_2121979_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669791.1|2122936_2123116_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001791826.1|2123426_2123687_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2123739_2124090_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000195429.1|2124199_2125372_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000920038.1|2126918_2127410_-	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000861038.1|2127600_2128356_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_061642081.1|2128367_2128622_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	97.6	3.4e-40
WP_031762631.1|2128673_2128781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2128833_2129010_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000750412.1|2129118_2129892_-	staphylococcal enterotoxin type A	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
WP_061642082.1|2130264_2130639_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	99.2	7.3e-39
WP_001262621.1|2130694_2130982_-	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_001000058.1|2131027_2131180_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_000582129.1|2131172_2134955_-	hypothetical protein	NA	A0A1X9H096	Staphylococcus_phage	99.3	0.0e+00
WP_001154317.1|2134970_2136461_-|tail	phage tail family protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
WP_001133523.1|2136460_2141110_-|tail	phage tail tape measure protein	tail	A0A1V0E5H1	Staphylococcus_phage	94.3	0.0e+00
WP_000571956.1|2141165_2141288_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	97.5	2.6e-14
WP_000442605.1|2141347_2141794_-	hypothetical protein	NA	O80053	Staphylococcus_phage	92.6	1.3e-69
WP_000570648.1|2141860_2142814_-	Ig-like domain-containing protein	NA	A7TWD0	Staphylococcus_phage	95.0	4.0e-166
WP_000608371.1|2142814_2143195_-	hypothetical protein	NA	Q9MBP5	Staphylococcus_prophage	85.7	2.9e-59
WP_000501242.1|2143191_2143569_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	98.4	3.4e-60
WP_000975314.1|2143568_2143904_-|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
WP_001177483.1|2143890_2144223_-|head,tail	phage head-tail connector protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
WP_001252099.1|2144231_2144390_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_000849950.1|2144425_2145673_-|capsid	phage major capsid protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
WP_000032525.1|2145760_2146345_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
WP_000511067.1|2146337_2147588_-|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	100.0	4.4e-237
WP_000365299.1|2147593_2147794_-	hypothetical protein	NA	A0A1P8L6D3	Staphylococcus_phage	100.0	5.8e-27
WP_000133304.1|2147807_2149502_-|terminase	phage terminase large subunit	terminase	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
WP_000919026.1|2149504_2149972_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
WP_000817289.1|2150100_2150445_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	4.2e-65
WP_000406191.1|2150460_2150913_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	100.0	1.4e-79
WP_000282755.1|2151027_2151498_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	99.3	1.7e-69
WP_001570807.1|2151520_2151721_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
WP_000595265.1|2151720_2151870_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001570808.1|2151869_2152256_-	hypothetical protein	NA	Q4ZBK1	Staphylococcus_phage	98.4	1.5e-63
WP_061642083.1|2152245_2152521_-	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	93.4	3.7e-40
WP_000219344.1|2152474_2152678_-	hypothetical protein	NA	A0A2I6PEQ8	Staphylococcus_phage	97.0	8.3e-29
WP_000195768.1|2152674_2152881_-	DUF1381 domain-containing protein	NA	B7T0C2	Staphylococcus_virus	98.5	4.2e-20
WP_000185669.1|2152917_2153454_-	dUTP diphosphatase	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
WP_001065083.1|2153446_2153695_-	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
WP_001105601.1|2153687_2153972_-	hypothetical protein	NA	E9LT36	Staphylococcus_phage	98.9	1.0e-45
WP_000982705.1|2153968_2154418_-	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	99.3	3.5e-80
WP_000983953.1|2154414_2154609_-	hypothetical protein	NA	A0A0E3XCV8	Staphylococcus_phage	100.0	2.5e-27
WP_000695756.1|2154605_2155010_-	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
WP_000693995.1|2155012_2155219_-	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	98.5	8.7e-34
WP_073546265.1|2155232_2155481_-	hypothetical protein	NA	A0A2I6PDB4	Staphylococcus_phage	93.9	2.8e-39
WP_000022723.1|2155480_2155735_-	DUF3310 domain-containing protein	NA	A0A2K9VBW1	Staphylococcus_phage	97.6	1.4e-41
WP_000907344.1|2155734_2156352_-	hypothetical protein	NA	A0A059T7P3	Staphylococcus_phage	99.0	2.8e-83
WP_001187246.1|2156352_2156538_-	DUF3113 family protein	NA	A0A1X9H053	Staphylococcus_phage	96.7	1.2e-26
WP_000049801.1|2156542_2156947_-	DUF1064 domain-containing protein	NA	G4KNP2	Staphylococcus_phage	99.3	2.1e-68
WP_001123693.1|2156957_2157179_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	97.3	3.2e-34
WP_000628839.1|2157191_2157350_-	hypothetical protein	NA	A0A0H3U301	Staphylococcus_phage	98.1	4.5e-22
WP_000443353.1|2157346_2158132_-	ATP-binding protein	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
WP_000132048.1|2158144_2158876_-	helix-turn-helix domain-containing protein	NA	A0A1J0MGB2	Staphylococcus_phage	79.3	1.2e-80
WP_000414755.1|2158940_2159222_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001081076.1|2159214_2159364_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_001199434.1|2159360_2160032_-	hypothetical protein	NA	A7TWM9	Staphylococcus_phage	98.7	4.9e-126
WP_000704713.1|2160044_2160599_-	single-stranded DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	100.0	1.0e-100
WP_000139741.1|2160628_2161408_-	ATP-binding protein	NA	Q9G028	Staphylococcus_virus	99.6	7.4e-142
WP_000815400.1|2161400_2161622_-	DUF2483 family protein	NA	A0A2H4PQR5	Staphylococcus_phage	100.0	4.2e-34
WP_000291487.1|2161631_2161892_-	DUF1108 family protein	NA	A0A2H4PQR7	Staphylococcus_phage	100.0	3.4e-43
WP_000066020.1|2161984_2162146_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120197.1|2162142_2162463_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|2162521_2163154_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_000939496.1|2163168_2163309_-	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_001148861.1|2163339_2163537_-	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_001148337.1|2163552_2164302_-	phage antirepressor KilAC domain-containing protein	NA	Q8SDM9	Staphylococcus_phage	99.6	4.4e-136
WP_000351243.1|2164358_2164898_+	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_000435341.1|2164921_2165182_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000338186.1|2165199_2165424_-	DUF739 family protein	NA	A7TW90	Staphylococcus_phage	100.0	4.5e-36
WP_001208482.1|2165582_2166353_+	helix-turn-helix domain-containing protein	NA	A0A1P8L6G7	Staphylococcus_phage	100.0	6.2e-141
WP_000705240.1|2166552_2166735_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|2166770_2166917_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|2166913_2167528_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_000857193.1|2167635_2168673_+|integrase	site-specific integrase	integrase	E9LT82	Staphylococcus_phage	93.0	1.0e-178
WP_000595324.1|2169791_2170808_-	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
WP_000791407.1|2170829_2171885_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206638.1|2172319_2173543_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000812008.1|2173914_2174760_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000825510.1|2174821_2175733_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001045079.1|2175893_2177201_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
2177735:2177754	attL	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
WP_061642085.1|2178313_2179249_+	TDT family transporter	NA	NA	NA	NA	NA
WP_078161771.1|2180103_2180388_-	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	57.6	4.3e-23
WP_000195429.1|2181124_2182297_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000591858.1|2182665_2183094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000624990.1|2183090_2183609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001281787.1|2184037_2184607_-|terminase	terminase small subunit	terminase	A0A1W6JQF0	Staphylococcus_phage	97.9	4.6e-101
WP_025174984.1|2184603_2184816_-	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	97.1	3.2e-31
WP_048667706.1|2184947_2185475_-|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	97.7	4.9e-89
WP_048667708.1|2185527_2186181_-	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	99.1	8.4e-115
WP_001190614.1|2186211_2186553_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
WP_111769691.1|2187088_2187730_-	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	95.3	3.8e-112
WP_001003076.1|2187731_2187995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001059599.1|2187996_2188353_-	hypothetical protein	NA	A0A2H4JBD4	uncultured_Caudovirales_phage	78.8	3.0e-50
WP_061642142.1|2188595_2189966_-	DNA primase	NA	A0A2H4JBE3	uncultured_Caudovirales_phage	94.7	1.2e-256
WP_001002722.1|2189977_2190847_-	primase C-terminal domain-containing protein	NA	A0A2H4JEH3	uncultured_Caudovirales_phage	75.8	2.2e-131
WP_001103965.1|2190911_2191238_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	98.1	1.8e-54
WP_000403839.1|2191238_2191622_-	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.1	9.7e-63
WP_001231376.1|2191623_2191827_-	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	98.5	2.0e-30
WP_048667709.1|2191811_2191967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000481967.1|2191963_2192281_-	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	98.1	9.2e-51
WP_000153640.1|2192285_2192504_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
WP_000620857.1|2192676_2193351_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
WP_048667711.1|2193364_2194537_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	98.2	7.8e-220
WP_000240645.1|2194605_2196222_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
2194604:2194623	attR	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
WP_000917289.1|2196297_2196582_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_015581889.1|2196756_2197500_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_061642102.1|2197524_2198784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000522384.1|2198980_2199607_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_000867960.1|2199967_2200753_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
WP_001549197.1|2201349_2201484_-	delta-lysin family phenol-soluble modulin	NA	NA	NA	NA	NA
WP_001105707.1|2201719_2202289_+	accessory gene regulator AgrB	NA	NA	NA	NA	NA
WP_001093929.1|2202285_2202426_+	cyclic lactone autoinducer peptide	NA	NA	NA	NA	NA
WP_001554031.1|2202450_2203743_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_001790167.1|2204548_2204656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001253312.1|2204843_2205803_-	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000141414.1|2205799_2207284_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	4.0e-19
WP_000790330.1|2207432_2208383_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_001052270.1|2208565_2209816_-	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000581077.1|2210022_2210247_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_000266883.1|2210306_2211386_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_001283612.1|2211689_2212325_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000602071.1|2212577_2214506_+	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.4	5.4e-53
WP_001790685.1|2214650_2214779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061642103.1|2214867_2216478_+	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	2.5e-19
WP_000159034.1|2216579_2217605_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.9	6.9e-63
WP_000372758.1|2217597_2218062_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_001086744.1|2218034_2218697_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000590798.1|2218677_2219139_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
