The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	682297	690117	2718283		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|682297_683353_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|683352_684039_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|684013_684487_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093556.1|684828_685269_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|685548_686133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|686231_686945_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|686948_687368_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|687369_688038_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604515.1|688388_688982_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
WP_001217794.1|688965_690117_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	3.5e-23
>prophage 2
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	702088	716818	2718283		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663025.1|702088_703147_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.3	1.5e-20
WP_000197275.1|703441_703984_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|704663_705581_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031797439.1|705670_705772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|705849_707355_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|707695_708196_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|708215_709082_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|709882_710281_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|710243_712349_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|712466_713438_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|713951_714107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|714145_715117_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|715103_716060_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616842.1|716056_716818_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	888430	942434	2718283	bacteriocin,transposase,protease,tRNA	Streptococcus_phage(28.57%)	53	NA	NA
WP_000277738.1|888430_890077_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	98.4	1.0e-289
WP_000448943.1|890420_891410_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|891704_892100_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|892470_893190_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959292.1|893310_894297_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|894344_896153_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|896612_897419_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214070.1|897441_897807_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224612.1|897910_898504_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242102.1|898689_899037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|899053_899689_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|899705_900515_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669934.1|900511_901366_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_111686071.1|901386_902772_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|902781_904626_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|904903_905674_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|905870_906956_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570687.1|907297_908866_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_111686072.1|909010_909769_+	esterase family protein	NA	NA	NA	NA	NA
WP_001836771.1|909962_910472_+	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_001154224.1|910584_911775_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258645.1|911752_912928_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340119.1|913360_914845_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|914825_915086_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049951.1|915085_916648_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
WP_000928413.1|916949_917753_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001795272.1|917971_920296_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000021865.1|920312_921671_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414165.1|921809_923321_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|923807_924377_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|924586_924805_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668818.1|924885_925872_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|926070_926247_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033865.1|926261_926864_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_031763719.1|927778_927880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797239.1|927889_928162_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870827.1|928205_930170_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668627.1|930172_930493_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571167.1|930489_931131_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_001795266.1|931218_931509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001792054.1|931649_931787_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|931875_932232_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|932719_933679_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|933724_933856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|933919_934135_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620949.1|934299_934851_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|934902_935841_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190622.1|936022_937384_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526694.1|937370_939044_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150197.1|939030_939834_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184945.1|939826_940648_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284458.1|940885_941215_-	staphostatin B	NA	NA	NA	NA	NA
WP_001089094.1|941252_942434_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 4
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	962453	970926	2718283		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|962453_962936_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010407.1|962922_964047_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|964050_964755_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|964754_965018_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|965019_965691_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|965683_967873_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|967851_969336_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|969328_970357_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|970359_970926_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	1227268	1243475	2718283	terminase,integrase,head,portal	Staphylococcus_phage(54.17%)	27	1220992:1221009	1247208:1247225
1220992:1221009	attL	ATTCAATCATTAATATAT	NA	NA	NA	NA
WP_001836882.1|1227268_1228396_-|integrase	site-specific integrase	integrase	A0A0C5AN64	Paenibacillus_phage	31.4	6.2e-33
WP_001183750.1|1228448_1229144_-	Ltp family lipoprotein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	50.3	3.6e-07
WP_000554410.1|1229155_1229539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000664917.1|1229685_1230078_-	helix-turn-helix domain-containing protein	NA	A0A2I6PE55	Staphylococcus_phage	53.6	1.6e-28
WP_001209962.1|1230245_1230464_+	DUF739 family protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
WP_000932238.1|1230490_1230766_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000392387.1|1231030_1231201_+	hypothetical protein	NA	Q4ZDZ8	Staphylococcus_virus	89.3	2.4e-21
WP_000800341.1|1231189_1231396_-	hypothetical protein	NA	A1BTY8	Staphylococcus_virus	75.0	3.3e-25
WP_001157025.1|1231456_1232140_+	phage repressor protein	NA	A9CR56	Staphylococcus_phage	85.6	5.2e-107
WP_000072840.1|1232238_1232400_+	DUF1270 family protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
WP_000786993.1|1232486_1232804_+	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	80.6	1.6e-39
WP_000786634.1|1232793_1233060_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.0e-18
WP_001004327.1|1233064_1233601_+	host-nuclease inhibitor Gam family protein	NA	A0A0H3U480	Staphylococcus_phage	82.5	1.7e-76
WP_000907597.1|1233601_1234381_+	ATP-binding protein	NA	A0A1W6JPW0	Staphylococcus_phage	88.0	2.3e-127
WP_000702007.1|1234407_1234956_+	hypothetical protein	NA	A7TWM8	Staphylococcus_phage	92.9	1.1e-91
WP_000929466.1|1234968_1235871_+	DnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	52.0	2.9e-49
WP_000946005.1|1235871_1236162_+	hypothetical protein	NA	A0A223LIA9	Staphylococcus_phage	58.1	7.2e-18
WP_000714410.1|1236176_1236341_+	hypothetical protein	NA	A0A0E3T9L7	Staphylococcus_phage	88.9	1.1e-18
WP_000860979.1|1236340_1236652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000185176.1|1236644_1237175_+	nucleotide pyrophosphohydrolase	NA	A0A1P8VVP1	Streptococcus_phage	38.2	5.2e-22
WP_025174970.1|1237316_1237424_+	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	87.5	3.2e-08
WP_000835355.1|1237420_1237885_+	hypothetical protein	NA	C9E2P0	Enterococcus_phage	43.0	3.2e-20
WP_000653930.1|1238161_1238650_+	hypothetical protein	NA	R9TMH4	Paenibacillus_phage	27.7	4.3e-07
WP_000090969.1|1238802_1239231_+	helix-turn-helix domain-containing protein	NA	A1EAE0	Streptococcus_phage	45.1	1.1e-25
WP_111686085.1|1239217_1240492_+|terminase	PBSX family phage terminase large subunit	terminase	Q4ZE37	Staphylococcus_virus	76.2	2.7e-194
WP_000158568.1|1240504_1241953_+|portal	phage portal protein	portal	Q4ZE36	Staphylococcus_virus	69.4	7.4e-196
WP_001836893.1|1241942_1243475_+|head	phage head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	61.6	1.9e-109
1247208:1247225	attR	ATATATTAATGATTGAAT	NA	NA	NA	NA
>prophage 6
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	1518452	1526782	2718283	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1518452_1519238_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924220.1|1519363_1520254_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001062187.1|1520263_1521610_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683929.1|1521723_1522824_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624583.1|1522826_1523504_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1523634_1524741_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217257.1|1524964_1526782_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
>prophage 7
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	1594355	1603398	2718283	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1594355_1594874_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594991.1|1594895_1597169_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	5.2e-63
WP_000749795.1|1597371_1599651_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1599925_1600186_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_111686097.1|1600204_1601344_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	2.1e-84
WP_001019178.1|1601366_1602392_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1602393_1603398_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	1728661	1792819	2718283	protease,tRNA	Staphylococcus_phage(95.35%)	62	NA	NA
WP_001050538.1|1728661_1735222_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	99.0	1.6e-309
WP_000836465.1|1735547_1735859_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001808015.1|1735880_1738298_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_001025061.1|1738585_1739767_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1739876_1740830_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1740826_1741390_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1741509_1741911_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1742482_1743310_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1743312_1743432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1743543_1744545_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1744666_1745131_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159022.1|1745143_1746325_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493892.1|1746335_1746968_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_001836682.1|1746974_1748018_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	1.6e-195
WP_111686099.1|1748498_1750001_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1750523_1750838_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989122.1|1750837_1752130_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	9.4e-227
WP_001032833.1|1752216_1753071_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1753346_1753571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001153742.1|1754351_1754795_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1754781_1755225_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168901.1|1755520_1756156_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1756595_1757309_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1757568_1757871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1758126_1758492_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623478.1|1758488_1758842_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	100.0	2.6e-22
WP_000453314.1|1759224_1760058_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	100.0	5.4e-159
WP_000366163.1|1760269_1761178_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933822.1|1761302_1762496_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109906.1|1762867_1764460_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001834463.1|1764837_1765584_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672014.1|1765588_1766062_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1766127_1766385_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778525.1|1766381_1767383_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.2e-186
WP_000348374.1|1767387_1768866_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.4	8.1e-283
WP_072433592.1|1769024_1769480_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	97.9	5.7e-78
WP_001795535.1|1769782_1770433_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_000070655.1|1770513_1771509_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	98.8	6.2e-77
WP_000669027.1|1771584_1772211_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	93.8	5.3e-90
WP_000627537.1|1772251_1772593_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
WP_000414214.1|1772693_1773266_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	96.6	1.1e-25
WP_000864143.1|1773462_1774020_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	2.7e-77
WP_000809863.1|1774205_1774391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|1774392_1774569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100228309.1|1774579_1774768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000731418.1|1776119_1776563_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000745473.1|1776562_1777006_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_047210363.1|1777544_1779968_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA	NA
WP_001036003.1|1780091_1780469_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000759947.1|1780674_1781115_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001836790.1|1781159_1782773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000095395.1|1782787_1783087_+	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_047210362.1|1783213_1784458_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	62.1	1.2e-125
WP_000028648.1|1784450_1786007_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	2.6e-287
WP_001791797.1|1786170_1786305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038690.1|1786369_1787089_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_001038757.1|1787239_1787956_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	99.2	2.4e-131
WP_011447030.1|1788057_1788165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038706.1|1788113_1788833_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	5.1e-129
WP_001038872.1|1788953_1789673_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_111686100.1|1789730_1790453_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	4.2e-131
WP_001092776.1|1792249_1792819_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	62.6	2.6e-51
>prophage 9
NZ_LS483310	Staphylococcus aureus strain NCTC9752 chromosome 1	2718283	1886284	1996468	2718283	terminase,protease,tRNA,holin,tail,head,portal,capsid,integrase	Staphylococcus_phage(85.39%)	130	1882777:1882801	1999672:1999696
1882777:1882801	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000170162.1|1886284_1886587_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|1886953_1888492_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831695.1|1888580_1889780_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774565.1|1889792_1891796_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
WP_000992921.1|1891799_1893992_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272070.1|1893988_1894681_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|1894852_1895155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|1895263_1896559_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827750.1|1897418_1898585_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434934.1|1898615_1898942_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669861.1|1899233_1899407_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|1899387_1899990_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_001836816.1|1900260_1901082_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.3	8.8e-69
WP_000284433.1|1901074_1902544_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	3.5e-108
WP_001836814.1|1902727_1903804_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|1903823_1904618_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|1904689_1904797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323164.1|1904807_1906370_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275706.1|1906574_1907672_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.9	2.5e-47
WP_000149686.1|1908043_1908604_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|1908656_1909586_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|1909780_1909954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111686105.1|1910005_1911385_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181322.1|1911504_1912533_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|1912802_1913204_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|1913776_1913950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001836821.1|1914400_1915441_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713070.1|1915497_1916340_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|1916336_1916894_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|1916953_1917478_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|1917598_1918162_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|1918227_1918968_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|1918967_1919840_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645725.1|1919836_1920517_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991303.1|1920517_1921414_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|1921410_1921791_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|1922049_1922226_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|1922468_1922567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068523.1|1922766_1924053_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_111686106.1|1924331_1926380_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669789.1|1927337_1927517_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|1927827_1928088_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702262.1|1928140_1928491_-	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_000920041.1|1929987_1930479_-	staphylokinase	NA	A7TWR8	Staphylococcus_phage	100.0	8.0e-86
WP_000861038.1|1930669_1931425_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|1931436_1931691_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|1931742_1931850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072353918.1|1931902_1932079_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	94.8	5.5e-21
WP_000340977.1|1932221_1932596_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262620.1|1932651_1932939_-	hypothetical protein	NA	C5I682	Staphylococcus_phage	100.0	9.9e-44
WP_001000058.1|1932984_1933137_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_001836550.1|1933129_1936912_-	phage protein	NA	A0A1V0E5H3	Staphylococcus_phage	100.0	0.0e+00
WP_001154317.1|1936927_1938418_-|tail	phage tail family protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
WP_001836551.1|1938417_1943067_-|tail	phage tail tape measure protein	tail	A0A1V0E5H1	Staphylococcus_phage	100.0	0.0e+00
WP_000570353.1|1943122_1943245_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	100.0	6.9e-15
WP_000442601.1|1943304_1943751_-	hypothetical protein	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
WP_000570652.1|1943815_1944769_-	Ig-like domain-containing protein	NA	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
WP_000611452.1|1944769_1945150_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
WP_000501244.1|1945146_1945524_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_000975314.1|1945523_1945859_-|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
WP_001177483.1|1945845_1946178_-|head,tail	phage head-tail connector protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
WP_001252099.1|1946186_1946345_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_000849950.1|1946380_1947628_-|capsid	phage major capsid protein	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
WP_000032525.1|1947715_1948300_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
WP_000511068.1|1948292_1949543_-|portal	phage portal protein	portal	R9QSV8	Staphylococcus_phage	100.0	1.7e-236
WP_001836552.1|1949548_1949749_-	hypothetical protein	NA	R9QT78	Staphylococcus_phage	100.0	7.6e-27
WP_111686107.1|1949762_1951457_-|terminase	terminase	terminase	A0A1V0E5G5	Staphylococcus_phage	99.8	0.0e+00
WP_000919026.1|1951459_1951927_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
WP_000817289.1|1952056_1952401_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	4.2e-65
WP_000406187.1|1952416_1952869_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	R9QTP3	Staphylococcus_phage	100.0	1.8e-79
WP_000282753.1|1952983_1953445_-	hypothetical protein	NA	R9QT84	Staphylococcus_phage	100.0	8.7e-74
WP_000265041.1|1953467_1953668_-	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	100.0	1.1e-28
WP_001005262.1|1953667_1954318_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
WP_000595267.1|1954476_1954626_-	hypothetical protein	NA	R9QSU6	Staphylococcus_phage	100.0	1.8e-17
WP_000195810.1|1954622_1954829_-	DUF1381 domain-containing protein	NA	S4V684	Staphylococcus_phage	100.0	7.6e-30
WP_000185669.1|1954865_1955402_-	dUTP diphosphatase	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
WP_001065083.1|1955394_1955643_-	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
WP_001105621.1|1955635_1955920_-	hypothetical protein	NA	E9LT36	Staphylococcus_phage	100.0	2.7e-46
WP_000982708.1|1955916_1956366_-	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
WP_000693615.1|1956553_1956940_-	hypothetical protein	NA	I1W655	Staphylococcus_phage	100.0	4.1e-69
WP_000131377.1|1956953_1957196_-	hypothetical protein	NA	R9QT89	Staphylococcus_phage	100.0	3.0e-41
WP_000101270.1|1957199_1957568_-	hypothetical protein	NA	A0A0E3XD52	Staphylococcus_phage	100.0	6.7e-53
WP_000401964.1|1957580_1957985_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0E3XBN4	Staphylococcus_phage	100.0	1.4e-72
WP_000338528.1|1957993_1958212_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000148329.1|1958218_1959112_-	DnaD domain-containing protein	NA	A0A0E3TAG7	Staphylococcus_phage	100.0	1.1e-141
WP_000934769.1|1959141_1959612_-	single-stranded DNA-binding protein	NA	A0A0E3T9H6	Staphylococcus_phage	100.0	5.7e-81
WP_072399433.1|1959612_1960182_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	8.4e-87
WP_000138481.1|1960310_1961231_-	recombinase RecT	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
WP_001813910.1|1961232_1963188_-	AAA family ATPase	NA	R9QT82	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|1963184_1963448_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291488.1|1963456_1963717_-	DUF1108 family protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
WP_000066020.1|1963809_1963971_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001815221.1|1963967_1964288_-	DUF771 domain-containing protein	NA	A0A1V0E5D0	Staphylococcus_phage	100.0	1.1e-56
WP_000801108.1|1964346_1964574_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000389906.1|1964575_1964767_-	hypothetical protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
WP_000768245.1|1964816_1965173_+	DUF2513 domain-containing protein	NA	A0A1P8L6H1	Staphylococcus_phage	100.0	6.1e-59
WP_001148859.1|1965167_1965362_-	hypothetical protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
WP_001148565.1|1965377_1966166_-	phage antirepressor KilAC domain-containing protein	NA	R9QSV3	Staphylococcus_phage	100.0	1.2e-144
WP_000639922.1|1966181_1966424_-	DUF739 family protein	NA	R9QSU1	Staphylococcus_phage	100.0	9.5e-40
WP_001083967.1|1966587_1967304_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	100.0	9.2e-131
WP_000804508.1|1967315_1968173_+	restriction endonuclease	NA	R9QTP0	Staphylococcus_phage	100.0	1.2e-161
WP_000705243.1|1968217_1968400_+	hypothetical protein	NA	R9QT81	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|1968435_1968582_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|1968578_1969193_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_000857176.1|1969300_1970338_+|integrase	site-specific integrase	integrase	A7TWL3	Staphylococcus_phage	100.0	3.4e-179
WP_000595401.1|1971456_1972473_-	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
WP_000791404.1|1972494_1973547_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	2.5e-36
WP_111686108.1|1973981_1975205_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000812008.1|1975576_1976422_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000825510.1|1976483_1977395_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001045078.1|1977555_1978863_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000216894.1|1979434_1980061_-	hypothetical protein	NA	C8CH40	Staphylococcus_phage	44.5	7.0e-42
WP_000201397.1|1980057_1980237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001239269.1|1981347_1982283_+	TDT family transporter	NA	NA	NA	NA	NA
WP_172452276.1|1983222_1983387_-	hypothetical protein	NA	U3PG28	Staphylococcus_phage	42.6	2.1e-06
WP_000801979.1|1983564_1984533_-	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
WP_000253083.1|1984961_1985453_-	hypothetical protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	39.9	3.0e-24
WP_031588018.1|1985618_1986677_-|capsid	phage capsid protein	capsid	NA	NA	NA	NA
WP_000884055.1|1986663_1986870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001082128.1|1987094_1987439_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	64.3	1.2e-40
WP_111686110.1|1988109_1990482_-	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	40.9	4.4e-145
WP_001103961.1|1990573_1990873_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	66.7	5.9e-31
WP_000787322.1|1990873_1991098_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	60.3	3.4e-15
WP_000762701.1|1991087_1991237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111686111.1|1991233_1991551_-	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	95.2	2.5e-48
WP_000448766.1|1992209_1992422_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	45.5	7.9e-06
WP_001070981.1|1992575_1993238_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031836414.1|1993250_1994423_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	98.2	4.6e-220
WP_000240645.1|1994491_1996108_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|1996183_1996468_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
1999672:1999696	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
