assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	1	142190-142271	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGG	24	1	3	142214-142247|142214-142247|142214-142247	NZ_LS483314.1_1464766-1464733|NZ_LS483314.1_1245379-1245412|NZ_LS483314.1_1377233-1377266	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|402aa|up_9|NZ_LS483314.1_131335_132541_+,NA|68aa|down_0|NZ_LS483314.1_142334_142538_-	NA|402aa|up_9|NZ_LS483314.1_131335_132541_+	NA	NA|402aa|up_8|NZ_LS483314.1_132541_133747_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|186aa|up_7|NZ_LS483314.1_133757_134315_+	COG2148, WcaJ, Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane]	NA|296aa|up_6|NZ_LS483314.1_134314_135202_+	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs	NA|421aa|up_5|NZ_LS483314.1_135255_136518_+	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|382aa|up_4|NZ_LS483314.1_136594_137740_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|109aa|up_3|NZ_LS483314.1_137804_138131_-	PRK13313, PRK13313, staphylobilin-forming heme oxygenase IsdI	NA|128aa|up_2|NZ_LS483314.1_138137_138521_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|496aa|up_1|NZ_LS483314.1_138947_140435_+	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like	NA|320aa|up_0|NZ_LS483314.1_141081_142041_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|68aa|down_0|NZ_LS483314.1_142334_142538_-	NA	NA|171aa|down_1|NZ_LS483314.1_142716_143229_+	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|247aa|down_2|NZ_LS483314.1_143570_144311_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|325aa|down_3|NZ_LS483314.1_144324_145299_+	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily	NA|254aa|down_4|NZ_LS483314.1_145295_146057_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|344aa|down_5|NZ_LS483314.1_146069_147101_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|120aa|down_6|NZ_LS483314.1_147317_147677_+	COG5609, COG5609, Uncharacterized conserved protein [Function unknown]	NA|342aa|down_7|NZ_LS483314.1_147849_148875_+	PRK07574, PRK07574, NAD-dependent formate dehydrogenase	NA|417aa|down_8|NZ_LS483314.1_149260_150511_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|2392aa|down_9|NZ_LS483314.1_150957_158133_+	PRK12467, PRK12467, peptide synthase; Provisional
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	2	265439-265579	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGGCCCCAACACAAAGAATTTCGAAAAGAAATTCTACAGGTAATGCAAGTTGG	53	1	9	265492-265526|265492-265526|265492-265526|265492-265526|265492-265526|265492-265526|265492-265526|265492-265526|265492-265526	NZ_LS483314.1_848024-847990|NZ_LS483314.1_848080-848046|NZ_LS483314.1_1245458-1245492|NZ_LS483314.1_2295464-2295430|NZ_LS483314.1_2459976-2459942|NZ_LS483314.1_2732248-2732214|NZ_LS483314.1_751619-751653|NZ_LS483314.1_1155900-1155934|NZ_LS483314.1_1159868-1159902	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|45aa|down_1|NZ_LS483314.1_266609_266744_+	NA|563aa|up_9|NZ_LS483314.1_253905_255594_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|574aa|up_8|NZ_LS483314.1_255626_257348_+	pfam18674, TarS_C1, TarS beta-glycosyltransferase C-terminal domain 1	NA|225aa|up_7|NZ_LS483314.1_257491_258166_+	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA	NA|585aa|up_6|NZ_LS483314.1_258410_260165_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|247aa|up_5|NZ_LS483314.1_260167_260908_+	PRK14084, PRK14084, DNA-binding response regulator	NA|148aa|up_4|NZ_LS483314.1_261020_261464_+	PRK04125, PRK04125, antiholin-like protein LrgA	NA|234aa|up_3|NZ_LS483314.1_261456_262158_+	PRK04288, PRK04288, antiholin-like protein LrgB; Provisional	NA|235aa|up_2|NZ_LS483314.1_262265_262970_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|264aa|up_1|NZ_LS483314.1_263118_263910_+	COG2190, NagE, Phosphotransferase system IIA components [Carbohydrate transport and metabolism]	NA|479aa|up_0|NZ_LS483314.1_263925_265362_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|254aa|down_0|NZ_LS483314.1_265829_266591_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|45aa|down_1|NZ_LS483314.1_266609_266744_+	NA	NA|305aa|down_2|NZ_LS483314.1_266841_267756_-	TIGR02152, Putative_ribokinase, ribokinase	NA|135aa|down_3|NZ_LS483314.1_267783_268188_-	PRK11797, PRK11797, D-ribose pyranase; Provisional	NA|294aa|down_4|NZ_LS483314.1_268202_269084_-	pfam06800, Sugar_transport, Sugar transport protein	NA|333aa|down_5|NZ_LS483314.1_269315_270314_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|459aa|down_6|NZ_LS483314.1_270797_272174_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|331aa|down_7|NZ_LS483314.1_272407_273400_+	COG3049, COG3049, Penicillin V acylase and related amidases [Cell envelope biogenesis, outer membrane]	NA|317aa|down_8|NZ_LS483314.1_273725_274676_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|220aa|down_9|NZ_LS483314.1_274727_275387_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	3	689175-689273	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAGAGCCCCTAATTAATAAATTAAAAGGGG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|39aa|up_2|NZ_LS483314.1_687202_687319_+,NA|230aa|down_2|NZ_LS483314.1_691094_691784_-,NA|130aa|down_4|NZ_LS483314.1_692420_692810_+,NA|100aa|down_5|NZ_LS483314.1_692947_693247_+	NA|336aa|up_9|NZ_LS483314.1_678981_679989_+	pfam01384, PHO4, Phosphate transporter family	NA|266aa|up_8|NZ_LS483314.1_680577_681375_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|215aa|up_7|NZ_LS483314.1_681735_682380_+	COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only]	NA|717aa|up_6|NZ_LS483314.1_683076_685227_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|120aa|up_5|NZ_LS483314.1_685372_685732_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|239aa|up_4|NZ_LS483314.1_685921_686638_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|158aa|up_3|NZ_LS483314.1_686637_687111_+	COG3542, COG3542, Uncharacterized conserved protein [Function unknown]	NA|39aa|up_2|NZ_LS483314.1_687202_687319_+	NA	NA|215aa|up_1|NZ_LS483314.1_687463_688108_+	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]	NA|289aa|up_0|NZ_LS483314.1_688223_689090_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|407aa|down_0|NZ_LS483314.1_689290_690511_+	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters	NA|163aa|down_1|NZ_LS483314.1_690507_690996_+	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown]	NA|230aa|down_2|NZ_LS483314.1_691094_691784_-	NA	NA|148aa|down_3|NZ_LS483314.1_691910_692354_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|130aa|down_4|NZ_LS483314.1_692420_692810_+	NA	NA|100aa|down_5|NZ_LS483314.1_692947_693247_+	NA	NA|181aa|down_6|NZ_LS483314.1_693326_693869_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|189aa|down_7|NZ_LS483314.1_693964_694531_-	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|153aa|down_8|NZ_LS483314.1_694532_694991_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|228aa|down_9|NZ_LS483314.1_694993_695677_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	4	742069-742151	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|69aa|up_9|NZ_LS483314.1_728726_728933_+,NA|34aa|down_1|NZ_LS483314.1_743606_743708_+,NA|52aa|down_8|NZ_LS483314.1_751887_752043_+	NA|69aa|up_9|NZ_LS483314.1_728726_728933_+	NA	NA|237aa|up_8|NZ_LS483314.1_729020_729731_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_LS483314.1_729714_730719_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_LS483314.1_731192_733133_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_LS483314.1_733402_735286_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_LS483314.1_735297_737079_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_LS483314.1_737300_738278_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_LS483314.1_738270_739785_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_LS483314.1_740024_741083_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_LS483314.1_741377_741920_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_LS483314.1_742599_743517_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_LS483314.1_743606_743708_+	NA	NA|502aa|down_2|NZ_LS483314.1_743785_745291_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_3|NZ_LS483314.1_745631_746132_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_4|NZ_LS483314.1_746151_747018_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|down_5|NZ_LS483314.1_747818_748217_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_6|NZ_LS483314.1_748179_750285_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_7|NZ_LS483314.1_750402_751374_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|52aa|down_8|NZ_LS483314.1_751887_752043_+	NA	NA|324aa|down_9|NZ_LS483314.1_752081_753053_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	5	847607-847688	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	847631-847664|847631-847664	NZ_LS483314.1_1464733-1464766|NZ_LS483314.1_1245412-1245379	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|194aa|up_9|NZ_LS483314.1_840710_841292_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|206aa|up_8|NZ_LS483314.1_841364_841982_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_7|NZ_LS483314.1_842136_842631_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_6|NZ_LS483314.1_843029_843452_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_5|NZ_LS483314.1_843599_844316_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_4|NZ_LS483314.1_844398_844938_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_3|NZ_LS483314.1_845087_845408_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_2|NZ_LS483314.1_845551_845908_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_1|NZ_LS483314.1_846065_846446_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|293aa|up_0|NZ_LS483314.1_846624_847503_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_LS483314.1_848356_848743_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_LS483314.1_848735_849032_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_LS483314.1_849281_850307_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_LS483314.1_850299_850995_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_LS483314.1_851012_851834_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_5|NZ_LS483314.1_852187_852382_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_6|NZ_LS483314.1_852615_853467_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_7|NZ_LS483314.1_853794_854556_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_8|NZ_LS483314.1_854654_855962_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_9|NZ_LS483314.1_856067_857318_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	6	1159871-1159956	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	10	1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926|1159901-1159926	NZ_LS483314.1_1245491-1245516|NZ_LS483314.1_2732215-2732190|NZ_LS483314.1_751596-751621|NZ_LS483314.1_847991-847966|NZ_LS483314.1_848047-848022|NZ_LS483314.1_848103-848078|NZ_LS483314.1_2732271-2732246|NZ_LS483314.1_751540-751565|NZ_LS483314.1_751652-751677|NZ_LS483314.1_2459999-2459974	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|169aa|up_7|NZ_LS483314.1_1153739_1154246_+,NA|62aa|up_4|NZ_LS483314.1_1156154_1156340_-,NA|78aa|up_3|NZ_LS483314.1_1156961_1157195_-,NA|49aa|up_1|NZ_LS483314.1_1159303_1159450_+,NA|75aa|up_0|NZ_LS483314.1_1159406_1159631_+,NA|76aa|down_5|NZ_LS483314.1_1166930_1167158_+	NA|110aa|up_9|NZ_LS483314.1_1151968_1152298_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|134aa|up_8|NZ_LS483314.1_1152667_1153069_-	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|169aa|up_7|NZ_LS483314.1_1153739_1154246_+	NA	NA|166aa|up_6|NZ_LS483314.1_1154504_1155002_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|117aa|up_5|NZ_LS483314.1_1155152_1155503_+	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|62aa|up_4|NZ_LS483314.1_1156154_1156340_-	NA	NA|78aa|up_3|NZ_LS483314.1_1156961_1157195_-	NA	NA|320aa|up_2|NZ_LS483314.1_1157671_1158631_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|49aa|up_1|NZ_LS483314.1_1159303_1159450_+	NA	NA|75aa|up_0|NZ_LS483314.1_1159406_1159631_+	NA	NA|242aa|down_0|NZ_LS483314.1_1160955_1161681_-	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|242aa|down_1|NZ_LS483314.1_1161775_1162501_-	PRK13043, PRK13043, superantigen-like protein; Reviewed	NA|334aa|down_2|NZ_LS483314.1_1162938_1163940_+	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional	NA|311aa|down_3|NZ_LS483314.1_1163962_1164895_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|519aa|down_4|NZ_LS483314.1_1165066_1166623_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|76aa|down_5|NZ_LS483314.1_1166930_1167158_+	NA	NA|316aa|down_6|NZ_LS483314.1_1167462_1168410_-	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family	NA|63aa|down_7|NZ_LS483314.1_1168658_1168847_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|45aa|down_8|NZ_LS483314.1_1169757_1169892_+	pfam05480, Staph_haemo, Staphylococcus haemolytic protein	NA|45aa|down_9|NZ_LS483314.1_1169948_1170083_+	pfam05480, Staph_haemo, Staphylococcus haemolytic protein
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	7	1768045-1768131	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	ATGCAAGTTGGGGTGGGGCCCCAACATAGA	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|33aa|down_4|NZ_LS483314.1_1772455_1772554_-	NA|423aa|up_9|NZ_LS483314.1_1750447_1751716_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|374aa|up_8|NZ_LS483314.1_1751764_1752886_-	PRK14035, PRK14035, citrate synthase; Provisional	NA|454aa|up_7|NZ_LS483314.1_1753233_1754595_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|586aa|up_6|NZ_LS483314.1_1756919_1758677_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|323aa|up_5|NZ_LS483314.1_1758698_1759667_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|315aa|up_4|NZ_LS483314.1_1759935_1760880_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|286aa|up_3|NZ_LS483314.1_1760879_1761737_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|410aa|up_2|NZ_LS483314.1_1761931_1763161_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|1066aa|up_1|NZ_LS483314.1_1763610_1766808_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|314aa|up_0|NZ_LS483314.1_1766828_1767770_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|433aa|down_0|NZ_LS483314.1_1768221_1769520_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|138aa|down_1|NZ_LS483314.1_1769724_1770138_+	pfam00582, Usp, Universal stress protein family	NA|230aa|down_2|NZ_LS483314.1_1770442_1771132_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|352aa|down_3|NZ_LS483314.1_1771306_1772362_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|33aa|down_4|NZ_LS483314.1_1772455_1772554_-	NA	NA|373aa|down_5|NZ_LS483314.1_1772677_1773796_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|167aa|down_6|NZ_LS483314.1_1773936_1774437_+	pfam00582, Usp, Universal stress protein family	NA|401aa|down_7|NZ_LS483314.1_1774682_1775885_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|316aa|down_8|NZ_LS483314.1_1775972_1776920_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|165aa|down_9|NZ_LS483314.1_1777042_1777537_-	PRK00522, tpx, thiol peroxidase
GCF_900474675.1_40961_F01	NZ_LS483314	Staphylococcus aureus strain NCTC3761 chromosome 1	8	2617661-2617742	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGG	24	1	3	2617685-2617718|2617685-2617718|2617685-2617718	NZ_LS483314.1_1464766-1464733|NZ_LS483314.1_1245379-1245412|NZ_LS483314.1_1377233-1377266	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|163aa|up_9|NZ_LS483314.1_2608073_2608562_-,NA|43aa|up_3|NZ_LS483314.1_2615442_2615571_-,NA|167aa|up_1|NZ_LS483314.1_2616492_2616993_+,NA	NA|163aa|up_9|NZ_LS483314.1_2608073_2608562_-	NA	NA|256aa|up_8|NZ_LS483314.1_2608736_2609504_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|604aa|up_7|NZ_LS483314.1_2609864_2611676_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|163aa|up_6|NZ_LS483314.1_2612187_2612676_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|234aa|up_5|NZ_LS483314.1_2612951_2613653_-	cd13925, RPF, core lysozyme-like domain of resuscitation-promoting factor proteins	NA|352aa|up_4|NZ_LS483314.1_2614260_2615316_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|43aa|up_3|NZ_LS483314.1_2615442_2615571_-	NA	NA|190aa|up_2|NZ_LS483314.1_2615725_2616295_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|167aa|up_1|NZ_LS483314.1_2616492_2616993_+	NA	NA|77aa|up_0|NZ_LS483314.1_2617212_2617443_+	COG4224, COG4224, Uncharacterized protein conserved in bacteria [Function unknown]	NA|126aa|down_0|NZ_LS483314.1_2617846_2618224_-	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]	NA|274aa|down_1|NZ_LS483314.1_2618240_2619062_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|186aa|down_2|NZ_LS483314.1_2619512_2620070_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|235aa|down_3|NZ_LS483314.1_2620062_2620767_+	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs	NA|337aa|down_4|NZ_LS483314.1_2620853_2621864_+	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|277aa|down_5|NZ_LS483314.1_2621883_2622714_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|297aa|down_6|NZ_LS483314.1_2622860_2623751_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|447aa|down_7|NZ_LS483314.1_2623847_2625188_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|369aa|down_8|NZ_LS483314.1_2625181_2626288_-	pfam13738, Pyr_redox_3, Pyridine nucleotide-disulphide oxidoreductase	NA|99aa|down_9|NZ_LS483314.1_2626582_2626879_-	COG4495, COG4495, Uncharacterized protein conserved in bacteria [Function unknown]
