The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	30610	42924	1864452		Synechococcus_phage(28.57%)	8	NA	NA
WP_111703081.1|30610_34336_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.7	8.7e-39
WP_009880323.1|34496_35951_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
WP_111703082.1|35978_37001_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.7	1.4e-63
WP_002986700.1|37168_37723_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	2.4e-25
WP_111703083.1|37906_39454_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	5.7e-45
WP_002987712.1|39512_40637_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_111703084.1|40889_42155_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_002986689.1|42432_42924_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	1.9e-18
>prophage 2
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	331963	378015	1864452	holin,integrase,capsid,head,terminase,tail,portal	Streptococcus_phage(81.63%)	54	334867:334884	373446:373463
WP_111703139.1|331963_332455_+	single-stranded DNA-binding protein	NA	A0A286QNX2	Streptococcus_phage	74.8	1.7e-59
WP_002983142.1|332619_332859_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_111703140.1|332989_333643_-	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_002983147.1|333775_334720_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
334867:334884	attL	TTTTTGTTATAATATAAG	NA	NA	NA	NA
WP_047149517.1|334963_336061_-|integrase	site-specific integrase	integrase	Q938N9	Temperate_phage	94.8	1.7e-197
WP_047149516.1|336236_336788_-	hypothetical protein	NA	A7J267	Streptococcus_phage	92.3	9.0e-86
WP_047149515.1|336798_337182_-	phage protein	NA	A7J268	Streptococcus_phage	98.4	1.5e-68
WP_011184049.1|337195_337546_-	helix-turn-helix transcriptional regulator	NA	M1I9X0	Streptococcus_phage	85.3	1.2e-48
WP_001283052.1|338186_338378_+	hypothetical protein	NA	A7J270	Streptococcus_phage	100.0	7.3e-27
WP_047149514.1|338398_338629_+	hypothetical protein	NA	A7J271	Streptococcus_phage	89.3	6.5e-30
WP_047149513.1|338716_338974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023611037.1|339002_339173_+	hypothetical protein	NA	A7J273	Streptococcus_phage	87.5	2.9e-19
WP_047149512.1|339165_339369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047149511.1|339365_339752_+	hypothetical protein	NA	A7J274	Streptococcus_phage	86.6	4.0e-56
WP_030127426.1|339897_340101_+	hypothetical protein	NA	A7J276	Streptococcus_phage	89.6	3.7e-29
WP_030127427.1|340188_340488_+	hypothetical protein	NA	A7J277	Streptococcus_phage	96.0	3.7e-41
WP_011888943.1|340487_341645_+	DUF2800 domain-containing protein	NA	A7J278	Streptococcus_phage	98.2	1.0e-216
WP_086934854.1|341653_342217_+	DUF2815 family protein	NA	D2J040	Enterococcus_phage	58.5	3.3e-51
WP_047149510.1|342259_344182_+	DNA polymerase	NA	A7J280	Streptococcus_phage	99.1	0.0e+00
WP_111689469.1|344186_346571_+	DNA primase	NA	A7J282	Streptococcus_phage	94.4	3.1e-276
WP_011054885.1|346956_347232_+	VRR-NUC domain-containing protein	NA	A7J283	Streptococcus_phage	96.7	2.9e-45
WP_047149508.1|347228_348551_+	DEAD/DEAH box helicase family protein	NA	A7J284	Streptococcus_phage	96.8	1.1e-249
WP_011054883.1|348551_348722_+	hypothetical protein	NA	A7J285	Streptococcus_phage	94.2	3.1e-21
WP_011054882.1|348714_348987_+	hypothetical protein	NA	A7J287	Streptococcus_phage	73.3	5.7e-25
WP_011054881.1|349119_349536_+	transcriptional regulator	NA	A7J289	Streptococcus_phage	99.3	3.3e-72
WP_011106637.1|349625_350078_+|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	100.0	6.9e-76
WP_011054879.1|350067_351345_+|terminase	PBSX family phage terminase large subunit	terminase	A7J291	Streptococcus_phage	100.0	1.1e-246
WP_038433243.1|351360_352893_+|portal	phage portal protein	portal	A7J292	Streptococcus_phage	99.8	4.5e-292
WP_032465703.1|352852_354301_+|capsid	minor capsid protein	capsid	A7J293	Streptococcus_phage	99.8	1.2e-278
WP_011054876.1|354328_354517_+	hypothetical protein	NA	A7J294	Streptococcus_phage	100.0	7.4e-24
WP_011888934.1|354521_354788_+	hypothetical protein	NA	Q938K9	Temperate_phage	96.6	2.9e-37
WP_011888933.1|354949_355519_+	DUF4355 domain-containing protein	NA	A7J296	Streptococcus_phage	100.0	1.9e-83
WP_002983429.1|355531_356419_+	hypothetical protein	NA	A7J297	Streptococcus_phage	100.0	2.1e-161
WP_011888932.1|356430_356787_+|head,tail	phage head-tail connector protein	head,tail	A7J298	Streptococcus_phage	99.2	7.9e-59
WP_011054872.1|356797_357076_+	hypothetical protein	NA	A7J299	Streptococcus_phage	100.0	1.9e-47
WP_011106640.1|357072_357417_+	HK97 gp10 family phage protein	NA	A7J2A0	Streptococcus_phage	98.2	5.1e-55
WP_011054870.1|357420_357780_+	hypothetical protein	NA	A7J2A1	Streptococcus_phage	98.3	1.2e-57
WP_011054869.1|357791_358391_+|tail	phage major tail protein, TP901-1 family	tail	A7J2A2	Streptococcus_phage	97.1	1.7e-90
WP_011888931.1|358444_358900_+	hypothetical protein	NA	A7J2A3	Streptococcus_phage	99.3	5.3e-76
WP_011888930.1|358974_359208_+	hypothetical protein	NA	A7J2A4	Streptococcus_phage	98.7	1.3e-33
WP_111688404.1|359222_363605_+	tape measure protein	NA	A7J2A5	Streptococcus_phage	74.2	1.2e-225
WP_011054865.1|363616_364459_+	hypothetical protein	NA	A7J2A6	Streptococcus_phage	97.9	8.8e-157
WP_011888928.1|364468_366448_+|tail	phage tail protein	tail	A7J2A7	Streptococcus_phage	92.8	0.0e+00
WP_011888927.1|366444_367560_+	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	74.9	1.6e-142
WP_011017395.1|367574_369479_+	gp58-like family protein	NA	Q938J9	Temperate_phage	83.7	1.1e-210
WP_002988448.1|369490_369919_+	DUF1617 family protein	NA	Q938J8	Temperate_phage	84.3	8.1e-58
WP_046735270.1|369921_370560_+	hypothetical protein	NA	A3F662	Streptococcus_phage	52.7	2.0e-44
WP_011017397.1|370571_370844_+	hypothetical protein	NA	A7J2B2	Streptococcus_phage	91.0	5.5e-36
WP_029714020.1|370840_371068_+|holin	phage holin	holin	A7J2B3	Streptococcus_phage	97.3	2.2e-30
WP_047149505.1|371190_372396_+	glucosaminidase domain-containing protein	NA	A7J2B5	Streptococcus_phage	82.8	1.5e-202
WP_047149504.1|373092_373275_+	hypothetical protein	NA	A3F673	Streptococcus_phage	73.3	1.7e-17
WP_011054967.1|373501_376330_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	55.7	1.0e-305
373446:373463	attR	TTTTTGTTATAATATAAG	NA	NA	NA	NA
WP_032460474.1|376445_377519_+	aminopeptidase P family protein	NA	A0A0P0I8D7	Acinetobacter_phage	32.2	1.3e-16
WP_002988493.1|377553_378015_+	hypothetical protein	NA	F8WPT6	Bacillus_phage	55.1	1.1e-33
>prophage 3
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	539056	598405	1864452	holin,integrase,capsid,terminase,tail,tRNA,portal	Streptococcus_pyogenes_phage(56.45%)	72	548178:548193	607459:607474
WP_032460195.1|539056_539992_+|tRNA	methionyl-tRNA formyltransferase	tRNA	M4QRX9	Synechococcus_phage	38.5	6.0e-05
WP_014407741.1|539981_541304_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_002983660.1|541341_542082_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_012560855.1|542078_543977_+	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	B5LWE2	Feldmannia_species_virus	30.7	1.4e-21
WP_011054833.1|544099_544792_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_002991890.1|544788_545793_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002983671.1|545785_546427_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023079249.1|546463_547864_+	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	43.5	5.4e-26
WP_002991882.1|547863_548241_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
548178:548193	attL	TCAGTGGATTGAAGAA	NA	NA	NA	NA
WP_011888673.1|548258_549200_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	77.2	1.7e-129
WP_111703176.1|549327_549960_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	54.3	5.5e-63
WP_111703177.1|550015_551341_+	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	51.1	5.3e-116
WP_002983685.1|551312_551978_+	ComF family protein	NA	NA	NA	NA	NA
WP_002988974.1|552057_552606_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_002983693.1|560378_560912_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_038434191.1|560991_561768_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_009880742.1|561915_563082_-|integrase	tyrosine-type recombinase/integrase	integrase	C5J953	Streptococcus_phage	42.2	7.0e-80
WP_043885029.1|563255_563942_-	hypothetical protein	NA	A0A1P8VVT3	Streptococcus_phage	99.1	4.8e-121
WP_011054825.1|564112_564265_-	hypothetical protein	NA	A0A1P8VVQ0	Streptococcus_phage	100.0	5.2e-20
WP_011054824.1|564275_564653_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1P8VVK5	Streptococcus_phage	100.0	4.0e-69
WP_011528540.1|564636_564996_-	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN3	Streptococcus_phage	98.3	1.8e-58
WP_009881062.1|565184_565403_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVR5	Streptococcus_phage	100.0	4.1e-34
WP_011528542.1|565497_565749_+	hypothetical protein	NA	A0A1P8VVV6	Streptococcus_phage	100.0	2.8e-42
WP_111703179.1|565929_566247_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN6	Streptococcus_phage	72.4	1.2e-34
WP_085613680.1|566260_567163_+	phage replisome organizer N-terminal domain-containing protein	NA	J7KBV5	Streptococcus_phage	87.5	3.0e-118
WP_063629027.1|567172_568015_+	ATP-binding protein	NA	A0A1S5S7L9	Streptococcus_phage	40.7	1.3e-48
WP_111703180.1|568164_568518_+	hypothetical protein	NA	A0A097PAU3	Streptococcus_pyogenes_phage	53.1	1.8e-15
WP_111703181.1|568498_568753_+	hypothetical protein	NA	Q938N0	Temperate_phage	97.6	4.1e-41
WP_011285577.1|568774_569257_+	siphovirus Gp157 family protein	NA	Q938M9	Temperate_phage	99.4	4.1e-50
WP_111703182.1|569257_569932_+	ERF family protein	NA	Q938M8	Temperate_phage	94.6	2.8e-105
WP_038433322.1|569924_570416_+	single-stranded DNA-binding protein	NA	A0A286QNX2	Streptococcus_phage	74.8	5.8e-60
WP_011106686.1|570421_570625_+	hypothetical protein	NA	Q938M6	Temperate_phage	100.0	4.7e-32
WP_111703183.1|570624_571065_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A097PAS0	Streptococcus_pyogenes_phage	97.9	1.3e-79
WP_011018138.1|571061_571418_+	hypothetical protein	NA	A0A1P8VVP9	Streptococcus_phage	100.0	5.0e-61
WP_111703184.1|571878_572292_+	hypothetical protein	NA	Q938M1	Temperate_phage	66.7	1.2e-37
WP_111703185.1|572288_572573_+	hypothetical protein	NA	A3F628	Streptococcus_phage	79.8	5.9e-33
WP_111703186.1|572576_573062_+	class I SAM-dependent methyltransferase	NA	A0A097PAU8	Streptococcus_pyogenes_phage	98.8	1.4e-93
WP_021340166.1|573065_573293_+	hypothetical protein	NA	A3F630	Streptococcus_phage	76.0	1.9e-26
WP_011054812.1|573317_573503_+	hypothetical protein	NA	A0A097PBF0	Streptococcus_pyogenes_phage	100.0	7.0e-27
WP_032461639.1|573499_573793_+	hypothetical protein	NA	A0A097PAR1	Streptococcus_pyogenes_phage	100.0	4.2e-50
WP_032461638.1|573789_574293_+	DUF1642 domain-containing protein	NA	A0A097PAV5	Streptococcus_pyogenes_phage	99.4	1.5e-92
WP_002987493.1|574289_574460_+	hypothetical protein	NA	A0A097PAS8	Streptococcus_pyogenes_phage	100.0	2.9e-27
WP_032461637.1|574733_575168_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	94.4	2.2e-71
WP_011285571.1|575516_575897_+	hypothetical protein	NA	A0A097PAR5	Streptococcus_pyogenes_phage	100.0	1.0e-64
WP_009880266.1|575886_577161_+|terminase	PBSX family phage terminase large subunit	terminase	A0A097PAV9	Streptococcus_pyogenes_phage	100.0	1.1e-251
WP_009880265.1|577160_578486_+|portal	phage portal protein	portal	A0A097PAT2	Streptococcus_pyogenes_phage	100.0	7.4e-243
WP_009880264.1|578454_579363_+|capsid	minor capsid protein	capsid	A0A097PBF2	Streptococcus_pyogenes_phage	100.0	4.2e-88
WP_011054805.1|579369_579636_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	100.0	2.6e-38
WP_009880262.1|579785_580355_+	DUF4355 domain-containing protein	NA	A0A097PAW3	Streptococcus_pyogenes_phage	98.4	8.5e-71
WP_009880261.1|580372_581263_+	hypothetical protein	NA	A0A097PAW2	Streptococcus_pyogenes_phage	99.4	8.6e-86
WP_009880260.1|581274_581568_+	Rho termination factor N-terminal domain-containing protein	NA	A0A097PBF3	Streptococcus_pyogenes_phage	100.0	2.0e-47
WP_009880259.1|581581_581926_+	hypothetical protein	NA	A0A097PAS2	Streptococcus_pyogenes_phage	100.0	1.1e-54
WP_009880258.1|581922_582234_+	hypothetical protein	NA	A0A097PAW7	Streptococcus_pyogenes_phage	99.0	2.6e-50
WP_009880257.1|582230_582626_+	hypothetical protein	NA	A0A097PAT9	Streptococcus_pyogenes_phage	100.0	1.8e-59
WP_009880256.1|582627_583038_+	DUF5072 family protein	NA	A0A097PAW5	Streptococcus_pyogenes_phage	100.0	1.4e-70
WP_009880255.1|583049_583556_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	100.0	2.6e-79
WP_009880254.1|583568_583886_+	hypothetical protein	NA	A0A097PAS6	Streptococcus_pyogenes_phage	100.0	4.9e-52
WP_009880253.1|583858_584317_+	hypothetical protein	NA	A0A097PAX1	Streptococcus_pyogenes_phage	100.0	2.3e-82
WP_011054802.1|584309_586115_+|tail	tail protein	tail	A0A097PAU2	Streptococcus_pyogenes_phage	99.7	8.8e-263
WP_009880250.1|586115_587600_+|tail	phage tail family protein	tail	A0A097PAW9	Streptococcus_pyogenes_phage	99.8	4.3e-292
WP_011054801.1|587600_591041_+|tail	phage tail protein	tail	A0A097PBF5	Streptococcus_pyogenes_phage	99.9	0.0e+00
WP_009880248.1|591045_592908_+	hypothetical protein	NA	A0A097PAT0	Streptococcus_pyogenes_phage	99.7	0.0e+00
WP_009880247.1|592918_593266_+	DUF1366 domain-containing protein	NA	A0A097PAX5	Streptococcus_pyogenes_phage	100.0	3.5e-59
WP_015055952.1|593415_593739_+	hypothetical protein	NA	A0A097PAX2	Streptococcus_pyogenes_phage	100.0	7.7e-53
WP_011054798.1|593738_594071_+|holin	phage holin	holin	A0A097PBF6	Streptococcus_pyogenes_phage	100.0	5.7e-51
WP_011054797.1|594072_594837_+	CHAP domain-containing protein	NA	A0A097PAT3	Streptococcus_pyogenes_phage	100.0	1.5e-150
WP_011054796.1|594848_595451_+	hypothetical protein	NA	A0A097PAX9	Streptococcus_pyogenes_phage	98.8	7.8e-91
WP_011054795.1|595461_596235_+	hypothetical protein	NA	A0A097PAV0	Streptococcus_pyogenes_phage	100.0	3.9e-135
WP_009880241.1|596244_596466_+	hypothetical protein	NA	A0A097PAX7	Streptococcus_pyogenes_phage	84.5	2.5e-18
WP_009880240.1|596465_597125_+	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	100.0	8.5e-123
WP_009880239.1|597246_598002_-	streptococcal pyrogenic exotoxin SpeA	NA	A0A097PAT7	Streptococcus_pyogenes_phage	100.0	2.2e-143
WP_111703187.1|598222_598405_+	Paratox	NA	J7KIW4	Streptococcus_phage	81.4	1.2e-18
607459:607474	attR	TCAGTGGATTGAAGAA	NA	NA	NA	NA
>prophage 4
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	699454	739516	1864452	holin,integrase,capsid,terminase,tail,portal	Streptococcus_phage(70.0%)	59	702063:702082	737293:737312
WP_172449955.1|699454_700306_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.7	5.4e-13
WP_002992620.1|700298_701141_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002989129.1|701118_701706_+	YpmS family protein	NA	NA	NA	NA	NA
WP_002983920.1|701804_702080_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.0	2.6e-25
702063:702082	attL	AAAGACGCTGTTAAATAATT	NA	NA	NA	NA
WP_003051793.1|702168_703311_-|integrase	site-specific integrase	integrase	M1NRJ9	Streptococcus_phage	77.4	2.4e-173
WP_010922481.1|703434_703953_-	restriction endonuclease	NA	E8ZDN5	Streptococcus_phage	45.9	9.2e-32
WP_010922480.1|703964_704720_-	helix-turn-helix transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	60.8	2.8e-77
WP_010922479.1|704921_705134_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I583	Streptococcus_phage	56.7	1.1e-10
WP_010922478.1|705403_705715_+	excisionase	NA	A0A1S5SA25	Streptococcus_phage	77.7	5.3e-43
WP_010922477.1|705716_705902_+	hypothetical protein	NA	Q938N3	Temperate_phage	83.6	1.3e-20
WP_011017564.1|706390_706777_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	51.9	8.1e-25
WP_010922205.1|706757_706991_+	hypothetical protein	NA	Q938N1	Temperate_phage	96.1	2.8e-36
WP_002988354.1|706987_707128_+	hypothetical protein	NA	A0A1X9I6Y1	Streptococcus_phage	54.5	3.4e-05
WP_002988357.1|707136_707343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011528796.1|707398_707728_+	hypothetical protein	NA	J7KGX3	Streptococcus_phage	84.4	7.1e-46
WP_011054700.1|707730_708657_+	recombinase RecT	NA	M1NRN6	Streptococcus_phage	71.8	1.2e-90
WP_000594115.1|708653_708854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054699.1|708846_709644_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	J7KGZ1	Streptococcus_phage	83.8	1.3e-130
WP_011054698.1|710008_710404_+	hypothetical protein	NA	A8ATL9	Listeria_phage	52.3	1.4e-19
WP_011054697.1|710400_711747_+	PcfJ domain-containing protein	NA	A8ATM0	Listeria_phage	49.4	1.0e-122
WP_011184741.1|711757_712090_+	hypothetical protein	NA	M1NS23	Streptococcus_phage	67.0	8.8e-36
WP_011054695.1|712086_712599_+	hypothetical protein	NA	M1PFM2	Streptococcus_phage	85.9	1.7e-78
WP_011054694.1|712634_712952_+	DUF1372 family protein	NA	A1EAD7	Streptococcus_phage	71.4	9.0e-30
WP_011054693.1|712948_713104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054692.1|713100_713352_+	hypothetical protein	NA	M1PF60	Streptococcus_phage	59.0	1.6e-18
WP_011528791.1|713427_713847_+	DUF1492 domain-containing protein	NA	A0A1X9I5B5	Streptococcus_phage	79.9	6.7e-57
WP_011054690.1|713954_714299_+	HNH endonuclease	NA	M1Q0W7	Streptococcus_phage	69.4	3.2e-41
WP_002994106.1|714446_714803_+	hypothetical protein	NA	M1PRL3	Streptococcus_phage	57.8	2.4e-07
WP_111703209.1|714799_716068_+|portal	phage portal protein	portal	M1PFL4	Streptococcus_phage	75.4	1.4e-187
WP_010922467.1|716060_717554_+	hypothetical protein	NA	M1Q184	Streptococcus_phage	55.0	2.0e-87
WP_002994100.1|717559_717784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054687.1|717860_718013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002986828.1|718005_718272_+	hypothetical protein	NA	Q938K9	Temperate_phage	95.5	6.4e-37
WP_011106704.1|718273_718489_+	hypothetical protein	NA	M1IRA5	Streptococcus_phage	72.4	4.1e-26
WP_011054685.1|718570_719986_+|terminase	terminase	terminase	A0A0B5A091	Streptococcus_phage	74.0	1.5e-212
WP_010922462.1|720066_720528_+	DUF4355 domain-containing protein	NA	M1Q1L0	Streptococcus_phage	53.2	4.5e-38
WP_011054683.1|720552_721464_+|capsid	phage major capsid protein	capsid	M1PFL0	Streptococcus_phage	67.0	2.9e-113
WP_010922460.1|721463_721664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054682.1|721673_722096_+	hypothetical protein	NA	A0A0B5A2F6	Streptococcus_phage	67.2	8.2e-47
WP_011054681.1|722055_722394_+	hypothetical protein	NA	A0A0B5A086	Streptococcus_phage	75.0	8.1e-45
WP_000032787.1|722386_722623_+	hypothetical protein	NA	A0A1P8BMT2	Lactococcus_phage	66.7	2.5e-21
WP_000573598.1|722623_722959_+	hypothetical protein	NA	A0A1P8BMR5	Lactococcus_phage	64.9	9.8e-35
WP_011054679.1|722974_723565_+	hypothetical protein	NA	M1PKG8	Streptococcus_phage	62.5	1.1e-60
WP_010922455.1|723575_723839_+	hypothetical protein	NA	A0A0B5A2F3	Streptococcus_phage	55.8	1.0e-18
WP_011054678.1|723853_724225_+	DUF5361 domain-containing protein	NA	M1PL84	Streptococcus_phage	62.4	1.7e-35
WP_111703210.1|724224_726588_+	hypothetical protein	NA	M1NRG5	Streptococcus_phage	49.9	2.5e-132
WP_002992579.1|726584_727280_+	hypothetical protein	NA	A0A1B1P761	Bacillus_phage	32.2	4.7e-07
WP_168388764.1|727261_729235_+|tail	phage tail protein	tail	M1PKG3	Streptococcus_phage	49.6	2.0e-98
WP_111703211.1|729234_730344_+	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	67.8	1.3e-115
WP_111703212.1|730358_732140_+	hypothetical protein	NA	Q938J9	Temperate_phage	40.1	3.7e-64
WP_011528780.1|732148_732577_+	DUF1617 family protein	NA	Q938J8	Temperate_phage	87.9	3.7e-63
WP_011528779.1|732579_733212_+	hypothetical protein	NA	Q938J7	Temperate_phage	50.5	4.0e-45
WP_011017397.1|733223_733496_+	hypothetical protein	NA	A7J2B2	Streptococcus_phage	91.0	5.5e-36
WP_111703213.1|733492_733720_+|holin	phage holin	holin	A7J2B3	Streptococcus_phage	98.7	7.6e-31
WP_014635574.1|733838_735056_+	glucosaminidase domain-containing protein	NA	A0A1P8VVM5	Streptococcus_phage	60.1	1.1e-163
WP_002985327.1|735124_735832_-	streptococcal pyrogenic exotoxin SpeC	NA	A0A097PAT7	Streptococcus_pyogenes_phage	27.1	3.9e-09
WP_014635573.1|735942_736701_-	DNase Mf2	NA	NA	NA	NA	NA
WP_014635572.1|736940_737123_+	hypothetical protein	NA	A3F673	Streptococcus_phage	80.0	1.7e-20
WP_111703214.1|737653_739516_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	33.8	3.2e-90
737293:737312	attR	AAAGACGCTGTTAAATAATT	NA	NA	NA	NA
>prophage 5
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	1209664	1220267	1864452		Streptococcus_phage(57.14%)	9	NA	NA
WP_111703355.1|1209664_1210807_-	cysteine desulfurase	NA	H7BUW1	unidentified_phage	31.7	7.8e-15
WP_111703357.1|1211041_1211482_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111703359.1|1211511_1212780_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_111703361.1|1212867_1214220_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	3.5e-30
WP_011054350.1|1214440_1214782_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	39.3	1.3e-18
WP_002990262.1|1214842_1216009_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_002985140.1|1216102_1216789_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002985142.1|1216785_1217949_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_011054348.1|1218056_1220267_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
>prophage 6
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	1437885	1486244	1864452	bacteriocin,transposase	Klebsiella_phage(10.0%)	49	NA	NA
WP_042361478.1|1437885_1439019_-|transposase	ISAs1-like element IS1548 family transposase	transposase	NA	NA	NA	NA
WP_111703453.1|1439140_1440643_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	41.1	1.3e-73
WP_111703754.1|1440832_1441426_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_111703455.1|1441422_1442250_-	DNA-formamidopyrimidine glycosylase	NA	A0A1V0CNR6	Kaumoebavirus	28.2	1.6e-14
WP_111703457.1|1442428_1443295_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_128650799.1|1443383_1443452_+	peptide pheromone SHP2	NA	NA	NA	NA	NA
WP_023605037.1|1444355_1444625_+	quorum-sensing system protein StcA	NA	NA	NA	NA	NA
WP_009880375.1|1444972_1445371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032466306.1|1446784_1447186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111703458.1|1447379_1447661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111703460.1|1447710_1447905_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003060803.1|1448198_1448399_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_111703462.1|1448411_1448639_-|bacteriocin	bacteriocin BlpM	bacteriocin	NA	NA	NA	NA
WP_002987564.1|1449861_1450044_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_002985741.1|1451248_1451725_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002985743.1|1451745_1452642_-	GTPase Era	NA	NA	NA	NA	NA
WP_002985746.1|1452761_1453169_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_111703464.1|1453149_1453647_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_111703466.1|1453805_1454381_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
WP_010921967.1|1454426_1455479_-	PhoH family protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
WP_111703468.1|1455637_1457410_-	oleate hydratase	NA	NA	NA	NA	NA
WP_111703470.1|1457723_1458905_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XB61	Gordonia_phage	40.5	5.6e-16
WP_002985757.1|1459060_1459276_-	YozE family protein	NA	NA	NA	NA	NA
WP_111703472.1|1459272_1459782_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_011106872.1|1459854_1460712_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002985763.1|1460820_1461378_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002985765.1|1461407_1462136_-	UMP kinase	NA	NA	NA	NA	NA
WP_002985768.1|1462458_1463148_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002990800.1|1463253_1463679_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_030126115.1|1463922_1464276_+	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_014635327.1|1464345_1466751_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
WP_002990808.1|1466967_1467774_+	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
WP_111703474.1|1467921_1468776_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002985780.1|1468776_1469502_-	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.4e-17
WP_011017446.1|1469565_1470498_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014635325.1|1470643_1471291_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_011184241.1|1471389_1471731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111703476.1|1471884_1472580_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_111703478.1|1472599_1472851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111703480.1|1472850_1473405_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_011889106.1|1473438_1474821_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L4K9	Tupanvirus	36.4	3.8e-32
WP_111703482.1|1474993_1476331_-	MFS transporter	NA	NA	NA	NA	NA
WP_111703484.1|1476663_1477623_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_111703486.1|1477698_1478397_-	3-oxoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.6	3.2e-11
WP_002990844.1|1478389_1478626_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_111703488.1|1479349_1480318_+	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	52.6	9.0e-89
WP_111703490.1|1480829_1481534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111703491.1|1484119_1484518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111703493.1|1485950_1486244_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	1509046	1514920	1864452		Streptococcus_phage(100.0%)	8	NA	NA
WP_047235166.1|1509046_1509874_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.1	1.4e-127
WP_002990897.1|1509947_1510304_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.0	1.1e-39
WP_111703512.1|1510603_1511233_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002985833.1|1511279_1511672_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002985836.1|1511698_1512562_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
WP_011054221.1|1512566_1512890_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	62.3	1.0e-28
WP_011528291.1|1513391_1514267_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.9	1.8e-72
WP_010921930.1|1514284_1514920_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
>prophage 8
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	1663881	1671959	1864452	transposase	Staphylococcus_phage(33.33%)	8	NA	NA
WP_009880696.1|1663881_1664172_-	helix-turn-helix domain-containing protein	NA	A0A0N7GFG6	Staphylococcus_phage	56.0	3.7e-22
WP_172449975.1|1664226_1665578_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	49.8	3.7e-64
WP_012561030.1|1665695_1666010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111703608.1|1666398_1666635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111703610.1|1667026_1668784_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	28.0	2.7e-35
WP_111703612.1|1668816_1669383_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.4	1.3e-31
WP_111703614.1|1669415_1670684_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	47.1	4.5e-96
WP_111703616.1|1671275_1671959_+	exotoxin	NA	A0EX09	Staphylococcus_phage	35.4	7.9e-15
>prophage 9
NZ_LS483330	Streptococcus pyogenes strain NCTC8328 chromosome 1	1864452	1781234	1801505	1864452	holin,integrase	Streptococcus_phage(46.67%)	25	1784433:1784453	1798806:1798826
WP_111703699.1|1781234_1782455_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	24.3	7.8e-05
WP_111703701.1|1782465_1784448_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	3.0e-62
1784433:1784453	attL	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
WP_111703703.1|1784542_1785688_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	45.4	1.9e-85
WP_011185066.1|1785942_1786086_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_003058809.1|1786946_1787714_-	helix-turn-helix domain-containing protein	NA	Q76TK4	Streptococcus_pyogenes_phage	83.1	3.6e-72
WP_002992503.1|1787867_1788074_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	2.4e-07
WP_080277853.1|1788107_1788875_+	hypothetical protein	NA	A0A0A7S0G2	Clostridium_phage	53.7	5.0e-26
WP_065355060.1|1788884_1789508_+	antirepressor	NA	A0A1W6JPC3	Staphylococcus_phage	43.3	1.7e-40
WP_000648623.1|1789534_1789777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000132665.1|1790035_1790209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000074663.1|1790426_1790600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285276.1|1791221_1791554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021340709.1|1791553_1791745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003058810.1|1791756_1792086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922766.1|1792088_1792361_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	3.6e-19
WP_011285278.1|1792361_1793228_+	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	73.8	6.1e-121
WP_011285279.1|1793239_1794634_+	phage protein	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
WP_011285280.1|1794927_1795182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285281.1|1795178_1795352_+	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	8.6e-11
WP_014635784.1|1795357_1795531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014407945.1|1795532_1796042_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.1e-29
WP_002992480.1|1796116_1796605_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
WP_020905578.1|1797008_1797371_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_014407948.1|1797345_1797729_+	DUF1492 domain-containing protein	NA	Q938L8	Temperate_phage	40.2	6.4e-14
WP_111703705.1|1798949_1801505_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	23.2	3.0e-43
1798806:1798826	attR	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
