The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	36470	48535	2063270		Microbacterium_phage(14.29%)	8	NA	NA
WP_001042263.1|36470_40196_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	1.6e-40
WP_000220672.1|40429_41884_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	6.3e-54
WP_001291325.1|41911_42934_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.6	9.6e-65
WP_000685111.1|43101_43653_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
WP_000780020.1|43672_44425_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000166558.1|44444_45992_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	2.5e-77
WP_001045908.1|46184_47084_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783424.1|47230_48535_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
>prophage 2
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	122754	175933	2063270	tRNA,transposase,integrase	Streptococcus_phage(33.33%)	59	113409:113424	176976:176991
113409:113424	attL	AAAATGCATTGAATTT	NA	NA	NA	NA
WP_000160598.1|122754_123921_-|transposase	IS30-like element ISSag9 family transposase	transposase	NA	NA	NA	NA
WP_001284503.1|124206_125661_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000668253.1|125700_126669_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000794185.1|126721_127663_-	ribose ABC transporter permease	NA	NA	NA	NA	NA
WP_000687224.1|127664_129143_-	sugar ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.3	8.0e-12
WP_000750740.1|129158_129557_-	D-ribose pyranase	NA	NA	NA	NA	NA
WP_000065857.1|129531_130443_-	ribokinase	NA	NA	NA	NA	NA
WP_000104359.1|130435_131422_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000017573.1|131603_132692_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001274148.1|132691_133378_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	4.5e-34
WP_000590687.1|133408_134080_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.8	5.3e-40
WP_001878564.1|134063_135143_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	33.1	3.5e-41
WP_000514048.1|135296_136487_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_000164574.1|136505_137894_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_001018987.1|138034_138916_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_000197055.1|139000_139918_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_001140949.1|140156_140345_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_000216447.1|140476_140842_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_000036701.1|140841_142506_+	DAK2 domain-containing protein	NA	NA	NA	NA	NA
WP_000052520.1|142653_143538_+	SPFH domain-containing protein	NA	A0A1V0SL90	Klosneuvirus	35.4	9.5e-37
WP_000818733.1|143629_143746_-	putative metal homeostasis protein	NA	NA	NA	NA	NA
WP_001871253.1|143938_144961_+|transposase	IS30-like element ISSag3 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	32.7	7.1e-36
WP_109813542.1|145317_145482_+	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	81.1	3.8e-08
WP_000477139.1|145611_149016_-	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA	NA
WP_000241942.1|149095_149623_-	isoprenylcysteine carboxyl methyltransferase family protein	NA	NA	NA	NA	NA
WP_000594680.1|149731_151072_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_001024192.1|151068_151722_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_088181596.1|151925_152731_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_000589235.1|153021_153630_-	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000827865.1|153616_153952_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000234841.1|154480_154969_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000838140.1|155137_155899_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000644459.1|155895_156798_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.8	3.3e-29
WP_088181596.1|156840_157645_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_025193275.1|157845_158238_+	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_001204138.1|158416_159271_+	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	36.8	1.9e-29
WP_000470462.1|159949_160567_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_000901040.1|160570_161293_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000731464.1|161446_161848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000108715.1|162558_162753_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_001266200.1|163047_163356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001043246.1|163431_163776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000731522.1|164055_164439_-	DUF1310 family protein	NA	NA	NA	NA	NA
WP_000731527.1|164704_165079_-	DUF1310 family protein	NA	NA	NA	NA	NA
WP_000078286.1|165179_165470_-	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_000134166.1|166087_166414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000792760.1|167472_167805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000622523.1|167806_168379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000731526.1|168485_168872_+	DUF1310 family protein	NA	NA	NA	NA	NA
WP_001870649.1|168868_169147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001933101.1|169140_169623_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000844742.1|169754_170345_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_000241025.1|170415_171366_+	WYL domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	30.3	1.1e-06
WP_000141654.1|171652_172147_-	helix-turn-helix transcriptional regulator	NA	U6E975	Streptococcus_phage	43.5	2.8e-06
WP_000947485.1|172603_172777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000256345.1|173102_173522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000483438.1|173524_174553_+	replication initiation factor domain-containing protein	NA	NA	NA	NA	NA
WP_000184043.1|174613_174799_+	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
WP_001262282.1|174802_175933_+|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	30.1	2.1e-41
176976:176991	attR	AAAATGCATTGAATTT	NA	NA	NA	NA
>prophage 3
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	526495	538013	2063270	transposase	Streptococcus_phage(90.91%)	13	NA	NA
WP_000178146.1|526495_527206_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
WP_001144248.1|527224_527884_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	55.6	5.2e-64
WP_000160532.1|528148_529315_-|transposase	IS30-like element ISSag9 family transposase	transposase	NA	NA	NA	NA
WP_000715592.1|529523_530159_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
WP_000364565.1|530178_531042_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	49.7	7.3e-74
WP_000358198.1|531071_531398_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000425856.1|531397_532267_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	4.9e-110
WP_000603277.1|532536_533172_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_001167085.1|534464_535013_+	acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
WP_000232156.1|535075_536257_+	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.6	7.0e-168
WP_000966772.1|536311_536788_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
WP_000287944.1|536789_537146_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	71.8	1.5e-41
WP_000767484.1|537185_538013_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.0	4.3e-124
>prophage 4
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	1440243	1447797	2063270	transposase,integrase	Streptococcus_phage(50.0%)	11	1434057:1434071	1455496:1455510
1434057:1434071	attL	ATGGAAAACAATCAT	NA	NA	NA	NA
WP_000353149.1|1440243_1440900_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
WP_000594360.1|1440909_1442187_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000508795.1|1442928_1443090_+	NINE protein	NA	NA	NA	NA	NA
WP_001867107.1|1443262_1443472_-|transposase	transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
WP_001865698.1|1443597_1443858_-|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.0	3.4e-11
WP_001122304.1|1443879_1444080_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_000640620.1|1444241_1444646_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001872365.1|1444645_1444912_+	hypothetical protein	NA	Q77YW7	Streptococcus_phage	65.2	9.2e-20
WP_071659971.1|1444914_1445529_+|integrase	site-specific integrase	integrase	F8HGP4	Streptococcus_phage	60.7	9.2e-55
WP_001068667.1|1445673_1446021_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000595708.1|1446600_1447797_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	54.5	4.6e-103
1455496:1455510	attR	ATGATTGTTTTCCAT	NA	NA	NA	NA
>prophage 5
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	1629698	1659443	2063270	integrase	Streptococcus_phage(85.71%)	29	1621430:1621446	1658972:1658988
1621430:1621446	attL	ACAAGGTCAGCAAAATA	NA	NA	NA	NA
WP_000182605.1|1629698_1632341_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	28.5	3.2e-56
WP_000593336.1|1632453_1633266_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000020721.1|1633280_1633895_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_002835202.1|1634117_1635335_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	98.5	3.0e-230
WP_000814512.1|1635416_1635620_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	97.0	2.0e-30
WP_000857133.1|1636076_1636307_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804599.1|1636303_1636726_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	97.9	3.7e-71
WP_001227347.1|1637230_1637584_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|1637643_1637811_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691727.1|1637929_1639849_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	100.0	0.0e+00
WP_001791010.1|1639864_1639981_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224319.1|1640225_1641158_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_000769868.1|1641154_1642156_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|1642152_1644330_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|1644332_1646780_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|1646763_1647270_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|1647244_1647742_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|1647858_1648080_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|1648122_1649328_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|1649350_1649503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|1649505_1650891_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|1650919_1651306_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|1651321_1651636_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000683374.1|1652038_1652245_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_000013400.1|1652285_1654520_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.0	2.3e-95
WP_000156042.1|1654532_1654949_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_000804611.1|1655112_1656117_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000715537.1|1656200_1656569_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000039152.1|1656659_1659443_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.1	5.1e-20
1658972:1658988	attR	TATTTTGCTGACCTTGT	NA	NA	NA	NA
>prophage 6
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	2009632	2024196	2063270	integrase	Streptococcus_phage(66.67%)	22	2007667:2007686	2021599:2021618
2007667:2007686	attL	AATTAAAGCATTTTGTTGTA	NA	NA	NA	NA
WP_000661535.1|2009632_2010121_-	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	56.2	1.2e-46
WP_001258774.1|2010205_2010811_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	46.8	7.0e-39
WP_000694577.1|2010994_2011168_-	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
WP_000838178.1|2011427_2012930_-	DNA primase	NA	Q9AZI5	Lactococcus_phage	37.2	2.7e-63
WP_001029298.1|2012949_2013807_-	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	72.0	4.3e-119
WP_000492120.1|2013807_2014080_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	69.8	2.5e-28
WP_000174504.1|2014072_2014414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000206024.1|2014410_2014773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001007346.1|2014784_2014982_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017644535.1|2014962_2015103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000877492.1|2015099_2015432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000648621.1|2015686_2015929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000845516.1|2015955_2016576_-	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	42.3	1.4e-39
WP_017644534.1|2016629_2016791_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000906796.1|2016956_2017649_+	helix-turn-helix transcriptional regulator	NA	A0A0P0IV68	Lactobacillus_phage	49.2	4.3e-08
WP_001137532.1|2017753_2017963_+	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_000350953.1|2018655_2018997_+	hypothetical protein	NA	A0A1S5SDB5	Streptococcus_phage	59.7	2.2e-13
WP_000429449.1|2019023_2019989_+	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	51.1	7.1e-86
WP_011324955.1|2020327_2021494_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	70.4	3.3e-154
WP_000092759.1|2021600_2022212_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
2021599:2021618	attR	AATTAAAGCATTTTGTTGTA	NA	NA	NA	NA
WP_001278152.1|2022541_2022829_-	Veg family protein	NA	NA	NA	NA	NA
WP_000852645.1|2022840_2024196_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	62.6	1.2e-152
>prophage 7
NZ_LS483342	Streptococcus agalactiae strain NCTC11930 chromosome 1	2063270	2032516	2039720	2063270		uncultured_Caudovirales_phage(16.67%)	8	NA	NA
WP_001042661.1|2032516_2033221_-	transglycosylase SLT domain-containing protein	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	3.2e-27
WP_000029067.1|2033326_2033866_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	46.4	3.0e-17
WP_000359358.1|2034081_2034876_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000510606.1|2034868_2035711_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000181757.1|2035686_2036526_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
WP_000239224.1|2036525_2037068_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000217765.1|2037190_2038474_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
WP_000706190.1|2038475_2039720_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.5	1.7e-87
