The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	131940	207210	2102271	bacteriocin,tRNA,protease	Only_Syngen_Nebraska_virus(14.29%)	57	NA	NA
WP_100284999.1|131940_132687_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_111679124.1|132679_133441_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_014621078.1|133430_133901_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002949220.1|141790_142288_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_041828985.1|142387_143230_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_111679126.1|143371_144655_+	trigger factor	NA	NA	NA	NA	NA
WP_024009706.1|144812_145388_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_002949230.1|145638_147243_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	46.2	6.6e-137
WP_084828437.1|147337_147808_+	DUF3013 family protein	NA	NA	NA	NA	NA
WP_111679128.1|147823_147991_+	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA	NA
WP_099421309.1|148131_148299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039671059.1|148301_149120_+	replication initiator protein A	NA	NA	NA	NA	NA
WP_111679130.1|149268_150624_+	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	55.9	4.0e-127
WP_111679132.1|150607_151036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621274.1|151046_151430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621275.1|151438_151672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041829000.1|151674_152259_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002936460.1|152335_152824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621278.1|152823_154641_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_001072171.1|154658_154901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621279.1|154919_155774_+	conjugal transfer protein TrbL	NA	NA	NA	NA	NA
WP_001097579.1|155835_156189_+	PrgI family protein	NA	NA	NA	NA	NA
WP_162173396.1|156145_158497_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_111679136.1|158498_161300_+	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	33.3	1.7e-07
WP_111679138.1|161386_162232_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_014621283.1|162228_162819_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA	NA
WP_111679140.1|163099_167995_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_100262165.1|167995_168187_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_111679142.1|168170_168722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679144.1|168770_174233_+	DEAD/DEAH box helicase family protein	NA	A0A248SL14	Klebsiella_phage	31.2	1.1e-151
WP_111679146.1|174730_176509_+	reverse transcriptase	NA	A0A0U4J920	Pseudomonas_phage	28.3	3.1e-26
WP_162173397.1|176646_177990_+	helicase	NA	H2DE57	Erwinia_phage	32.0	5.7e-57
WP_111679148.1|178060_178360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679150.1|178373_178664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679152.1|178957_180580_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_111679154.1|180576_181905_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_111679156.1|182167_182806_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_111679158.1|183974_184202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039670295.1|184198_184588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162173398.1|184634_184925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039670297.1|186581_187058_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_111679164.1|187057_187834_+	zeta toxin family protein	NA	NA	NA	NA	NA
WP_039670299.1|187817_188627_+	DUF1837 domain-containing protein	NA	NA	NA	NA	NA
WP_111679166.1|188623_191707_+	DEAD/DEAH box helicase	NA	M1HM79	Paramecium_bursaria_Chlorella_virus	24.8	5.7e-20
WP_111679168.1|191731_192628_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_111679170.1|192968_193331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039671039.1|193333_193699_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_111679172.1|193685_195569_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_024404826.1|196095_196437_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111679174.1|196438_197179_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_039671036.1|197189_198530_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_096811960.1|198577_198733_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_111679175.1|198831_200193_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_039671027.1|202656_202914_+|bacteriocin	ThmA bacteriocin	bacteriocin	NA	NA	NA	NA
WP_111679177.1|202930_203110_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_111679179.1|205485_206511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679181.1|206514_207210_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 2
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	568183	624838	2102271	integrase,transposase,tRNA,protease	Streptococcus_phage(28.57%)	53	595362:595379	633056:633073
WP_002949990.1|568183_569101_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_111679345.1|569386_571423_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_002949992.1|571435_571693_+	DUF896 family protein	NA	NA	NA	NA	NA
WP_172451550.1|571809_572112_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	63.6	3.7e-25
WP_172451551.1|572277_572439_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	60.4	5.2e-10
WP_111679347.1|573353_574745_+	amino acid permease	NA	NA	NA	NA	NA
WP_084828559.1|574814_575450_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_084825817.1|575751_575928_+	PTS transporter subunit EIIB	NA	NA	NA	NA	NA
WP_111679349.1|576423_577659_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_111679351.1|577694_578453_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	36.1	1.2e-19
WP_084828561.1|578813_579077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084828562.1|579140_579548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084828563.1|579544_580021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084829202.1|580164_580389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084828564.1|580503_581409_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002950014.1|581417_581879_+	signal peptidase II	NA	NA	NA	NA	NA
WP_111679353.1|581862_582753_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.3	1.4e-08
WP_082308850.1|582971_583493_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_084825624.1|583839_585117_+	hypothetical protein	NA	Q9KX94	Enterobacteria_phage	38.6	5.4e-65
WP_002947266.1|585141_586068_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	30.0	1.1e-24
WP_065972989.1|586220_587309_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	2.0e-60
WP_024009777.1|587653_590833_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_111679355.1|591209_591968_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_014621268.1|594435_594939_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_011680864.1|595013_595382_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
595362:595379	attL	GCTTCAGTTACTCTTAAA	NA	NA	NA	NA
WP_014294671.1|595641_595815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084825871.1|595811_596636_+	replication initiator protein A	NA	NA	NA	NA	NA
WP_093528739.1|596793_598149_+	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	55.9	7.6e-126
WP_039671001.1|598132_598561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679357.1|598570_598954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679359.1|598963_599197_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_111679361.1|599199_599781_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_111679363.1|599857_600346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679365.1|600345_602166_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_074485048.1|602183_602426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679367.1|602442_603297_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_111679369.1|603358_603712_+	PrgI family protein	NA	NA	NA	NA	NA
WP_111679371.1|603668_606020_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_099390636.1|608830_609424_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA	NA
WP_111679374.1|610543_610903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679376.1|610912_611278_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA	NA
WP_111679378.1|613221_614601_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_111679380.1|614593_615310_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.7	3.6e-26
WP_050572218.1|615512_615683_+	type A2 lantipeptide	NA	NA	NA	NA	NA
WP_111679382.1|615738_617763_+	ATP-binding cassette domain-containing protein	NA	A0A076FI99	Aureococcus_anophage	26.2	1.5e-13
WP_111679384.1|617816_618725_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	46.4	6.5e-41
WP_111679386.1|618726_619482_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_111679388.1|619478_620213_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_111679390.1|620728_620953_+	helix-turn-helix transcriptional regulator	NA	A0A1L2JY18	Aeribacillus_phage	37.5	4.1e-05
WP_000860228.1|621224_621473_+	DUF3173 family protein	NA	NA	NA	NA	NA
WP_111679392.1|621475_622681_+|integrase	site-specific integrase	integrase	A0A0S2GLI2	Bacillus_phage	31.1	4.5e-29
WP_172451562.1|622905_624162_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	72.2	3.9e-169
WP_155085483.1|624613_624838_-|transposase	transposase	transposase	NA	NA	NA	NA
633056:633073	attR	GCTTCAGTTACTCTTAAA	NA	NA	NA	NA
>prophage 3
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	722316	773232	2102271	holin,tail,terminase,integrase,portal,capsid	Streptococcus_phage(98.44%)	66	727540:727582	768505:768547
WP_111679424.1|722316_723318_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_084828604.1|723376_723574_+	MmcQ family protein	NA	NA	NA	NA	NA
WP_022096976.1|724459_725575_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	100.0	2.3e-157
WP_084825864.1|725613_726069_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	100.0	1.0e-79
WP_100262180.1|726277_727582_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	100.0	2.2e-247
727540:727582	attL	AGAATACCGTGGTTTGAAATCATTCTACAACTTGAAAAAATAA	NA	NA	NA	NA
WP_111679427.1|727641_728811_-|integrase	site-specific integrase	integrase	W6LMU7	Streptococcus_phage	100.0	1.7e-219
WP_084828607.1|728952_729381_-	Ltp family lipoprotein	NA	W6LMS1	Streptococcus_phage	100.0	2.2e-23
WP_111679429.1|729460_729829_-	ImmA/IrrE family metallo-endopeptidase	NA	W6LM52	Streptococcus_phage	100.0	2.0e-65
WP_111679772.1|729835_730186_-	helix-turn-helix transcriptional regulator	NA	W6LLD7	Streptococcus_phage	100.0	2.5e-57
WP_111679431.1|730371_730599_+	helix-turn-helix transcriptional regulator	NA	W6LP64	Streptococcus_phage	100.0	1.5e-34
WP_111679433.1|730616_731519_+	DUF3102 domain-containing protein	NA	W6LMU8	Streptococcus_phage	100.0	1.0e-158
WP_111679435.1|731511_732060_+	ORF6C domain-containing protein	NA	W6LMS2	Streptococcus_phage	100.0	8.1e-95
WP_111679437.1|732065_732335_+	excisionase	NA	W6LM55	Streptococcus_phage	100.0	1.8e-47
WP_111679439.1|732312_732621_+	hypothetical protein	NA	W6LLE2	Streptococcus_phage	100.0	4.8e-52
WP_111679441.1|732758_733022_+	hypothetical protein	NA	W6LP65	Streptococcus_phage	100.0	7.2e-49
WP_167740659.1|733040_733199_+	hypothetical protein	NA	W6LMU9	Streptococcus_phage	100.0	3.4e-22
WP_111679443.1|733415_734264_+	DnaD domain protein	NA	A0A2I6QQV2	Streptococcus_phage	83.1	3.9e-112
WP_111679445.1|734276_735059_+	ATP-binding protein	NA	W6LLE6	Streptococcus_phage	100.0	3.9e-143
WP_111679447.1|735055_735238_+	hypothetical protein	NA	W6LP66	Streptococcus_phage	100.0	2.6e-26
WP_111679449.1|735363_736020_+	ERF family protein	NA	W6LMV0	Streptococcus_phage	100.0	2.3e-112
WP_015980195.1|736022_736982_+	DUF1351 domain-containing protein	NA	W6LMS4	Streptococcus_phage	100.0	9.3e-163
WP_111679451.1|737002_737467_+	single-stranded DNA-binding protein	NA	W6LM61	Streptococcus_phage	100.0	3.5e-83
WP_111679453.1|737476_737938_+	RusA family crossover junction endodeoxyribonuclease	NA	W6LLF0	Streptococcus_phage	100.0	4.4e-86
WP_111679455.1|737934_738174_+	hypothetical protein	NA	W6LP67	Streptococcus_phage	100.0	3.6e-39
WP_167740660.1|738331_738493_+	hypothetical protein	NA	W6LMS5	Streptococcus_phage	100.0	3.1e-23
WP_111679773.1|738887_739466_+	DUF1642 domain-containing protein	NA	W6LLF4	Streptococcus_phage	100.0	2.7e-109
WP_111679457.1|739586_740090_+	DUF1642 domain-containing protein	NA	W6LMV2	Streptococcus_phage	100.0	9.7e-95
WP_111679459.1|740090_740513_+	helix-turn-helix domain-containing protein	NA	W6LMS6	Streptococcus_phage	100.0	1.6e-74
WP_111679461.1|740481_740790_+	DUF1372 family protein	NA	W6LM66	Streptococcus_phage	100.0	1.7e-49
WP_111679463.1|740786_741221_+	hypothetical protein	NA	W6LLF9	Streptococcus_phage	100.0	2.1e-82
WP_111679465.1|741217_741466_+	hypothetical protein	NA	W6LP69	Streptococcus_phage	100.0	2.0e-40
WP_133264102.1|741453_741549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111679469.1|741535_742243_+	DUF1340 domain-containing protein	NA	W6LMV3	Streptococcus_phage	100.0	4.2e-128
WP_084828630.1|742455_742872_+	autolysin	NA	W6LMS7	Streptococcus_phage	100.0	2.1e-74
WP_111679471.1|743011_743506_+|terminase	terminase small subunit	terminase	W6LM69	Streptococcus_phage	99.3	6.0e-73
WP_111679473.1|743492_744728_+|terminase	PBSX family phage terminase large subunit	terminase	W6LLG2	Streptococcus_phage	100.0	1.9e-245
WP_167740661.1|744733_746236_+|portal	phage portal protein	portal	W6LP70	Streptococcus_phage	100.0	8.3e-283
WP_111679477.1|746239_747133_+|capsid	minor capsid protein	capsid	W6LMV4	Streptococcus_phage	100.0	2.5e-162
WP_111679479.1|747314_747908_+	DUF4355 domain-containing protein	NA	W6LMS8	Streptococcus_phage	100.0	2.0e-51
WP_111679480.1|747924_748284_+	hypothetical protein	NA	W6LM71	Streptococcus_phage	100.0	6.1e-59
WP_111679482.1|748306_749353_+|capsid	major capsid protein	capsid	W6LLG5	Streptococcus_phage	100.0	6.8e-191
WP_167740662.1|749368_749524_+	hypothetical protein	NA	W6LP71	Streptococcus_phage	100.0	3.7e-21
WP_111679484.1|749541_749886_+	hypothetical protein	NA	W6LMV5	Streptococcus_phage	100.0	1.3e-58
WP_111679488.1|750196_750535_+	HK97 gp10 family phage protein	NA	W6LM73	Streptococcus_phage	100.0	7.3e-54
WP_111679490.1|750536_750923_+	DUF3168 domain-containing protein	NA	W6LLG8	Streptococcus_phage	100.0	1.0e-67
WP_111679492.1|750934_751441_+|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	100.0	8.0e-89
WP_084828644.1|751518_751872_+	hypothetical protein	NA	W6LMV6	Streptococcus_phage	100.0	3.0e-58
WP_084828645.1|751922_752240_+	hypothetical protein	NA	W6LMT0	Streptococcus_phage	100.0	5.1e-41
WP_111679494.1|752229_756846_+|tail	phage tail protein	tail	W6LM75	Streptococcus_phage	100.0	1.1e-280
WP_111679496.1|756845_758381_+|tail	phage tail family protein	tail	W6LLH2	Streptococcus_phage	100.0	2.1e-310
WP_111679498.1|758380_761815_+|tail	phage tail protein	tail	W6LP73	Streptococcus_phage	100.0	0.0e+00
WP_111679500.1|761817_763827_+	DUF859 domain-containing protein	NA	W6LMV7	Streptococcus_phage	100.0	0.0e+00
WP_111679502.1|763842_764265_+	DUF1366 domain-containing protein	NA	W6LMT1	Streptococcus_phage	100.0	8.8e-65
WP_167740663.1|764288_764435_+	hypothetical protein	NA	W6LM78	Streptococcus_phage	100.0	7.3e-19
WP_111679504.1|764448_764772_+	hypothetical protein	NA	W6LLH5	Streptococcus_phage	100.0	8.5e-52
WP_111679774.1|764780_765023_+|holin	phage holin	holin	W6LP74	Streptococcus_phage	100.0	1.7e-36
WP_111679506.1|765024_765870_+	peptidoglycan hydrolase	NA	W6LMV8	Streptococcus_phage	100.0	8.5e-168
WP_133264101.1|766354_766699_+	hypothetical protein	NA	W6LMT2	Streptococcus_phage	100.0	1.7e-58
WP_111679509.1|766720_767272_+	anti-CRISPR protein AcrIIA6	NA	W6LM80	Streptococcus_phage	100.0	1.8e-102
WP_111679511.1|767297_767549_+	hypothetical protein	NA	W6LLH9	Streptococcus_phage	100.0	1.3e-39
WP_016068270.1|767574_767754_+	hypothetical protein	NA	W6LP75	Streptococcus_phage	100.0	2.8e-28
WP_111679513.1|767812_768235_+	hypothetical protein	NA	W6LMV9	Streptococcus_phage	100.0	2.5e-72
WP_014621363.1|768699_768885_-	hypothetical protein	NA	W6LMT3	Streptococcus_phage	100.0	2.7e-26
768505:768547	attR	AGAATACCGTGGTTTGAAATCATTCTACAACTTGAAAAAATAA	NA	NA	NA	NA
WP_014621364.1|769046_771233_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	100.0	0.0e+00
WP_014621365.1|771394_772558_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	100.0	1.2e-220
WP_002947238.1|772554_773232_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	100.0	1.9e-122
>prophage 4
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	887615	896538	2102271		Bacillus_phage(50.0%)	8	NA	NA
WP_011225789.1|887615_888221_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	33.7	1.0e-18
WP_111679543.1|888315_889566_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.1	2.0e-96
WP_100273364.1|889572_890550_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_100273365.1|890551_891163_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	42.2	1.6e-22
WP_100273366.1|891194_892934_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	6.9e-47
WP_100273367.1|892923_894672_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	5.5e-52
WP_002885174.1|894847_894979_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_100262419.1|894987_896538_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	29.3	2.0e-42
>prophage 5
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	1414952	1481890	2102271	integrase,transposase	Streptococcus_phage(22.22%)	42	1430095:1430109	1482684:1482698
WP_172451556.1|1414952_1415627_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	58.3	1.0e-62
WP_071417530.1|1415696_1416146_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_111679649.1|1416328_1417192_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014608497.1|1417178_1418471_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_043878288.1|1418659_1419292_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_111679650.1|1420171_1421014_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.2	2.7e-57
WP_111679651.1|1421146_1422148_-	UDP-glucose 4-epimerase GalE	NA	Q58M85	Prochlorococcus_phage	30.9	6.5e-34
WP_111679652.1|1422482_1423967_+	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_011681366.1|1424187_1424532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111679653.1|1426504_1426723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084826059.1|1426768_1427128_-	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	51.3	1.5e-25
WP_111679654.1|1427124_1428540_-	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	72.8	1.2e-198
WP_111679779.1|1428718_1429759_-	hypothetical protein	NA	NA	NA	NA	NA
1430095:1430109	attL	GTGATGTTATCCTTA	NA	NA	NA	NA
WP_111679655.1|1430916_1434039_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	23.5	4.6e-25
WP_111679656.1|1434072_1435356_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	29.3	1.4e-12
WP_111679657.1|1435355_1437920_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	44.9	4.6e-108
WP_111679659.1|1439006_1441100_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_084828952.1|1443428_1443692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084828953.1|1444224_1444446_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_084828954.1|1444442_1444847_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	39.3	8.8e-14
WP_172451573.1|1444931_1446188_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	57.1	9.1e-126
WP_084828951.1|1446479_1447049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084828955.1|1449555_1452735_-	SMC family ATPase	NA	NA	NA	NA	NA
WP_084828956.1|1452731_1453940_-	exonuclease SbcCD subunit D	NA	D9J0R3	Brochothrix_phage	22.6	1.4e-06
WP_111679660.1|1454789_1457870_-	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	32.3	1.1e-143
WP_084828960.1|1457873_1459778_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_084828961.1|1459883_1460930_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_084828962.1|1460998_1462000_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.4	4.0e-47
WP_100262617.1|1462027_1463509_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_111679661.1|1463528_1464695_-	galactokinase	NA	NA	NA	NA	NA
WP_100262619.1|1466310_1466388_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_157795613.1|1466412_1466604_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A1B1P773	Bacillus_phage	51.9	4.0e-09
WP_084828965.1|1466625_1466814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084828967.1|1468945_1469227_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	31.7	5.5e-07
WP_100262614.1|1470828_1473093_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA	NA
WP_084828969.1|1473155_1473752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084828970.1|1473732_1475262_-	DUF1310 family protein	NA	NA	NA	NA	NA
WP_100273505.1|1475930_1477508_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.6	2.2e-15
WP_111679662.1|1478655_1479831_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	27.2	3.8e-33
WP_133264038.1|1479910_1480126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111679663.1|1480466_1481321_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_162173387.1|1481680_1481890_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A1P8CWQ3	Bacillus_phage	44.8	1.0e-05
1482684:1482698	attR	TAAGGATAACATCAC	NA	NA	NA	NA
>prophage 6
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	1676157	1768029	2102271	transposase,tRNA,protease,bacteriocin	Bacillus_virus(19.05%)	83	NA	NA
WP_111679683.1|1676157_1677333_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	6.3e-36
WP_084829052.1|1677805_1679920_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	39.3	3.2e-123
WP_084829053.1|1680633_1681725_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_022096462.1|1681731_1682478_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011227491.1|1682796_1683150_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_084829055.1|1683173_1683764_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_065972527.1|1683760_1684393_-	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	31.0	2.1e-17
WP_002951701.1|1684497_1684815_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_100262470.1|1685053_1686172_-	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
WP_002951705.1|1686171_1686699_-	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA	NA
WP_111679684.1|1687817_1688210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084829059.1|1688307_1689750_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_100273457.1|1689749_1691216_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002884769.1|1691215_1691518_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_167740671.1|1692450_1693863_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_111679685.1|1695535_1696087_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	39.8	2.9e-23
WP_084826115.1|1696149_1696935_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002951721.1|1697194_1698409_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_084826116.1|1698762_1699215_+	universal stress protein	NA	NA	NA	NA	NA
WP_111679686.1|1700856_1701657_-	pyruvate formate lyase-activating protein	NA	NA	NA	NA	NA
WP_024703987.1|1702652_1703984_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_111679687.1|1704094_1704877_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.0	4.1e-15
WP_084829062.1|1705495_1707562_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_011226461.1|1707570_1707813_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084829063.1|1707809_1708358_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	43.5	2.6e-37
WP_111679688.1|1708350_1709301_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	49.3	2.5e-35
WP_172451565.1|1709385_1710462_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_095559436.1|1710439_1710937_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	28.8	3.7e-14
WP_084829066.1|1710970_1711519_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_084829067.1|1711660_1712581_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.0	4.7e-87
WP_084829068.1|1712646_1712871_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_084829069.1|1713085_1713829_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	1.1e-30
WP_100262472.1|1713828_1714575_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_084829071.1|1714962_1715793_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_065972545.1|1716373_1716607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084829072.1|1716899_1718003_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_084829073.1|1718280_1720590_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.1	7.6e-110
WP_167740672.1|1721687_1722140_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_084829076.1|1724489_1725176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084829077.1|1725251_1726007_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_111679689.1|1726003_1726654_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.0	8.3e-22
WP_084829079.1|1726855_1727812_-	serine hydrolase	NA	NA	NA	NA	NA
WP_084829080.1|1727811_1728567_-	peptidase	NA	NA	NA	NA	NA
WP_172451558.1|1730036_1730666_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	60.1	5.1e-61
WP_111679690.1|1731317_1732337_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_111679691.1|1732343_1733267_-	DMT family transporter	NA	NA	NA	NA	NA
WP_084828681.1|1733256_1734021_-	DUF4931 domain-containing protein	NA	NA	NA	NA	NA
WP_084828680.1|1734008_1734851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084828679.1|1734837_1735512_-	DlpA protein	NA	E3T536	Cafeteria_roenbergensis_virus	26.0	9.9e-10
WP_084828678.1|1735498_1736605_-	isocitrate/isopropylmalate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_084828677.1|1736601_1737363_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_111679692.1|1737359_1738289_-	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	24.4	7.0e-14
WP_172451559.1|1739600_1740185_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	55.9	8.5e-50
WP_002951781.1|1740280_1741144_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	34.4	3.9e-27
WP_111679693.1|1741264_1743532_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_084829082.1|1743611_1743992_-|bacteriocin	bacteriocin secretion protein	bacteriocin	NA	NA	NA	NA
WP_002945924.1|1744116_1744380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197070.1|1744701_1744998_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_022096485.1|1745162_1746089_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_011681564.1|1746275_1746455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_084829084.1|1746483_1746876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021152514.1|1746887_1747127_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_021152515.1|1747712_1747967_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011226492.1|1748948_1749116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681568.1|1749473_1749635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226494.1|1749641_1749872_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681569.1|1750227_1750428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681570.1|1750446_1750623_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011226492.1|1751604_1751772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608661.1|1752129_1752273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226494.1|1752279_1752510_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681571.1|1752766_1753504_+	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	21.3	5.4e-09
WP_023909916.1|1753497_1754838_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011681573.1|1754855_1755017_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681574.1|1755031_1756399_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_133264081.1|1756414_1758568_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	4.8e-42
WP_100262366.1|1759581_1761327_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.5	1.2e-54
WP_024010065.1|1761319_1763077_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	28.8	4.4e-49
WP_011226503.1|1763675_1764203_-	VanZ family protein	NA	NA	NA	NA	NA
WP_100262375.1|1764204_1765314_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_014621927.1|1765377_1766100_-	DUF1027 domain-containing protein	NA	NA	NA	NA	NA
WP_111679782.1|1766160_1767510_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_171815042.1|1767792_1768029_-|bacteriocin	ComC/BlpC family peptide pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 7
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	1881401	1942197	2102271	transposase,tRNA,protease,bacteriocin	Streptococcus_phage(35.71%)	55	NA	NA
WP_095559415.1|1881401_1882548_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	2.3e-46
WP_111679729.1|1882748_1883759_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_082309139.1|1883946_1886028_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	29.0	1.6e-66
WP_084829114.1|1886248_1886719_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_084829115.1|1886737_1887151_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_084829116.1|1887367_1888192_-	pur operon repressor	NA	A0A1X9I6E2	Streptococcus_phage	28.8	3.1e-05
WP_011681651.1|1888285_1889227_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_084826150.1|1889216_1890491_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_084826151.1|1890492_1891125_-	thiamine diphosphokinase	NA	NA	NA	NA	NA
WP_084826152.1|1891117_1891777_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_084829117.1|1891784_1892657_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_011227569.1|1892913_1893786_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_024704318.1|1893930_1894491_-	ribonuclease M5	NA	NA	NA	NA	NA
WP_002951968.1|1894483_1895260_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_024704319.1|1895313_1895745_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_002951972.1|1895804_1896119_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	46.2	3.0e-17
WP_011226585.1|1896314_1897097_+	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	36.9	5.1e-26
WP_002951977.1|1897554_1897890_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_172451576.1|1898075_1899329_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	57.3	4.5e-125
WP_014608716.1|1904884_1905022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_084829118.1|1905133_1906276_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.4	2.7e-84
WP_111679783.1|1906528_1906999_-|transposase	IS200/IS605 family transposase	transposase	G9CU69	Helicobacter_phage	29.5	5.8e-09
WP_002953513.1|1907179_1907314_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_084829120.1|1908203_1909253_-	protein jag	NA	NA	NA	NA	NA
WP_002953525.1|1909264_1910071_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_037600055.1|1910185_1910521_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_071417372.1|1910605_1911991_-	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_084829121.1|1912319_1913519_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_084829122.1|1914419_1915874_-|tRNA	glutamate--tRNA ligase	tRNA	A0A2K9L481	Tupanvirus	30.3	6.9e-08
WP_024704232.1|1918205_1918895_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002953535.1|1918994_1919420_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_111679730.1|1919591_1919945_+	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_002947059.1|1920036_1920534_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_080998440.1|1921459_1922821_-	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_002947069.1|1922998_1923445_-	dUTP diphosphatase	NA	Q332E8	Clostridium_botulinum_C_phage	50.7	8.5e-34
WP_100273185.1|1924280_1925534_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.4	1.2e-53
WP_011226601.1|1927139_1928162_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_111679731.1|1928180_1929095_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.5	3.5e-74
WP_084826159.1|1929140_1929815_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_111679732.1|1929805_1930333_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002951995.1|1930401_1931535_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA	NA
WP_002951996.1|1931613_1932312_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_011681672.1|1933266_1934100_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_014621998.1|1934468_1934636_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_011681674.1|1934688_1934952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011681675.1|1935032_1935551_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_011227579.1|1936314_1936707_-	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	48.5	1.5e-26
WP_011226611.1|1936912_1937140_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_071417489.1|1937154_1938186_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_002952017.1|1938323_1938947_-|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_011226613.1|1938956_1939271_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_002952020.1|1939267_1939552_-	DUF4651 domain-containing protein	NA	NA	NA	NA	NA
WP_014727717.1|1939651_1940719_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
WP_011226616.1|1940734_1941505_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	36.1	2.8e-32
WP_096811680.1|1941534_1942197_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 8
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	1983573	2028233	2102271	integrase,transposase	Streptococcus_phage(53.33%)	56	1981716:1981730	1996675:1996689
1981716:1981730	attL	AAAAGCAACCAAACC	NA	NA	NA	NA
WP_111679738.1|1983573_1984770_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	65.9	2.0e-146
WP_021371332.1|1984849_1985053_-	hypothetical protein	NA	A0A1S5SF07	Streptococcus_phage	79.1	2.5e-25
WP_058621900.1|1985442_1985673_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	40.0	7.0e-08
WP_039670424.1|1986450_1988574_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	64.7	1.2e-247
WP_099046847.1|1988800_1989304_+	signal peptidase II	NA	NA	NA	NA	NA
WP_039670422.1|1989474_1989810_-	Cd(II)-sensing metalloregulatory transcriptional repressor CadC	NA	E4ZFI8	Streptococcus_phage	43.8	9.8e-19
WP_111679739.1|1989981_1991126_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.1	2.1e-28
WP_111679740.1|1991188_1992445_-	MFS transporter	NA	NA	NA	NA	NA
WP_111679741.1|1992474_1992747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681261.1|1993045_1994050_+|transposase	IS5-like element ISSth7 family transposase	transposase	NA	NA	NA	NA
WP_111679784.1|1994758_1995058_-	hypothetical protein	NA	A0A1B0RX98	Streptococcus_phage	55.1	2.1e-20
WP_111679742.1|1995050_1995416_-	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	46.1	1.4e-23
WP_172451560.1|1997660_1998131_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	64.8	3.2e-23
1996675:1996689	attR	AAAAGCAACCAAACC	NA	NA	NA	NA
WP_100273556.1|1998153_1999035_-	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_100262287.1|2000115_2000367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002953570.1|2000606_2000762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002953561.1|2000900_2001026_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_111679743.1|2001141_2001672_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002952134.1|2002085_2002472_-	50S ribosomal protein L17	NA	NA	NA	NA	NA
WP_100262289.1|2002489_2003428_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA	NA
WP_002887520.1|2003476_2003860_-	30S ribosomal protein S11	NA	NA	NA	NA	NA
WP_002885820.1|2003887_2004253_-	30S ribosomal protein S13	NA	NA	NA	NA	NA
WP_000868345.1|2004270_2004387_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_084829152.1|2004412_2004631_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002952136.1|2004748_2005405_-	adenylate kinase	NA	NA	NA	NA	NA
WP_111679744.1|2005536_2006832_-	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
WP_014622040.1|2006848_2007289_-	50S ribosomal protein L15	NA	NA	NA	NA	NA
WP_002946172.1|2007416_2007599_-	50S ribosomal protein L30	NA	NA	NA	NA	NA
WP_002946171.1|2007613_2008108_-	30S ribosomal protein S5	NA	NA	NA	NA	NA
WP_011681714.1|2008126_2008483_-	50S ribosomal protein L18	NA	NA	NA	NA	NA
WP_002946167.1|2008572_2009109_-	50S ribosomal protein L6	NA	NA	NA	NA	NA
WP_014622041.1|2009235_2009634_-	30S ribosomal protein S8	NA	NA	NA	NA	NA
WP_002946164.1|2009756_2009942_-	type Z 30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_002946163.1|2009959_2010502_-	50S ribosomal protein L5	NA	NA	NA	NA	NA
WP_084829154.1|2010528_2010834_-	50S ribosomal protein L24	NA	NA	NA	NA	NA
WP_002952155.1|2010914_2011283_-	50S ribosomal protein L14	NA	NA	NA	NA	NA
WP_002885836.1|2011307_2011568_-	30S ribosomal protein S17	NA	NA	NA	NA	NA
WP_002952156.1|2011595_2011802_-	50S ribosomal protein L29	NA	NA	NA	NA	NA
WP_084826184.1|2011811_2012225_-	50S ribosomal protein L16	NA	NA	NA	NA	NA
WP_084826185.1|2012228_2012882_-	30S ribosomal protein S3	NA	NA	NA	NA	NA
WP_002887063.1|2012894_2013239_-	50S ribosomal protein L22	NA	NA	NA	NA	NA
WP_002952159.1|2013254_2013533_-	30S ribosomal protein S19	NA	NA	NA	NA	NA
WP_084826186.1|2013626_2014460_-	50S ribosomal protein L2	NA	NA	NA	NA	NA
WP_002887066.1|2014477_2014774_-	50S ribosomal protein L23	NA	NA	NA	NA	NA
WP_084826187.1|2014773_2015397_-	50S ribosomal protein L4	NA	NA	NA	NA	NA
WP_002952166.1|2015421_2016048_-	50S ribosomal protein L3	NA	NA	NA	NA	NA
WP_002885653.1|2016164_2016473_-	30S ribosomal protein S10	NA	NA	NA	NA	NA
WP_100262292.1|2016716_2017718_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	30.8	2.0e-06
WP_084829157.1|2017799_2019623_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	27.4	1.8e-21
WP_002948620.1|2019619_2020030_-	membrane protein	NA	NA	NA	NA	NA
WP_084829158.1|2020026_2020461_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_111679745.1|2022161_2023454_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	37.6	2.5e-70
WP_084829161.1|2023689_2024196_-	DNA topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	41.1	1.9e-29
WP_014295309.1|2024485_2025655_-	MFS transporter	NA	NA	NA	NA	NA
WP_111679746.1|2025647_2026703_-	ThiF family adenylyltransferase	NA	A0A1V0SIK8	Klosneuvirus	29.1	4.5e-09
WP_111679747.1|2027048_2028233_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	27.5	8.3e-36
>prophage 9
NZ_LS483339	Streptococcus thermophilus strain NCTC12958 chromosome 1	2102271	2079806	2091193	2102271		Streptococcus_phage(25.0%)	12	NA	NA
WP_084829939.1|2079806_2080436_-	hypothetical protein	NA	Q4Z8Z7	Staphylococcus_phage	67.4	4.6e-25
WP_100262447.1|2080675_2081230_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	51.0	1.4e-25
WP_111679759.1|2081533_2082328_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_084829185.1|2082320_2083163_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	3.6e-17
WP_084829186.1|2083138_2083969_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.9	3.8e-19
WP_084826205.1|2083981_2084524_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_084829187.1|2084536_2085394_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_111679760.1|2085452_2086733_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.3	2.1e-21
WP_111679761.1|2086734_2087985_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	40.3	7.0e-94
WP_084829189.1|2088062_2088440_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	68.4	1.7e-22
WP_111679762.1|2088442_2089543_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_111679763.1|2089711_2091193_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	2.6e-95
