The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	174498	237635	1838787	transposase,tRNA,capsid,holin,terminase,tail,portal	Streptococcus_pyogenes_phage(55.0%)	71	NA	NA
WP_002988958.1|174498_175434_+|tRNA	methionyl-tRNA formyltransferase	tRNA	M4QRX9	Synechococcus_phage	38.5	6.0e-05
WP_011184816.1|175423_176746_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_002983660.1|176783_177524_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_111677403.1|177520_179419_+	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	B5LWE2	Feldmannia_species_virus	30.7	1.4e-21
WP_011054833.1|179541_180234_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_111695125.1|180230_181235_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002983671.1|181227_181869_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_111677401.1|181905_183306_+	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	42.3	6.0e-25
WP_002983674.1|183305_183683_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_111677400.1|183700_184642_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	77.9	1.6e-130
WP_002988970.1|184769_185402_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	54.3	4.2e-63
WP_047235421.1|185456_186782_+	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	51.3	6.3e-117
WP_002993195.1|186753_187419_+	ComF family protein	NA	NA	NA	NA	NA
WP_111695126.1|187498_188047_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_002983693.1|195775_196309_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_111677399.1|196388_197165_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_043885029.1|198570_199257_-	hypothetical protein	NA	A0A1P8VVT3	Streptococcus_phage	99.1	4.8e-121
WP_011054825.1|199427_199580_-	hypothetical protein	NA	A0A1P8VVQ0	Streptococcus_phage	100.0	5.2e-20
WP_011054824.1|199590_199968_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1P8VVK5	Streptococcus_phage	100.0	4.0e-69
WP_011528540.1|199951_200311_-	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN3	Streptococcus_phage	98.3	1.8e-58
WP_009881062.1|200499_200718_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVR5	Streptococcus_phage	100.0	4.1e-34
WP_011054822.1|200812_201064_+	hypothetical protein	NA	A0A1P8VVV6	Streptococcus_phage	98.8	1.4e-41
WP_011054821.1|201094_201232_+	hypothetical protein	NA	A0A1P8VVR9	Streptococcus_phage	91.1	9.2e-16
WP_063812425.1|201247_201562_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN6	Streptococcus_phage	96.2	7.0e-51
WP_011054820.1|201709_202192_+	siphovirus Gp157 family protein	NA	A0A1P8VVS5	Streptococcus_phage	99.4	4.6e-78
WP_002995975.1|202192_202873_+	AAA family ATPase	NA	A0A1P8VVS4	Streptococcus_phage	100.0	1.6e-129
WP_011054819.1|202974_204204_+	DEAD/DEAH box helicase	NA	A0A1P8VVM2	Streptococcus_phage	99.5	2.8e-236
WP_011054580.1|204218_204677_+	DUF669 domain-containing protein	NA	A0A1P8VVN0	Streptococcus_phage	99.3	5.0e-82
WP_011106664.1|204679_205492_+	bifunctional DNA primase/polymerase	NA	A0A1P8VVM6	Streptococcus_phage	98.9	4.6e-155
WP_023611301.1|205481_206963_+	nucleoside triphosphatase	NA	A0A1P8VVM0	Streptococcus_phage	99.4	4.2e-295
WP_002987985.1|207167_208031_+|transposase	IS982-like element ISSpy2 family transposase	transposase	NA	NA	NA	NA
WP_011054817.1|208176_208497_+	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	99.1	5.8e-53
WP_111677398.1|208480_208837_+	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	95.8	1.8e-58
WP_011018137.1|209078_209363_+	DUF3310 domain-containing protein	NA	A0A1P8VVP5	Streptococcus_phage	97.9	2.7e-49
WP_011054815.1|209359_209773_+	hypothetical protein	NA	Q938M1	Temperate_phage	63.1	1.2e-34
WP_011054814.1|209769_209940_+	hypothetical protein	NA	Q938M0	Temperate_phage	96.8	2.5e-10
WP_032461310.1|209936_210221_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	91.5	5.0e-40
WP_011054813.1|210223_210559_+	hypothetical protein	NA	A0A097PAS4	Streptococcus_pyogenes_phage	100.0	4.7e-45
WP_011054812.1|210724_210910_+	hypothetical protein	NA	A0A097PBF0	Streptococcus_pyogenes_phage	100.0	7.0e-27
WP_111677397.1|211196_211700_+	DUF1642 domain-containing protein	NA	A0A097PAV5	Streptococcus_pyogenes_phage	98.2	2.2e-91
WP_002987493.1|211696_211867_+	hypothetical protein	NA	A0A097PAS8	Streptococcus_pyogenes_phage	100.0	2.9e-27
WP_011054810.1|212151_212586_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	94.4	2.2e-71
WP_011285571.1|213195_213576_+	hypothetical protein	NA	A0A097PAR5	Streptococcus_pyogenes_phage	100.0	1.0e-64
WP_009880266.1|213565_214840_+|terminase	PBSX family phage terminase large subunit	terminase	A0A097PAV9	Streptococcus_pyogenes_phage	100.0	1.1e-251
WP_009880265.1|214839_216165_+|portal	phage portal protein	portal	A0A097PAT2	Streptococcus_pyogenes_phage	100.0	7.4e-243
WP_009880264.1|216133_217042_+|capsid	minor capsid protein	capsid	A0A097PBF2	Streptococcus_pyogenes_phage	100.0	4.2e-88
WP_011054805.1|217048_217315_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	100.0	2.6e-38
WP_011054804.1|217464_218037_+	DUF4355 domain-containing protein	NA	A0A097PAW3	Streptococcus_pyogenes_phage	100.0	1.2e-72
WP_009880261.1|218054_218945_+	hypothetical protein	NA	A0A097PAW2	Streptococcus_pyogenes_phage	99.4	8.6e-86
WP_009880260.1|218957_219251_+	Rho termination factor N-terminal domain-containing protein	NA	A0A097PBF3	Streptococcus_pyogenes_phage	100.0	2.0e-47
WP_009880259.1|219264_219609_+	hypothetical protein	NA	A0A097PAS2	Streptococcus_pyogenes_phage	100.0	1.1e-54
WP_009880258.1|219605_219917_+	hypothetical protein	NA	A0A097PAW7	Streptococcus_pyogenes_phage	99.0	2.6e-50
WP_009880257.1|219913_220309_+	hypothetical protein	NA	A0A097PAT9	Streptococcus_pyogenes_phage	100.0	1.8e-59
WP_009880256.1|220310_220721_+	DUF5072 family protein	NA	A0A097PAW5	Streptococcus_pyogenes_phage	100.0	1.4e-70
WP_111677396.1|220732_221239_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	100.0	2.6e-79
WP_009880254.1|221251_221569_+	hypothetical protein	NA	A0A097PAS6	Streptococcus_pyogenes_phage	100.0	4.9e-52
WP_111677395.1|221541_222000_+	hypothetical protein	NA	A0A097PAX1	Streptococcus_pyogenes_phage	99.3	8.6e-82
WP_009880250.1|223799_225284_+|tail	phage tail family protein	tail	A0A097PAW9	Streptococcus_pyogenes_phage	99.8	4.3e-292
WP_011054801.1|225284_228725_+|tail	phage tail protein	tail	A0A097PBF5	Streptococcus_pyogenes_phage	99.9	0.0e+00
WP_111677394.1|228729_230592_+	hypothetical protein	NA	A0A097PAT0	Streptococcus_pyogenes_phage	99.7	0.0e+00
WP_009880247.1|230602_230950_+	DUF1366 domain-containing protein	NA	A0A097PAX5	Streptococcus_pyogenes_phage	100.0	3.5e-59
WP_015055952.1|231099_231423_+	hypothetical protein	NA	A0A097PAX2	Streptococcus_pyogenes_phage	100.0	7.7e-53
WP_011054798.1|231422_231755_+|holin	phage holin	holin	A0A097PBF6	Streptococcus_pyogenes_phage	100.0	5.7e-51
WP_011054797.1|231756_232521_+	CHAP domain-containing protein	NA	A0A097PAT3	Streptococcus_pyogenes_phage	100.0	1.5e-150
WP_011054796.1|232532_233135_+	hypothetical protein	NA	A0A097PAX9	Streptococcus_pyogenes_phage	98.8	7.8e-91
WP_011054795.1|233145_233919_+	hypothetical protein	NA	A0A097PAV0	Streptococcus_pyogenes_phage	100.0	3.9e-135
WP_009880241.1|233928_234150_+	hypothetical protein	NA	A0A097PAX7	Streptococcus_pyogenes_phage	84.5	2.5e-18
WP_009880240.1|234149_234809_+	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	100.0	8.5e-123
WP_009880239.1|234930_235686_-	streptococcal pyrogenic exotoxin SpeA	NA	A0A097PAT7	Streptococcus_pyogenes_phage	100.0	2.2e-143
WP_011054793.1|235906_236089_+	hypothetical protein	NA	J7KBZ4	Streptococcus_phage	81.4	1.1e-19
WP_111677393.1|236279_237635_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	32.7	4.3e-73
>prophage 2
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	357824	427704	1838787	transposase,tRNA,protease	Enterococcus_phage(21.43%)	58	NA	NA
WP_111677345.1|357824_358601_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_111677044.1|358744_359878_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_172448859.1|360044_360785_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_002983967.1|360984_361647_+	ComEA family DNA-binding protein	NA	NA	NA	NA	NA
WP_111677344.1|361627_363850_+	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	59.4	9.1e-52
WP_111677343.1|363941_364982_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_002983977.1|365078_365684_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	53.2	1.8e-58
WP_111677342.1|366052_366301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011528765.1|366297_366888_+	serine hydrolase	NA	NA	NA	NA	NA
WP_011528764.1|367001_368222_-	DUF3114 domain-containing protein	NA	NA	NA	NA	NA
WP_111677341.1|368228_369257_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_111677340.1|369458_370163_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_111677339.1|370281_370998_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_111677338.1|371292_372255_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_085613985.1|372267_374073_+	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_111677337.1|374448_375645_+	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_002984000.1|375710_376418_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	27.2	2.0e-08
WP_111695131.1|376480_377536_+	peptidylprolyl isomerase PrsA	NA	NA	NA	NA	NA
WP_111677335.1|377922_380541_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.1	5.1e-62
WP_111677334.1|380900_381116_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011184659.1|381112_381874_+	DUF3169 family protein	NA	NA	NA	NA	NA
WP_111677333.1|381892_382588_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_111677332.1|383930_385244_-	chloride channel protein	NA	NA	NA	NA	NA
WP_011017933.1|385218_386178_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.2	1.8e-126
WP_111677331.1|386381_388541_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.6	4.7e-263
WP_002989242.1|388560_388779_-	redoxin NrdH	NA	A0A249XUR7	Enterococcus_phage	49.3	1.1e-13
WP_002984031.1|389171_389435_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_111695132.1|389439_391173_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_002984035.1|391357_392785_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002989254.1|394263_395349_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	1.6e-33
WP_002984060.1|395446_396073_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.7	2.2e-35
WP_002989257.1|396152_396416_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_002989260.1|396468_397278_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011017927.1|397422_397920_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_011184646.1|397919_399590_+	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	40.6	6.6e-47
WP_002992607.1|399674_399878_+	DUF3272 domain-containing protein	NA	NA	NA	NA	NA
WP_002984078.1|399852_400794_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA	NA
WP_111677329.1|400997_403376_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA	NA
WP_011054632.1|403912_405109_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	65.4	9.9e-138
WP_011054631.1|405282_406542_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_111677328.1|406899_407805_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002984095.1|408042_408585_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011054629.1|409892_410753_+	methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002984102.1|410754_411720_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_009880589.1|411830_413114_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_009880588.1|413106_413598_+	shikimate kinase	NA	NA	NA	NA	NA
WP_011284919.1|413805_415257_+	LCP family protein	NA	NA	NA	NA	NA
WP_111677326.1|415305_416694_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	98.0	1.7e-258
WP_002984115.1|417598_418000_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_111695133.1|418104_419589_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_011054623.1|419962_421183_+	MFS transporter	NA	NA	NA	NA	NA
WP_011017916.1|421302_421668_-	thioesterase family protein	NA	NA	NA	NA	NA
WP_011017915.1|421782_422514_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_011054622.1|422530_422854_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	46.9	6.1e-18
WP_032464791.1|422956_423142_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_111677324.1|423655_424966_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_002992869.1|425189_426062_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_172448842.1|426361_427704_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	49.8	1.4e-63
>prophage 3
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	443408	536082	1838787	transposase,tRNA,capsid,holin,head,terminase,portal,tail,integrase	Streptococcus_phage(37.7%)	105	462328:462387	502652:502729
WP_002987985.1|443408_444272_+|transposase	IS982-like element ISSpy2 family transposase	transposase	NA	NA	NA	NA
WP_002984200.1|444508_444652_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_012767157.1|444663_446202_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	28.1	3.5e-42
WP_111677319.1|446198_447455_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	NA	NA	NA	NA
WP_002984216.1|447472_447712_+	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA	NA
WP_111695134.1|447704_448955_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_111677318.1|448985_449969_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002984240.1|451442_452279_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_111695135.1|452278_453640_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_111695136.1|453913_455161_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002987985.1|455270_456134_+|transposase	IS982-like element ISSpy2 family transposase	transposase	NA	NA	NA	NA
WP_111695137.1|456373_457390_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.5	3.7e-16
WP_111695138.1|457504_458998_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_111677315.1|459032_461297_+	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
WP_002989605.1|461553_462174_-	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
462328:462387	attL	AAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGATTACTTACGGTAAGCATT	NA	NA	NA	NA
WP_002984265.1|462447_463536_-|integrase	site-specific integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	99.4	4.2e-204
WP_002984270.1|463785_464595_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	J7KDP1	Streptococcus_phage	35.8	3.8e-24
WP_111677314.1|464607_465444_-	helix-turn-helix transcriptional regulator	NA	A0A097PBE5	Streptococcus_pyogenes_phage	88.0	1.8e-125
WP_001104151.1|465799_465958_+	hypothetical protein	NA	J7KH24	Streptococcus_phage	92.3	3.4e-22
WP_011017887.1|466085_466769_-	DUF4145 domain-containing protein	NA	A0A1X9I5M7	Streptococcus_phage	59.4	1.2e-71
WP_002992770.1|466866_467067_+	helix-turn-helix transcriptional regulator	NA	A0A141E205	Streptococcus_phage	59.6	2.7e-08
WP_011017885.1|467176_467386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677313.1|467572_467779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984301.1|467915_468152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677312.1|468277_468463_+	helix-turn-helix transcriptional regulator	NA	J7KH19	Streptococcus_phage	68.9	4.6e-18
WP_111677311.1|468540_468837_+	MerR family transcriptional regulator	NA	A0A097PAT8	Streptococcus_pyogenes_phage	84.7	2.3e-43
WP_111677310.1|468983_469298_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN6	Streptococcus_phage	94.2	5.9e-50
WP_085613680.1|469311_470214_+	phage replisome organizer N-terminal domain-containing protein	NA	J7KBV5	Streptococcus_phage	87.5	3.0e-118
WP_172448841.1|471064_471202_+	hypothetical protein	NA	J7KBQ4	Streptococcus_phage	75.7	3.5e-07
WP_021341157.1|471212_471569_+	HTH domain-containing protein	NA	A0A097PAU3	Streptococcus_pyogenes_phage	99.2	3.0e-50
WP_111677309.1|471549_471804_+	hypothetical protein	NA	Q938N0	Temperate_phage	97.6	1.8e-41
WP_021341163.1|471824_472307_+	siphovirus Gp157 family protein	NA	Q938M9	Temperate_phage	98.8	1.6e-49
WP_111677308.1|472307_472982_+	ERF family protein	NA	Q938M8	Temperate_phage	97.3	2.0e-103
WP_111677307.1|472974_473394_+	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	97.1	3.1e-70
WP_011106686.1|473399_473603_+	hypothetical protein	NA	Q938M6	Temperate_phage	100.0	4.7e-32
WP_111677306.1|473602_474043_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A097PAS0	Streptococcus_pyogenes_phage	97.9	4.5e-80
WP_111677305.1|474039_474396_+	hypothetical protein	NA	A0A1P8VVP9	Streptococcus_phage	97.5	2.1e-59
WP_023078268.1|474637_474925_+	DUF1599 domain-containing protein	NA	J7KDH9	Streptococcus_phage	75.0	5.1e-32
WP_111677303.1|474908_475322_+	hypothetical protein	NA	Q938M1	Temperate_phage	62.4	4.6e-34
WP_011018135.1|475318_475489_+	hypothetical protein	NA	Q938M0	Temperate_phage	100.0	8.5e-11
WP_111677589.1|475485_475770_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	86.2	2.6e-36
WP_032465979.1|475774_475975_+	hypothetical protein	NA	A0A0E3T873	Gordonia_phage	45.3	4.6e-08
WP_111677302.1|475987_476389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002987471.1|476388_477024_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	67.9	5.5e-87
WP_111677301.1|477294_477735_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	97.3	7.2e-78
WP_111677300.1|478264_478735_+|terminase	terminase small subunit	terminase	A0A141E1Y3	Streptococcus_phage	72.8	1.5e-52
WP_111677299.1|478712_480020_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.2	5.9e-184
WP_111677298.1|480031_481534_+|portal	phage portal protein	portal	C9W9H5	Streptococcus_virus	54.3	4.1e-141
WP_002984371.1|481514_483140_+|head	phage head morphogenesis protein	head	U6E9F1	Streptococcus_phage	43.8	1.1e-46
WP_010922213.1|483130_483310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111677297.1|483369_483636_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	84.1	1.7e-34
WP_085577357.1|483770_484304_+	DUF4355 domain-containing protein	NA	A0A141E0S7	Streptococcus_phage	83.9	1.4e-14
WP_111677296.1|484313_484694_+|head	head decoration protein	head	A0A0K2CNR0	Brevibacillus_phage	37.1	5.8e-07
WP_002984388.1|484693_485770_+|capsid	major capsid protein	capsid	A0A2H4J022	uncultured_Caudovirales_phage	56.0	5.5e-103
WP_002984390.1|485779_486022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984392.1|486035_486389_+|head,tail	phage head-tail connector protein	head,tail	A0A2H4J002	uncultured_Caudovirales_phage	49.6	9.7e-25
WP_002984393.1|486385_486694_+	hypothetical protein	NA	A0A2P1JTW8	Anoxybacillus_phage	40.2	5.7e-13
WP_002984399.1|486674_487040_+	HK97 gp10 family phage protein	NA	A0A097BY98	Enterococcus_phage	46.3	7.7e-17
WP_002984401.1|487036_487426_+	hypothetical protein	NA	Q38611	Lactococcus_phage	68.2	3.5e-44
WP_164552684.1|487435_488083_+|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	52.0	1.4e-40
WP_002984405.1|488135_488495_+	hypothetical protein	NA	D7RWD6	Brochothrix_phage	44.5	4.3e-20
WP_002984407.1|488536_488866_+	hypothetical protein	NA	A0A1P8BLR3	Lactococcus_phage	41.5	2.0e-11
WP_047235256.1|488880_492147_+	tape measure protein	NA	U6E979	Streptococcus_phage	30.4	1.6e-04
WP_002984411.1|492178_492958_+|tail	phage tail family protein	tail	A3F655	Streptococcus_phage	55.5	1.9e-68
WP_111677295.1|492954_495006_+|tail	phage tail protein	tail	A3F656	Streptococcus_phage	84.6	0.0e+00
WP_047235257.1|495002_496010_+	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	71.7	1.4e-137
WP_111677294.1|496022_497933_+	gp58-like family protein	NA	Q938J9	Temperate_phage	67.8	1.3e-120
WP_002987333.1|497946_498108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111677293.1|498110_498728_+	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	89.3	2.7e-78
WP_002987582.1|498737_499013_+	hypothetical protein	NA	A7J2B2	Streptococcus_phage	100.0	2.6e-41
WP_003058873.1|499009_499237_+|holin	phage holin	holin	A7J2B3	Streptococcus_phage	100.0	2.0e-31
WP_111677292.1|499352_500558_+	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	84.3	1.7e-206
WP_011017966.1|500627_501062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172451419.1|501332_502133_-	streptodornase Sda3	NA	NA	NA	NA	NA
WP_002984426.1|502370_502559_+	hypothetical protein	NA	A3F673	Streptococcus_phage	83.1	1.3e-20
WP_002989607.1|503149_503764_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
502652:502729	attR	AAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGATTACTTACGGTAAGCATTGATGGAGCCGGTGGGAGT	NA	NA	NA	NA
WP_111677291.1|503890_504676_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002989617.1|505384_505756_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111677290.1|505940_509051_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.8	5.4e-119
WP_002984444.1|509130_510144_+	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_002984447.1|510206_511709_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_002984449.1|511926_512484_+	signal peptidase I	NA	NA	NA	NA	NA
WP_011284834.1|512659_514474_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.7	1.2e-97
WP_011528695.1|514669_515005_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_002984455.1|515111_515753_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_002984457.1|515762_516392_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.3e-27
WP_002984460.1|516407_517244_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_111677289.1|517612_518386_+	CAMP factor pore-forming toxin Cfa	NA	NA	NA	NA	NA
WP_111677288.1|518755_519991_-	cation diffusion facilitator family transporter	NA	NA	NA	NA	NA
WP_038433358.1|520110_521433_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_111677287.1|521962_524281_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.3	7.1e-132
WP_002984469.1|524643_524892_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002984470.1|524928_525540_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_111677286.1|525550_525739_+	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_002984475.1|525751_526291_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_111677285.1|526331_526532_+	CsbD family protein	NA	J7KJ36	Streptococcus_phage	51.5	2.3e-07
WP_172448840.1|526542_527031_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_002984480.1|527193_527835_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002984482.1|527977_528520_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111677283.1|528637_529339_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.5	1.7e-36
WP_111677282.1|529353_531990_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002993908.1|532081_532678_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011528685.1|532688_533645_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_023605124.1|533741_535082_+	DUF2130 domain-containing protein	NA	NA	NA	NA	NA
WP_002989678.1|535197_536082_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
>prophage 4
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	675578	784154	1838787	transposase,tRNA,capsid,holin,head,tail,portal,terminase,integrase	Streptococcus_phage(67.8%)	108	729558:729606	769804:769852
WP_111677233.1|675578_676562_+|transposase	IS30-like element IS1239 family transposase	transposase	H7BW61	unidentified_phage	34.6	1.0e-31
WP_003053708.1|676651_678028_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
WP_111677232.1|678095_679505_-	dipeptidase PepV	NA	NA	NA	NA	NA
WP_002989923.1|679629_680232_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_111677231.1|680416_682213_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_111677230.1|682314_683712_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_111677229.1|685659_687309_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.3	1.8e-12
WP_111677228.1|687444_688272_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_002984844.1|688268_689078_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_002989934.1|689094_689586_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_002989935.1|689604_690030_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_111677227.1|691384_691822_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_172451425.1|692007_693486_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_111677225.1|693641_695474_-	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	41.0	3.7e-19
WP_002984851.1|696304_696937_-	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_085634274.1|696936_697701_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_111677222.1|697700_698453_-	acyl-[acyl-carrier-protein] thioesterase	NA	NA	NA	NA	NA
WP_111677221.1|698462_699593_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_111677220.1|699655_700297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677219.1|700420_701776_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_002984857.1|701829_702786_-	YbbR-like domain-containing protein	NA	NA	NA	NA	NA
WP_002984858.1|702782_703634_-	TIGR00159 family protein	NA	NA	NA	NA	NA
WP_172448839.1|703735_705079_+	Mur ligase family protein	NA	NA	NA	NA	NA
WP_111677217.1|705078_705870_+	type 1 glutamine amidotransferase	NA	NA	NA	NA	NA
WP_038433460.1|705978_706968_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	25.6	2.8e-13
WP_111677216.1|707200_709618_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA	NA
WP_111677588.1|709827_709989_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_111677215.1|710292_712056_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.7	8.8e-34
WP_111695148.1|712382_713792_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
WP_111695193.1|713976_714975_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_049519307.1|715033_716002_-	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA	NA
WP_014407529.1|716286_718194_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.9	3.4e-55
WP_002989987.1|718239_718566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677213.1|718595_719381_-	esterase family protein	NA	NA	NA	NA	NA
WP_111677212.1|719513_721175_-	ribonuclease J	NA	NA	NA	NA	NA
WP_111677211.1|721378_722137_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	28.5	1.0e-10
WP_014407527.1|722133_723003_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_111677209.1|723347_724346_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_111677208.1|724699_726352_+	PavA family fibronectin-binding protein Fbp54	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	41.0	1.7e-07
WP_111677207.1|726410_727658_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_111677206.1|727647_728829_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002984880.1|728886_729363_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
729558:729606	attL	TTGATATGACAAGGTTCTTTAATGTTTTATTTAATCACTTCTTGAGTTT	NA	NA	NA	NA
WP_111677205.1|729966_730677_-	streptococcal pyrogenic exotoxin SpeH	NA	NA	NA	NA	NA
WP_080286815.1|730702_731380_-	streptococcal pyrogenic exotoxin SpeI	NA	A0A075M4C7	Staphylococcus_phage	32.0	1.2e-26
WP_038433469.1|731646_732399_-	SH3 domain-containing protein	NA	A3F665	Streptococcus_phage	96.8	1.0e-140
WP_021733507.1|732400_732733_-|holin	phage holin	holin	A3F664	Streptococcus_phage	98.2	2.8e-50
WP_021733504.1|732745_733066_-	hypothetical protein	NA	A3F663	Streptococcus_phage	99.1	1.2e-50
WP_038433470.1|733076_733688_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	91.1	8.8e-82
WP_002987333.1|733690_733852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038433471.1|733860_735879_-	gp58-like family protein	NA	Q938J9	Temperate_phage	58.8	3.9e-126
WP_038433249.1|735888_736998_-	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	71.3	1.3e-120
WP_038433248.1|736997_738980_-|tail	phage tail protein	tail	A7J2A7	Streptococcus_phage	93.9	0.0e+00
WP_111677204.1|738989_739832_-|tail	phage tail family protein	tail	A7J2A6	Streptococcus_phage	97.5	3.9e-157
WP_111677203.1|739843_744226_-	tape measure protein	NA	A7J2A5	Streptococcus_phage	74.0	1.3e-224
WP_011054867.1|744240_744474_-	hypothetical protein	NA	A7J2A4	Streptococcus_phage	97.4	6.4e-33
WP_023079225.1|744548_745004_-	phage protein	NA	A7J2A3	Streptococcus_phage	98.7	1.2e-75
WP_011054869.1|745057_745657_-|tail	phage major tail protein, TP901-1 family	tail	A7J2A2	Streptococcus_phage	97.1	1.7e-90
WP_011054870.1|745668_746028_-	hypothetical protein	NA	A7J2A1	Streptococcus_phage	98.3	1.2e-57
WP_011106640.1|746031_746376_-	HK97 gp10 family phage protein	NA	A7J2A0	Streptococcus_phage	98.2	5.1e-55
WP_011054872.1|746372_746651_-	hypothetical protein	NA	A7J299	Streptococcus_phage	100.0	1.9e-47
WP_011054873.1|746661_747018_-|head,tail	phage head-tail connector protein	head,tail	A7J298	Streptococcus_phage	100.0	4.6e-59
WP_002983429.1|747029_747917_-	hypothetical protein	NA	A7J297	Streptococcus_phage	100.0	2.1e-161
WP_011888933.1|747929_748499_-	DUF4355 domain-containing protein	NA	A7J296	Streptococcus_phage	100.0	1.9e-83
WP_011888934.1|748666_748933_-	hypothetical protein	NA	Q938K9	Temperate_phage	96.6	2.9e-37
WP_011054876.1|748937_749126_-	hypothetical protein	NA	A7J294	Streptococcus_phage	100.0	7.4e-24
WP_032465703.1|749153_750602_-|capsid	minor capsid protein	capsid	A7J293	Streptococcus_phage	99.8	1.2e-278
WP_038433243.1|750561_752094_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	99.8	4.5e-292
WP_038433241.1|752109_753387_-|terminase	PBSX family phage terminase large subunit	terminase	A7J291	Streptococcus_phage	99.8	3.1e-246
WP_011106637.1|753376_753829_-|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	100.0	6.9e-76
WP_011054881.1|753918_754335_-	transcriptional regulator	NA	A7J289	Streptococcus_phage	99.3	3.3e-72
WP_011054882.1|754467_754740_-	hypothetical protein	NA	A7J287	Streptococcus_phage	73.3	5.7e-25
WP_164972002.1|754732_754903_-	hypothetical protein	NA	A7J285	Streptococcus_phage	92.3	9.0e-21
WP_038433239.1|754903_756226_-	DEAD/DEAH box helicase family protein	NA	A7J284	Streptococcus_phage	97.7	5.1e-252
WP_015898615.1|756222_756498_-	VRR-NUC domain-containing protein	NA	A7J283	Streptococcus_phage	97.8	7.7e-46
WP_038433235.1|756883_759268_-	DNA primase	NA	A7J282	Streptococcus_phage	94.8	4.8e-277
WP_038433233.1|759272_761195_-	DNA polymerase	NA	A7J280	Streptococcus_phage	99.1	0.0e+00
WP_086934854.1|761237_761801_-	DUF2815 family protein	NA	D2J040	Enterococcus_phage	58.5	3.3e-51
WP_038433232.1|761809_762967_-	DUF2800 domain-containing protein	NA	A7J278	Streptococcus_phage	97.9	8.8e-216
WP_002988708.1|762966_763266_-	hypothetical protein	NA	A7J277	Streptococcus_phage	100.0	1.8e-43
WP_023611025.1|763354_763558_-	hypothetical protein	NA	A7J276	Streptococcus_phage	98.5	1.6e-32
WP_038433231.1|763554_763905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038433229.1|764048_764435_-	hypothetical protein	NA	A7J274	Streptococcus_phage	89.0	3.3e-58
WP_030127424.1|764431_764635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011888947.1|764627_764798_-	hypothetical protein	NA	A7J273	Streptococcus_phage	89.3	1.2e-20
WP_038433227.1|764799_765111_-	hypothetical protein	NA	A0A1S5SA25	Streptococcus_phage	80.4	8.2e-44
WP_011054585.1|765188_765374_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
WP_011284879.1|765540_765780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011285629.1|765921_766728_+	TIGR02391 family protein	NA	A0A1S5SBU1	Streptococcus_phage	82.1	7.9e-123
WP_038433225.1|766939_767155_-	hypothetical protein	NA	M1Q1B4	Streptococcus_phage	79.7	1.2e-25
WP_011888748.1|767462_767813_+	helix-turn-helix transcriptional regulator	NA	C5J980	Streptococcus_phage	62.6	1.1e-33
WP_011888747.1|767815_768202_+	hypothetical protein	NA	M1PFJ2	Streptococcus_phage	55.5	3.3e-34
WP_011285632.1|768213_768480_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
WP_011888953.1|768607_769747_+|integrase	site-specific integrase	integrase	A1EAB7	Streptococcus_phage	56.3	1.2e-119
WP_002984881.1|769829_770870_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.9	1.1e-68
769804:769852	attR	TTGATATGACAAGGTTCTTTAATGTTTTATTTAATCACTTCTTGAGTTT	NA	NA	NA	NA
WP_002990099.1|771113_771707_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	28.2	3.7e-08
WP_002992970.1|771706_772576_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	64.6	2.4e-101
WP_111695149.1|772633_773740_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_002984887.1|773779_774568_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_002990104.1|774557_775244_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_111677201.1|775315_775972_-	endonuclease III	NA	NA	NA	NA	NA
WP_011184446.1|775968_776652_-	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	36.8	2.2e-09
WP_002990109.1|776732_777251_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	42.4	3.9e-30
WP_111677200.1|777400_779611_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.2	6.6e-71
WP_111677199.1|779607_780372_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_009881223.1|780371_781301_-	ribonuclease Z	NA	NA	NA	NA	NA
WP_002990114.1|781315_781951_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_111677198.1|781943_783182_-	GTPase HflX	NA	NA	NA	NA	NA
WP_011184442.1|783254_784154_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
>prophage 5
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	878869	889472	1838787		Streptococcus_phage(57.14%)	9	NA	NA
WP_111677169.1|878869_880012_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	8.3e-25
WP_111677168.1|880246_880687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002990257.1|880716_881985_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_011017639.1|882072_883425_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.2	7.0e-31
WP_002985134.1|883645_883987_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	40.2	5.9e-19
WP_002990262.1|884047_885214_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
WP_002985140.1|885307_885994_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002985142.1|885990_887154_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_111677167.1|887261_889472_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.9	8.5e-268
>prophage 6
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	1117689	1176643	1838787	tRNA,protease,bacteriocin	Streptococcus_phage(33.33%)	60	NA	NA
WP_002990771.1|1117689_1117890_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_111677089.1|1117902_1118130_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002987564.1|1119353_1119536_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_002994504.1|1119550_1119796_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002985741.1|1120753_1121230_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_111677088.1|1121249_1122146_-	GTPase Era	NA	NA	NA	NA	NA
WP_002985746.1|1122265_1122673_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_002985748.1|1122653_1123151_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_111677087.1|1123309_1123885_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
WP_002985751.1|1123930_1124983_-	PhoH family protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
WP_111677086.1|1125141_1126914_-	oleate hydratase	NA	NA	NA	NA	NA
WP_111677085.1|1127227_1128397_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XB61	Gordonia_phage	40.5	5.5e-16
WP_002985757.1|1128552_1128768_-	YozE family protein	NA	NA	NA	NA	NA
WP_002985759.1|1128764_1129274_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_011889099.1|1129346_1130204_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002985763.1|1130312_1130870_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002985765.1|1130898_1131627_-	UMP kinase	NA	NA	NA	NA	NA
WP_002985768.1|1131951_1132641_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_111677084.1|1132746_1133172_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_010921962.1|1133415_1133769_+	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
WP_111677083.1|1133839_1136245_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
WP_111677082.1|1136461_1137268_+	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.9e-20
WP_002990814.1|1137414_1138269_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_021299377.1|1138269_1138995_-	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.1e-17
WP_111695164.1|1139058_1139991_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_021733524.1|1140136_1140784_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_111677081.1|1140882_1141224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011284562.1|1141374_1142070_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_002990826.1|1142089_1142341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002990829.1|1142340_1142895_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_111695165.1|1142928_1144311_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L4K9	Tupanvirus	36.0	8.5e-32
WP_002993065.1|1144483_1145821_-	MFS transporter	NA	NA	NA	NA	NA
WP_111674497.1|1146153_1147113_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_021340581.1|1147188_1147887_-	3-oxoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.2	1.2e-10
WP_111677079.1|1147879_1148116_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_111677078.1|1148475_1149132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111677077.1|1149400_1150099_+	streptococcal pyrogenic exotoxin SpeJ	NA	NA	NA	NA	NA
WP_111677076.1|1150400_1150733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677075.1|1151411_1152113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002995935.1|1152207_1152459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677576.1|1152646_1153099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677074.1|1153555_1154308_+	ADP-ribosyltransferase	NA	NA	NA	NA	NA
WP_111677073.1|1154511_1156692_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.2	9.5e-171
WP_002990870.1|1156658_1157147_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	R4JF54	Bacillus_phage	37.5	1.3e-11
WP_002995917.1|1157150_1158164_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	53.4	5.5e-97
WP_111677072.1|1158658_1160659_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	35.1	4.6e-87
WP_111695166.1|1160958_1161606_-	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_111677070.1|1162376_1167323_-|protease	CXC chemokine-degrading serine protease SpyCEP	protease	NA	NA	NA	NA
WP_021340507.1|1167588_1168770_-	L-lactate oxidase	NA	NA	NA	NA	NA
WP_111677069.1|1169003_1169831_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.3	5.8e-129
WP_014407341.1|1169904_1170261_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.0	1.8e-39
WP_111677068.1|1170558_1171188_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002985833.1|1171234_1171627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677067.1|1171653_1172517_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	74.3	1.9e-114
WP_002985838.1|1172521_1172845_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_111677066.1|1173248_1173488_-	Tpl protein	NA	NA	NA	NA	NA
WP_111695167.1|1173506_1174382_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	46.6	3.6e-68
WP_014635306.1|1174399_1175035_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.0e-65
WP_002985847.1|1175282_1175558_-	YlbG family protein	NA	NA	NA	NA	NA
WP_002985850.1|1176052_1176643_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	55.7	2.6e-54
>prophage 7
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	1535714	1546784	1838787	transposase	Synechococcus_phage(33.33%)	7	NA	NA
WP_010921776.1|1535714_1536839_+	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_002987985.1|1536934_1537798_+|transposase	IS982-like element ISSpy2 family transposase	transposase	NA	NA	NA	NA
WP_111676983.1|1537867_1539415_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	51.3	3.4e-45
WP_111676982.1|1539598_1540153_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	2.6e-24
WP_111676981.1|1540320_1541343_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	42.0	1.4e-63
WP_009880323.1|1541370_1542825_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
WP_111676980.1|1543058_1546784_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.4	3.0e-39
>prophage 8
NZ_LS483344	Streptococcus pyogenes strain NCTC12840 chromosome 1	1838787	1762711	1778430	1838787	tRNA	Streptococcus_phage(61.54%)	22	NA	NA
WP_014411911.1|1762711_1763503_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SE31	Streptococcus_phage	48.5	7.5e-09
WP_003045754.1|1763570_1763828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002992501.1|1763882_1764290_+	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
WP_111677541.1|1764303_1764921_+	Rha family transcriptional regulator	NA	A0A159B6D5	Gordonia_phage	38.8	2.2e-11
WP_023611295.1|1765154_1765496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023611263.1|1765482_1765704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922764.1|1765706_1765898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003058810.1|1765909_1766239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001100459.1|1766241_1766514_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
WP_010922767.1|1766514_1767372_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	74.8	4.5e-124
WP_002992487.1|1767340_1769029_+	DNA primase	NA	A0A1X9I717	Streptococcus_phage	82.1	2.5e-259
WP_000694577.1|1769315_1769489_+	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
WP_014407944.1|1769494_1769668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023611171.1|1769669_1770179_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.1e-29
WP_002992480.1|1770252_1770741_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
WP_032461242.1|1771139_1771502_+	DUF1492 domain-containing protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	1.3e-05
WP_111677542.1|1771476_1771860_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	41.7	3.7e-14
WP_111677543.1|1772060_1772723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002982175.1|1773119_1775675_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	23.4	3.0e-43
WP_111677544.1|1775661_1775868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111677545.1|1776010_1776448_-	arginine repressor	NA	NA	NA	NA	NA
WP_111677546.1|1776738_1778430_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.2	7.1e-73
