assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900475155.1_41975_A01	NZ_LS483359	Streptococcus pyogenes strain NCTC12068 chromosome 1	1	799204-799569	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas7,cas8c,cas5,DEDDh,csa3	Type II-C,Type II-B,Type II-A	GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC,GTTTTAGAGCTATGCTGTTTTGAATGGTC,GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC	36,29,36	0	0	NA	NA	II-A:II-A:II-A	4,5,5	5	TypeII-C,TypeII-B,TypeII-A	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas7,cas8c,cas5,DEDDh,csa3	NA|214aa|up_8|NZ_LS483359.1_788663_789305_+,NA	NA|452aa|up_9|NZ_LS483359.1_787184_788540_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|214aa|up_8|NZ_LS483359.1_788663_789305_+	NA	NA|377aa|up_7|NZ_LS483359.1_789367_790498_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|251aa|up_6|NZ_LS483359.1_790507_791260_+	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|255aa|up_5|NZ_LS483359.1_791259_792024_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|211aa|up_4|NZ_LS483359.1_792023_792656_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1369aa|up_3|NZ_LS483359.1_793135_797242_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|290aa|up_2|NZ_LS483359.1_797241_798111_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|114aa|up_1|NZ_LS483359.1_798107_798449_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|221aa|up_0|NZ_LS483359.1_798438_799101_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|611aa|down_0|NZ_LS483359.1_800211_802044_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|469aa|down_1|NZ_LS483359.1_802232_803639_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|146aa|down_2|NZ_LS483359.1_803824_804262_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|340aa|down_3|NZ_LS483359.1_804391_805411_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|142aa|down_4|NZ_LS483359.1_805617_806043_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|164aa|down_5|NZ_LS483359.1_806061_806553_+	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|270aa|down_6|NZ_LS483359.1_806569_807379_+	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|276aa|down_7|NZ_LS483359.1_807375_808203_+	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|550aa|down_8|NZ_LS483359.1_808338_809988_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|263aa|down_9|NZ_LS483359.1_809991_810780_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]
GCF_900475155.1_41975_A01	NZ_LS483359	Streptococcus pyogenes strain NCTC12068 chromosome 1	2	1191591-1192089	2,2,2	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas7,cas8c,cas5,cas3	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas7,cas8c,cas5,DEDDh,csa3	Type I-U,Type I-C, Type I-U?	TATTTCAATCCACTCACCCATGAAGGGTGAGAC,ATTTCAATCCACTCACCCATGAAGGGTGAGAC,TTTCAATCCACTCACCCATGAAGGGTGAGAC	33,32,31	0	0	NA	NA	I-C:I-C:I-C	7,7,7	7	TypeI-U,TypeI-C,TypeI-U?	cas3,DinG,csm6,cas9,cas1,cas2,csn2,cas7,cas8c,cas5,DEDDh,csa3	NA,NA	NA|412aa|up_9|NZ_LS483359.1_1181526_1182762_-	PRK01388, PRK01388, arginine deiminase; Provisional	NA|227aa|up_8|NZ_LS483359.1_1183035_1183716_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|158aa|up_7|NZ_LS483359.1_1183857_1184331_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|239aa|up_6|NZ_LS483359.1_1184496_1185213_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|360aa|up_5|NZ_LS483359.1_1185226_1186306_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_4|NZ_LS483359.1_1186378_1188112_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|247aa|up_3|NZ_LS483359.1_1188108_1188849_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|369aa|up_2|NZ_LS483359.1_1188936_1190043_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_1|NZ_LS483359.1_1190085_1190709_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_0|NZ_LS483359.1_1190721_1191432_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	cas2|98aa|down_0|NZ_LS483359.1_1192237_1192531_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|NZ_LS483359.1_1192541_1193567_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas7|283aa|down_2|NZ_LS483359.1_1194240_1195089_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|632aa|down_3|NZ_LS483359.1_1195093_1196989_-	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas5|243aa|down_4|NZ_LS483359.1_1196988_1197717_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|803aa|down_5|NZ_LS483359.1_1197849_1200258_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|883aa|down_6|NZ_LS483359.1_1200411_1203060_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|188aa|down_7|NZ_LS483359.1_1203061_1203625_-	pfam13238, AAA_18, AAA domain	NA|132aa|down_8|NZ_LS483359.1_1204225_1204621_-	PRK07758, PRK07758, hypothetical protein; Provisional	NA|85aa|down_9|NZ_LS483359.1_1204638_1204893_-	pfam08930, DUF1912, Domain of unknown function (DUF1912)
