assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900475255.1_42545_F02	NZ_LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 chromosome 1	1	993315-993548	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,csa3,DinG	Type II-A,Type II-C,Type II-B	GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC,GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAA,GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC	36,33,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	2,3,3	3	TypeII-A,TypeII-C,TypeII-B	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,csa3,DinG	NA|214aa|up_8|NZ_LS483363.1_982772_983414_+,NA	NA|452aa|up_9|NZ_LS483363.1_981293_982649_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|214aa|up_8|NZ_LS483363.1_982772_983414_+	NA	NA|377aa|up_7|NZ_LS483363.1_983475_984606_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|251aa|up_6|NZ_LS483363.1_984615_985368_+	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|255aa|up_5|NZ_LS483363.1_985367_986132_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|210aa|up_4|NZ_LS483363.1_986131_986761_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1372aa|up_3|NZ_LS483363.1_987237_991353_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|290aa|up_2|NZ_LS483363.1_991352_992222_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_LS483363.1_992218_992560_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|221aa|up_0|NZ_LS483363.1_992549_993212_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|153aa|down_0|NZ_LS483363.1_993663_994122_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_1|NZ_LS483363.1_994191_996024_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|146aa|down_2|NZ_LS483363.1_996199_996637_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|217aa|down_3|NZ_LS483363.1_996649_997300_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|77aa|down_4|NZ_LS483363.1_997507_997738_+	pfam01721, Bacteriocin_II, Class II bacteriocin	NA|99aa|down_5|NZ_LS483363.1_997737_998034_+	pfam08951, EntA_Immun, Enterocin A Immunity	NA|390aa|down_6|NZ_LS483363.1_998223_999393_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|340aa|down_7|NZ_LS483363.1_999503_1000523_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|142aa|down_8|NZ_LS483363.1_1000729_1001155_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|164aa|down_9|NZ_LS483363.1_1001174_1001666_+	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]
GCF_900475255.1_42545_F02	NZ_LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 chromosome 1	2	1805263-1805340	2	CRISPRCasFinder	no		cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,csa3,DinG	Orphan	ACCACTCGCTCTTTGTCTCTAGGCTC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas9,cas1,cas2,csn2,csm6,csa3,DinG	NA,NA	NA|167aa|up_9|NZ_LS483363.1_1795696_1796197_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|411aa|up_8|NZ_LS483363.1_1796198_1797431_-	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II	NA|245aa|up_7|NZ_LS483363.1_1797445_1798180_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|307aa|up_6|NZ_LS483363.1_1798191_1799112_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|324aa|up_5|NZ_LS483363.1_1799136_1800108_-	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II	NA|75aa|up_4|NZ_LS483363.1_1800306_1800531_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|325aa|up_3|NZ_LS483363.1_1800591_1801566_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|145aa|up_2|NZ_LS483363.1_1801566_1802001_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|264aa|up_1|NZ_LS483363.1_1802077_1802869_-	PRK07260, PRK07260, enoyl-CoA hydratase; Provisional	NA|379aa|up_0|NZ_LS483363.1_1803090_1804227_-	PRK14276, PRK14276, chaperone protein DnaJ; Provisional	NA|609aa|down_0|NZ_LS483363.1_1805368_1807195_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|181aa|down_1|NZ_LS483363.1_1807312_1807855_-	PRK14156, PRK14156, heat shock protein GrpE; Provisional	NA|345aa|down_2|NZ_LS483363.1_1807896_1808931_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|190aa|down_3|NZ_LS483363.1_1809065_1809635_-	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]	NA|248aa|down_4|NZ_LS483363.1_1809631_1810375_-	COG1876, VanY, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|236aa|down_5|NZ_LS483363.1_1810364_1811072_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|79aa|down_6|NZ_LS483363.1_1811378_1811615_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|314aa|down_7|NZ_LS483363.1_1811685_1812627_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|480aa|down_8|NZ_LS483363.1_1812850_1814290_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|489aa|down_9|NZ_LS483363.1_1814289_1815756_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
