The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	36641	48954	1846983		Synechococcus_phage(28.57%)	8	NA	NA
WP_111704861.1|36641_40367_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.3	9.2e-41
WP_111704862.1|40527_41982_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.4e-53
WP_111704863.1|42009_43032_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.7	5.2e-63
WP_009880321.1|43199_43754_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	5.2e-25
WP_111704864.1|43937_45485_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	4.4e-45
WP_010921776.1|45542_46667_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_032463118.1|46919_48185_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_111704865.1|48462_48954_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	2.5e-18
>prophage 2
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	90224	105445	1846983	integrase,tRNA,holin	Streptococcus_phage(60.0%)	24	83484:83498	100224:100238
83484:83498	attL	TTTATCAAAAACACA	NA	NA	NA	NA
WP_111705314.1|90224_91370_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	49.7	5.6e-98
WP_110410861.1|91702_91846_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_017647425.1|92734_93382_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	28.1	2.6e-15
WP_011529102.1|93547_93745_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	72.3	3.7e-18
WP_111704867.1|93758_94367_+	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	47.4	8.0e-43
WP_011185070.1|94387_94795_+	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	68.7	8.5e-49
WP_023080068.1|94808_95426_+	Rha family transcriptional regulator	NA	A0A159B6D5	Gordonia_phage	38.8	2.2e-11
WP_002992497.1|95670_96003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922763.1|95999_96221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704868.1|96223_96415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000206026.1|96427_96790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704869.1|96786_97116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704870.1|97118_97391_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	4.7e-19
WP_111704871.1|97391_98258_+	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	73.1	3.6e-121
WP_111704872.1|98269_99664_+	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
WP_111704873.1|99956_100211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_068791229.1|100207_100381_+	DUF2758 domain-containing protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	8.6e-11
100224:100238	attR	TTTATCAAAAACACA	NA	NA	NA	NA
WP_168389151.1|100386_100560_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704874.1|100561_101071_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	61.5	1.2e-28
WP_002992480.1|101145_101634_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
WP_002992136.1|102038_102401_+	DUF1492 domain-containing protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	8.7e-05
WP_111704875.1|102375_102759_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	41.7	7.6e-15
WP_111704876.1|102959_103916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111704877.1|104185_105445_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	40.7	1.5e-72
>prophage 3
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	983143	1074391	1846983	holin,transposase,tRNA,capsid,integrase,protease,portal,head,tail	Streptococcus_phage(45.0%)	88	1002868:1002916	1027876:1027924
WP_111705325.1|983143_983287_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_111705084.1|983590_985366_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.5	8.9e-34
WP_030127493.1|985692_987102_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
WP_002989981.1|987286_988285_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_002989983.1|988343_989312_-	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA	NA
WP_111705086.1|989596_991504_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.1	2.6e-55
WP_111693154.1|991549_991876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023613217.1|991905_992691_-	esterase family protein	NA	NA	NA	NA	NA
WP_002991979.1|992823_994485_-	ribonuclease J	NA	NA	NA	NA	NA
WP_011017707.1|994688_995447_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	28.3	5.9e-11
WP_002991975.1|995443_996313_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_032462946.1|996657_997656_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_111705087.1|998009_999662_+	PavA family fibronectin-binding protein Fbp54	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	41.0	1.3e-07
WP_111705088.1|999720_1000968_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011284730.1|1000957_1002139_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002984880.1|1002196_1002673_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
1002868:1002916	attL	TTGATATGACAAGGTTCTTTAATGTTTTATTTAATCACTTCTTGAGTTT	NA	NA	NA	NA
WP_012560660.1|1003276_1003987_-	streptococcal pyrogenic exotoxin SpeH	NA	NA	NA	NA	NA
WP_111705089.1|1004192_1004480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002993615.1|1004645_1005398_-	SH3 domain-containing protein	NA	A3F665	Streptococcus_phage	96.8	7.9e-141
WP_002986151.1|1005515_1005971_-|holin	phage holin family protein	holin	A0A0M4R3G6	Streptococcus_phage	80.8	8.9e-63
WP_023611485.1|1005986_1006592_-	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	93.0	1.9e-84
WP_111705090.1|1006594_1007023_-	DUF1617 family protein	NA	A3F661	Streptococcus_phage	92.2	1.1e-67
WP_111705091.1|1007034_1008939_-	gp58-like family protein	NA	Q938J9	Temperate_phage	84.0	4.3e-212
WP_111705092.1|1008953_1009967_-	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	97.6	8.9e-180
WP_111705093.1|1009963_1012108_-|tail	phage tail protein	tail	Q938K1	Temperate_phage	95.4	0.0e+00
WP_014411854.1|1012104_1012812_-|tail	phage tail family protein	tail	Q938K2	Temperate_phage	71.1	1.7e-92
WP_111705094.1|1012811_1016735_-|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	49.6	8.3e-250
WP_002985341.1|1016747_1016915_-	hypothetical protein	NA	J7KBS0	Streptococcus_phage	89.1	2.2e-19
WP_085613669.1|1016944_1017271_-	hypothetical protein	NA	J7KK85	Streptococcus_phage	75.9	1.3e-39
WP_111705095.1|1017323_1017935_-|tail	phage tail protein	tail	J7KKC8	Streptococcus_phage	76.8	2.0e-78
WP_085613671.1|1017950_1018376_-	hypothetical protein	NA	J7KBZ9	Streptococcus_phage	85.1	2.9e-68
WP_111705096.1|1018477_1019611_+|transposase	ISAs1-like element IS1548 family transposase	transposase	NA	NA	NA	NA
WP_085613672.1|1019698_1020076_-	HK97 gp10 family phage protein	NA	J7KDM3	Streptococcus_phage	73.6	1.8e-45
WP_111705098.1|1020072_1020420_-|head	phage head closure protein	head	J7KJ42	Streptococcus_phage	87.3	1.9e-49
WP_063812171.1|1020416_1020719_-|head,tail	phage head-tail connector protein	head,tail	J7KC36	Streptococcus_phage	88.8	5.7e-42
WP_085613673.1|1020863_1022048_-|capsid	phage major capsid protein	capsid	J7KJ82	Streptococcus_phage	74.6	5.3e-160
WP_109981982.1|1022072_1022738_-|protease	Clp protease ClpP	protease	M1Q115	Streptococcus_phage	77.7	6.0e-92
WP_111705099.1|1022715_1023936_-|portal	phage portal protein	portal	J7KDU3	Streptococcus_phage	81.7	5.8e-186
WP_111705100.1|1024035_1024815_+	hypothetical protein	NA	A0A1S5S7L0	Streptococcus_phage	52.0	2.4e-44
WP_111705101.1|1024948_1025107_-	hypothetical protein	NA	J7KH24	Streptococcus_phage	84.6	1.8e-18
WP_002985417.1|1025466_1026231_+	helix-turn-helix transcriptional regulator	NA	E8ZDN4	Streptococcus_phage	64.5	2.0e-83
WP_002985420.1|1026240_1026546_+	membrane protein	NA	NA	NA	NA	NA
WP_002990094.1|1026668_1027808_+|integrase	site-specific integrase	integrase	A1EAB7	Streptococcus_phage	56.3	3.4e-119
WP_023079218.1|1027901_1028942_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.9	2.5e-68
1027876:1027924	attR	TTGATATGACAAGGTTCTTTAATGTTTTATTTAATCACTTCTTGAGTTT	NA	NA	NA	NA
WP_002990099.1|1029185_1029779_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	28.2	3.7e-08
WP_111705102.1|1029778_1030648_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	63.9	4.6e-100
WP_023610975.1|1030705_1031812_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_111705103.1|1031851_1032640_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_002984888.1|1032629_1033316_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_009880671.1|1033387_1034044_-	endonuclease III	NA	NA	NA	NA	NA
WP_002984890.1|1034040_1034724_-	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	36.8	2.9e-09
WP_002990109.1|1034804_1035323_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	42.4	3.9e-30
WP_111705104.1|1035472_1037683_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.2	3.0e-71
WP_002984893.1|1037679_1038444_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002984894.1|1038443_1039373_-	ribonuclease Z	NA	NA	NA	NA	NA
WP_002990114.1|1039387_1040023_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_111705105.1|1040015_1041254_-	GTPase HflX	NA	NA	NA	NA	NA
WP_002984897.1|1041326_1042226_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002984898.1|1042359_1042536_+	DUF3042 family protein	NA	NA	NA	NA	NA
WP_011054393.1|1042653_1043562_-	TDT family transporter	NA	NA	NA	NA	NA
WP_032464965.1|1043799_1044219_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010922187.1|1044529_1045516_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_111705106.1|1045711_1045999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002984905.1|1046560_1047766_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_111705107.1|1048156_1048387_-	DUF2969 domain-containing protein	NA	NA	NA	NA	NA
WP_111704682.1|1048450_1049518_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
WP_111705108.1|1049595_1052055_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	33.1	1.4e-98
WP_168390571.1|1052145_1054095_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.0	7.3e-122
WP_002984911.1|1054229_1054871_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_011285490.1|1054928_1056197_-	dihydroorotase	NA	NA	NA	NA	NA
WP_009880722.1|1056328_1056982_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	40.5	8.0e-41
WP_003061805.1|1057114_1057765_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_012560627.1|1057793_1058657_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_111703331.1|1058774_1060229_-	amidase	NA	NA	NA	NA	NA
WP_002990137.1|1060425_1061055_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_012560625.1|1061112_1061805_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_111705109.1|1062081_1062618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002984924.1|1062839_1063745_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111705110.1|1063824_1064613_-	LytR family transcriptional regulator	NA	NA	NA	NA	NA
WP_111705326.1|1064605_1065319_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_009880955.1|1065903_1066713_-	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	42.2	8.7e-53
WP_002990151.1|1066696_1067137_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	55.3	5.8e-35
WP_002990153.1|1067155_1068367_-	phosphopentomutase	NA	NA	NA	NA	NA
WP_111705111.1|1068443_1069127_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_111705112.1|1069504_1071604_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.4	3.9e-121
WP_002984942.1|1071661_1072405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075340169.1|1072552_1073152_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_002984948.1|1073161_1074391_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.5	7.8e-138
>prophage 4
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	1134119	1144722	1846983		Streptococcus_phage(57.14%)	9	NA	NA
WP_002992654.1|1134119_1135262_-	cysteine desulfurase	NA	H7BUW1	unidentified_phage	31.7	7.8e-15
WP_002992651.1|1135496_1135937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032464289.1|1135966_1137235_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_032464288.1|1137322_1138675_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	23.8	1.3e-29
WP_002985134.1|1138895_1139237_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	40.2	5.9e-19
WP_032464287.1|1139297_1140464_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.5	2.9e-33
WP_002985140.1|1140557_1141244_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_032464286.1|1141240_1142404_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.4	5.3e-144
WP_011054348.1|1142511_1144722_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
>prophage 5
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	1180121	1271218	1846983	tRNA,terminase,capsid,integrase,protease,portal,tail	Temperate_phage(43.33%)	92	1171295:1171310	1270581:1270596
1171295:1171310	attL	TTGTTCTTGAAGAAAC	NA	NA	NA	NA
WP_111705127.1|1180121_1182527_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003057440.1|1182736_1183780_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.3	4.6e-30
WP_002985226.1|1184962_1185151_-	DNA-directed RNA polymerase subunit beta	NA	NA	NA	NA	NA
WP_002990414.1|1185154_1186426_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_002994426.1|1186490_1186748_-	DUF1146 domain-containing protein	NA	NA	NA	NA	NA
WP_002985233.1|1187013_1187430_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_002985235.1|1187442_1188849_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_002985236.1|1189015_1189891_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_111705128.1|1189906_1191415_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_002990418.1|1191430_1191967_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_002985242.1|1191966_1192461_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_002985244.1|1192478_1193195_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_002985249.1|1193229_1193427_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_011017609.1|1193818_1194841_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	27.9	3.6e-19
WP_111705129.1|1194854_1196813_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	35.1	4.5e-103
WP_002985256.1|1197006_1197507_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	31.8	5.4e-05
WP_111705130.1|1197785_1200518_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002985264.1|1201089_1202208_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_110002808.1|1202204_1203332_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002990429.1|1203340_1204264_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	38.1	6.7e-33
WP_023078816.1|1204286_1204970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002994083.1|1204966_1205638_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_111705131.1|1205612_1206971_-	YcaO-like family protein	NA	NA	NA	NA	NA
WP_002990436.1|1206990_1208049_-	streptolysin associated protein SagC	NA	NA	NA	NA	NA
WP_010922108.1|1208045_1208996_-	streptolysin S biosynthesis dehydrogenase SagB	NA	NA	NA	NA	NA
WP_002985285.1|1209217_1209379_-	TOMM family cytolysin streptolysin S	NA	NA	NA	NA	NA
WP_172453577.1|1210243_1216909_-	DUF1542 domain-containing protein	NA	NA	NA	NA	NA
WP_111704710.1|1217380_1218922_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002985288.1|1220699_1222007_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	96.6	1.2e-240
WP_020905037.1|1222239_1222698_+	YueI family protein	NA	W6LLD2	Streptococcus_phage	39.1	3.9e-18
WP_111705132.1|1222829_1224554_-	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_111705133.1|1224921_1226874_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	46.3	6.8e-144
WP_002985295.1|1226874_1227444_-	hydrolase	NA	NA	NA	NA	NA
WP_065361223.1|1228276_1228456_-	Paratox	NA	A3F673	Streptococcus_phage	79.3	5.2e-19
WP_065358777.1|1228694_1229876_+	streptodornase Sda1	NA	A7J2B8	Streptococcus_phage	50.6	6.7e-78
WP_048327804.1|1229988_1230825_-	hypothetical protein	NA	Q938J2	Temperate_phage	47.3	1.8e-53
WP_048327805.1|1230828_1231371_-	DUF4065 domain-containing protein	NA	Q938J3	Temperate_phage	49.4	5.4e-43
WP_065358779.1|1231524_1232277_-	SH3 domain-containing protein	NA	A3F665	Streptococcus_phage	98.0	9.9e-144
WP_002988802.1|1232393_1232579_-	hypothetical protein	NA	Q938J5	Temperate_phage	93.4	9.5e-24
WP_002988799.1|1232575_1232875_-	hypothetical protein	NA	Q938J6	Temperate_phage	82.3	3.5e-36
WP_065358780.1|1232885_1233497_-	hypothetical protein	NA	A7J2B1	Streptococcus_phage	88.7	2.2e-80
WP_002988795.1|1233499_1233661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111705134.1|1233669_1235577_-	gp58-like family protein	NA	Q938J9	Temperate_phage	61.1	5.3e-133
WP_111705135.1|1235585_1236236_-	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	82.5	9.3e-98
WP_111705136.1|1236235_1237276_-	hyaluronoglucosaminidase	NA	A3F657	Streptococcus_phage	69.5	6.5e-85
WP_111705137.1|1237272_1239420_-|tail	phage tail protein	tail	Q938K1	Temperate_phage	91.1	0.0e+00
WP_065361218.1|1239416_1240133_-|tail	phage tail protein	tail	Q938K2	Temperate_phage	92.9	1.5e-128
WP_065361217.1|1240132_1243390_-	tape measure protein	NA	Q938K3	Temperate_phage	95.7	0.0e+00
WP_065361216.1|1243379_1243961_-	hypothetical protein	NA	Q938K4	Temperate_phage	71.0	3.6e-77
WP_030127689.1|1243969_1244404_-	hypothetical protein	NA	Q938K5	Temperate_phage	75.7	2.3e-52
WP_030127725.1|1244449_1244935_-	hypothetical protein	NA	Q938K6	Temperate_phage	83.1	5.2e-69
WP_030127726.1|1244934_1245333_-|capsid	phage capsid protein	capsid	Q79S87	Temperate_phage	98.5	7.2e-69
WP_065361215.1|1245329_1245686_-|capsid	capsid protein	capsid	Q79S88	Temperate_phage	99.2	4.5e-62
WP_030127753.1|1245685_1246018_-	hypothetical protein	NA	Q79S86	Temperate_phage	94.5	4.5e-56
WP_030127695.1|1246007_1246424_-	hypothetical protein	NA	Q938K7	Temperate_phage	91.0	2.2e-52
WP_010922080.1|1246477_1247296_-|capsid	N4-gp56 family major capsid protein	capsid	Q79S85	Temperate_phage	100.0	4.0e-146
WP_065361214.1|1247299_1247908_-	hypothetical protein	NA	Q938K8	Temperate_phage	93.6	9.9e-94
WP_065361213.1|1248124_1248394_-	hypothetical protein	NA	Q938K9	Temperate_phage	84.1	8.1e-32
WP_065361212.1|1248455_1248695_-	hypothetical protein	NA	Q938L0	Temperate_phage	94.9	3.5e-34
WP_065361211.1|1248666_1250145_-|capsid	phage minor capsid protein	capsid	Q938L1	Temperate_phage	93.3	3.6e-254
WP_076636814.1|1250149_1251652_-|portal	phage portal protein	portal	Q938L2	Temperate_phage	97.0	1.3e-275
WP_111705332.1|1251665_1252916_-|terminase	PBSX family phage terminase large subunit	terminase	Q938L3	Temperate_phage	97.3	3.4e-221
WP_030126039.1|1252954_1253668_-|terminase	terminase	terminase	A0A2H4J4R0	uncultured_Caudovirales_phage	34.5	2.6e-29
WP_081281265.1|1253738_1254611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065361210.1|1255644_1256082_-	DUF1492 domain-containing protein	NA	A0A097PBF1	Streptococcus_pyogenes_phage	99.3	1.0e-76
WP_171841612.1|1256441_1256606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065361209.1|1256602_1257166_-	DUF1642 domain-containing protein	NA	Q938L9	Temperate_phage	35.6	4.5e-16
WP_065361208.1|1257268_1257508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065361207.1|1257509_1257737_-	hypothetical protein	NA	A3F630	Streptococcus_phage	90.7	2.6e-31
WP_065361206.1|1257784_1258534_-	site-specific DNA-methyltransferase	NA	Q9MCL7	Streptococcus_virus	88.7	4.3e-131
WP_065361205.1|1258536_1258821_-	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	91.5	2.5e-39
WP_065361204.1|1258807_1259101_-	DUF3310 domain-containing protein	NA	Q938M3	Temperate_phage	100.0	1.4e-48
WP_111705138.1|1259094_1259346_-	hypothetical protein	NA	Q938M4	Temperate_phage	97.6	4.4e-40
WP_065361202.1|1259342_1259699_-	hypothetical protein	NA	A0A1P8VVP9	Streptococcus_phage	86.4	1.1e-52
WP_011527548.1|1259682_1260003_-	VRR-NUC domain-containing protein	NA	A0A1P8VVL5	Streptococcus_phage	95.3	1.9e-51
WP_048327832.1|1260238_1261720_-	DNA primase	NA	A0A1P8VVM0	Streptococcus_phage	87.0	1.9e-255
WP_065361201.1|1261709_1262522_-	bifunctional DNA primase/polymerase	NA	J7KH42	Streptococcus_phage	97.8	3.3e-153
WP_011527544.1|1262524_1262983_-	DUF669 domain-containing protein	NA	A0A1P8VVN0	Streptococcus_phage	94.1	2.2e-77
WP_065361200.1|1262998_1264228_-	DEAD/DEAH box helicase	NA	J7KK96	Streptococcus_phage	94.9	1.6e-228
WP_065361199.1|1264329_1265022_-	AAA family ATPase	NA	J7KC09	Streptococcus_phage	95.7	1.0e-126
WP_048327836.1|1265008_1265320_-	hypothetical protein	NA	A0A1S5PRW6	Streptococcus_phage	49.5	1.8e-22
WP_008087492.1|1265429_1265612_-	hypothetical protein	NA	A0A2P0ZLA4	Lactobacillus_phage	43.8	4.0e-06
WP_048327837.1|1265599_1265812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164492191.1|1265821_1265965_-	hypothetical protein	NA	A0A1P8VVR9	Streptococcus_phage	83.7	3.4e-13
WP_023612302.1|1265948_1266179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023612341.1|1266276_1266495_-	helix-turn-helix transcriptional regulator	NA	A0A1P8VVR5	Streptococcus_phage	97.2	5.9e-33
WP_023611288.1|1266682_1267042_+	helix-turn-helix transcriptional regulator	NA	A0A1P8VVN3	Streptococcus_phage	95.0	1.7e-56
WP_030126053.1|1267025_1267403_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A1P8VVK5	Streptococcus_phage	77.6	1.6e-54
WP_023612337.1|1267413_1267935_+	hypothetical protein	NA	Q938N8	Temperate_phage	97.7	7.5e-66
WP_065361198.1|1268053_1269130_+|integrase	site-specific integrase	integrase	Q0R5B4	Streptococcus_phage	41.5	1.5e-68
WP_002985298.1|1269493_1269841_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_111705139.1|1269955_1271218_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	50.8	6.4e-95
1270581:1270596	attR	GTTTCTTCAAGAACAA	NA	NA	NA	NA
>prophage 6
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	1393110	1428877	1846983	tRNA,bacteriocin,transposase	Bacillus_phage(27.27%)	35	NA	NA
WP_047235200.1|1393110_1395054_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	38.7	1.0e-120
WP_002985676.1|1395475_1396810_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_002985678.1|1396811_1397810_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_002985680.1|1397939_1398941_-	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	28.5	6.1e-24
WP_011054264.1|1399114_1400200_+	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_111705170.1|1400248_1400914_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002985686.1|1400924_1401302_+	VOC family protein	NA	NA	NA	NA	NA
WP_023079867.1|1401446_1402373_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	47.2	2.2e-76
WP_002990714.1|1402583_1403267_+	DUF969 domain-containing protein	NA	NA	NA	NA	NA
WP_002985692.1|1403266_1404193_+	DUF979 domain-containing protein	NA	NA	NA	NA	NA
WP_023611579.1|1404242_1404890_+	pyroglutamyl-peptidase I	NA	NA	NA	NA	NA
WP_010921981.1|1405008_1405728_-	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA	NA
WP_111705171.1|1405733_1406201_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	56.8	4.4e-41
WP_111705172.1|1406203_1408537_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.8	6.7e-90
WP_002985700.1|1408631_1408868_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_002990729.1|1408913_1409060_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_111705173.1|1409056_1410250_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_111705174.1|1410371_1411874_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	42.1	6.1e-76
WP_002994141.1|1412063_1412657_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_111705175.1|1412653_1413481_-	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	27.5	5.1e-16
WP_021299215.1|1413651_1414518_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_128650799.1|1414606_1414675_+	peptide pheromone SHP2	NA	NA	NA	NA	NA
WP_023605037.1|1415588_1415858_+	quorum-sensing system protein StcA	NA	NA	NA	NA	NA
WP_032464238.1|1416205_1416604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_111705177.1|1416696_1417767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032465693.1|1417984_1418419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002985729.1|1419433_1419634_-|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_002992018.1|1419646_1419874_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_020833322.1|1420160_1422314_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.3	5.7e-43
WP_014635340.1|1422324_1423689_+|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_011017462.1|1423765_1423891_+|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014635339.1|1424038_1425373_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_002992578.1|1425373_1426123_-	response regulator transcription factor	NA	A0A1V0E029	Clostridioides_phage	28.0	2.1e-21
WP_111705178.1|1426357_1427851_-|transposase	IS1182 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	91.9	2.5e-255
WP_111705180.1|1428580_1428877_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.5	9.3e-05
>prophage 7
NZ_LS483384	Streptococcus pyogenes strain NCTC13743 chromosome 1	1846983	1485693	1491728	1846983		Streptococcus_phage(100.0%)	9	NA	NA
WP_030127153.1|1485693_1486521_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.9	1.7e-128
WP_011184219.1|1486594_1486951_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
WP_009880724.1|1487250_1487880_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_111705199.1|1487926_1488319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020833286.1|1488345_1489209_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	74.7	2.2e-115
WP_002985838.1|1489213_1489537_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_111705200.1|1489941_1490181_-	Tpl protein	NA	NA	NA	NA	NA
WP_111705201.1|1490199_1491075_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.6	5.3e-72
WP_111705202.1|1491092_1491728_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	7.0e-66
