assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_900475615.1_44451_E01	NZ_LS483399	Streptococcus pyogenes strain NCTC8227 chromosome 1	1	749792-749881	1	CRISPRCasFinder	no		cas3,DinG,csm6,DEDDh,csa3	Orphan	GCTATGCTGTTTTGAATGGTCCCA	24	0	0	NA	NA	II-A	1	1	Orphan	cas3,DinG,csm6,DEDDh,csa3	NA|214aa|up_4|NZ_LS483399.1_745637_746279_+,NA	NA|264aa|up_9|NZ_LS483399.1_740064_740856_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|448aa|up_8|NZ_LS483399.1_740855_742199_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|284aa|up_7|NZ_LS483399.1_742300_743152_+	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|319aa|up_6|NZ_LS483399.1_743148_744105_+	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|452aa|up_5|NZ_LS483399.1_744158_745514_+	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|214aa|up_4|NZ_LS483399.1_745637_746279_+	NA	NA|377aa|up_3|NZ_LS483399.1_746341_747472_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|251aa|up_2|NZ_LS483399.1_747481_748234_+	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|255aa|up_1|NZ_LS483399.1_748233_748998_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|211aa|up_0|NZ_LS483399.1_748997_749630_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|611aa|down_0|NZ_LS483399.1_750528_752361_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|146aa|down_1|NZ_LS483399.1_754085_754523_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|339aa|down_2|NZ_LS483399.1_754652_755669_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|142aa|down_3|NZ_LS483399.1_755875_756301_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|164aa|down_4|NZ_LS483399.1_756325_756817_+	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|270aa|down_5|NZ_LS483399.1_756833_757643_+	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|276aa|down_6|NZ_LS483399.1_757639_758467_+	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|550aa|down_7|NZ_LS483399.1_758602_760252_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|263aa|down_8|NZ_LS483399.1_760255_761044_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|349aa|down_9|NZ_LS483399.1_761037_762084_+	cd13546, PBP2_BitB, Substrate binding domain of a putative iron transporter BitB, a member of the type 2 periplasmic binding fold superfamily
GCF_900475615.1_44451_E01	NZ_LS483399	Streptococcus pyogenes strain NCTC8227 chromosome 1	2	829299-829388	2	CRISPRCasFinder	no		cas3,DinG,csm6,DEDDh,csa3	Orphan	ATCCAAAGATGCTGTTGAAGTTTA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csm6,DEDDh,csa3	NA,NA|105aa|down_8|NZ_LS483399.1_839767_840082_+	NA|419aa|up_9|NZ_LS483399.1_815495_816752_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|326aa|up_8|NZ_LS483399.1_816758_817736_+	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein	NA|200aa|up_7|NZ_LS483399.1_817736_818336_+	pfam13702, Lysozyme_like, Lysozyme-like	NA|575aa|up_6|NZ_LS483399.1_818345_820070_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|576aa|up_5|NZ_LS483399.1_820066_821794_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|457aa|up_4|NZ_LS483399.1_822033_823404_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|328aa|up_3|NZ_LS483399.1_823562_824546_-	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|829aa|up_2|NZ_LS483399.1_824736_827223_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|250aa|up_1|NZ_LS483399.1_827242_827992_+	COG3764, SrtA, Sortase (surface protein transpeptidase) [Cell envelope biogenesis, outer membrane]	NA|138aa|up_0|NZ_LS483399.1_828074_828488_+	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein  Bacillus subtilis YwkD and similar proteins	NA|217aa|down_0|NZ_LS483399.1_830612_831263_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|147aa|down_1|NZ_LS483399.1_831259_831700_-	pfam08876, DUF1836, Domain of unknown function (DUF1836)	NA|283aa|down_2|NZ_LS483399.1_831918_832767_+	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|264aa|down_3|NZ_LS483399.1_832756_833548_+	PRK00015, rnhB, ribonuclease HII; Validated	NA|279aa|down_4|NZ_LS483399.1_833611_834448_+	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|710aa|down_5|NZ_LS483399.1_834554_836684_+	PRK05582, PRK05582, type I DNA topoisomerase	NA|449aa|down_6|NZ_LS483399.1_836818_838165_+	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|469aa|down_7|NZ_LS483399.1_838318_839725_+	PRK12581, PRK12581, oxaloacetate decarboxylase; Provisional	NA|105aa|down_8|NZ_LS483399.1_839767_840082_+	NA	NA|117aa|down_9|NZ_LS483399.1_840081_840432_+	PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated
GCF_900475615.1_44451_E01	NZ_LS483399	Streptococcus pyogenes strain NCTC8227 chromosome 1	3	1658832-1658941	3	CRISPRCasFinder	no		cas3,DinG,csm6,DEDDh,csa3	Orphan	AGCTGCTACTGAAGATTCCTCACTCTCAG	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DinG,csm6,DEDDh,csa3	NA,NA|84aa|down_5|NZ_LS483399.1_1669847_1670099_-	NA|169aa|up_9|NZ_LS483399.1_1647209_1647716_+	PRK07261, PRK07261, DNA topology modulation protein	NA|234aa|up_8|NZ_LS483399.1_1647964_1648666_+	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|543aa|up_7|NZ_LS483399.1_1649395_1651024_+	cd08518, PBP2_NikA_DppA_OppA_like_19, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|326aa|up_6|NZ_LS483399.1_1651136_1652114_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|274aa|up_5|NZ_LS483399.1_1652110_1652932_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|268aa|up_4|NZ_LS483399.1_1652943_1653747_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|209aa|up_3|NZ_LS483399.1_1653730_1654357_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|67aa|up_2|NZ_LS483399.1_1654438_1654639_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|824aa|up_1|NZ_LS483399.1_1654807_1657279_-	TIGR01363, pneumococcal_histidine_triad_A_protein, streptococcal histidine triad protein	NA|307aa|up_0|NZ_LS483399.1_1657291_1658212_-	cd01017, AdcA, Metal binding protein AdcA	NA|1188aa|down_0|NZ_LS483399.1_1659710_1663274_-	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|357aa|down_1|NZ_LS483399.1_1663608_1664679_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|395aa|down_2|NZ_LS483399.1_1664886_1666071_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|354aa|down_3|NZ_LS483399.1_1666298_1667360_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|531aa|down_4|NZ_LS483399.1_1667557_1669150_-	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|84aa|down_5|NZ_LS483399.1_1669847_1670099_-	NA	NA|543aa|down_6|NZ_LS483399.1_1670176_1671805_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|463aa|down_7|NZ_LS483399.1_1671906_1673295_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|218aa|down_8|NZ_LS483399.1_1673291_1673945_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|406aa|down_9|NZ_LS483399.1_1674038_1675256_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB
