The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	61804	73260	2093242		Synechococcus_phage(33.33%)	7	NA	NA
WP_000668298.1|61804_63958_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.2	4.2e-46
WP_000801609.1|63970_65320_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_000043303.1|65489_66197_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.8e-41
WP_000361211.1|66398_70124_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.0	1.3e-37
WP_000220633.1|70216_71659_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.7e-55
WP_000182578.1|71695_72718_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.2e-64
WP_000717501.1|72714_73260_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	9.7e-24
>prophage 2
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	125636	158368	2093242	bacteriocin,tRNA	Streptococcus_phage(50.0%)	30	NA	NA
WP_001230165.1|125636_125924_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000724259.1|125975_128084_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571330.1|128080_128722_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	4.3e-23
WP_001038470.1|128928_129735_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001814401.1|129751_130948_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001107614.1|130976_132368_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_001268172.1|132656_133520_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000915347.1|133985_136205_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	25.3	5.2e-39
WP_001096141.1|136197_136665_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000781027.1|136661_138014_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000424422.1|138159_138540_+|bacteriocin	SP_0115 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_001189286.1|139042_139363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424429.1|140120_140492_+|bacteriocin	SPH_0218 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000909532.1|140499_140712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814583.1|141593_142652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810729.1|142965_143943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424474.1|144413_144788_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000619773.1|144995_145898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424404.1|145953_146307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072919.1|146303_147032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000770318.1|148167_148407_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	52.7	9.5e-16
WP_001810727.1|148391_148670_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	52.7	6.0e-22
WP_001035326.1|148955_151091_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282978.1|151491_152613_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000193612.1|152753_153209_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|153218_155132_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331980.1|155483_157163_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639589.1|157164_157398_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000282479.1|157677_157893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974047.1|158215_158368_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
>prophage 3
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	294645	370004	2093242	transposase,protease,holin,integrase	Streptococcus_phage(33.33%)	59	290959:290974	309779:309794
290959:290974	attL	CAAGCCTTGGAAGAAA	NA	NA	NA	NA
WP_001211068.1|294645_295068_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000050748.1|295214_295391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688726.1|295791_298005_+	alpha-xylosidase	NA	NA	NA	NA	NA
WP_000203066.1|298226_298703_-	glutathione peroxidase	NA	NA	NA	NA	NA
WP_001193717.1|298925_302129_+	LPXTG-anchored hyaluronate lyase	NA	NA	NA	NA	NA
WP_000167295.1|303273_303903_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_000161493.1|303912_304914_-	sugar kinase	NA	NA	NA	NA	NA
WP_000684777.1|304944_305586_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA	NA
WP_000185877.1|305604_306420_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_000706826.1|306691_307126_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_000592948.1|307137_308328_+	unsaturated chondroitin disaccharide hydrolase	NA	NA	NA	NA	NA
WP_111690871.1|308338_308830_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_000026610.1|308844_309624_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_000148012.1|309610_310429_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
309779:309794	attR	CAAGCCTTGGAAGAAA	NA	NA	NA	NA
WP_000381738.1|310428_310722_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_000657059.1|310743_312645_+	alginate lyase family protein	NA	NA	NA	NA	NA
WP_000412453.1|312704_313706_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000838117.1|313815_314151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000711739.1|314161_314404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000712382.1|314414_314957_-	DUF3278 domain-containing protein	NA	NA	NA	NA	NA
WP_001082474.1|314972_315167_-	helix-turn-helix transcriptional regulator	NA	I3VYZ1	Thermoanaerobacterium_phage	42.6	7.2e-06
WP_000159414.1|315332_316283_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_000818547.1|316294_316612_+	cell division protein FtsL	NA	NA	NA	NA	NA
WP_000872267.1|316615_318868_+	penicillin-binding protein 2X	NA	NA	NA	NA	NA
WP_000470785.1|318869_319850_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_001063435.1|320457_322563_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.7	2.6e-117
WP_000032550.1|322859_323342_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_000743571.1|323436_324921_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156818.1|325073_326681_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_172454081.1|326883_327012_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
WP_000091075.1|327746_329192_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	59.9	3.1e-133
WP_000565362.1|329193_329925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000664182.1|329933_330626_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	55.0	1.6e-60
WP_001142507.1|330635_331319_+	polysaccharide biosynthesis tyrosine autokinase CpsD	NA	A0A1X9I5D6	Streptococcus_phage	59.9	2.4e-72
WP_000358337.1|331334_332702_+	sugar transferase	NA	NA	NA	NA	NA
WP_000861662.1|332705_333155_+	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA	NA
WP_000578433.1|333154_333658_+	multidrug MFS transporter	NA	NA	NA	NA	NA
WP_000702184.1|333647_334820_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_000573793.1|334816_335836_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000389894.1|335850_336807_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	39.3	1.6e-13
WP_000066237.1|337735_339199_+	flippase	NA	NA	NA	NA	NA
WP_111690896.1|344077_344944_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_000842570.1|346663_348646_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001032457.1|348946_354250_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001040003.1|354416_356576_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
WP_000248787.1|356572_357169_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	8.7e-18
WP_001155321.1|357534_358488_+|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_079012923.1|358480_359008_+	DUF1273 family protein	NA	NA	NA	NA	NA
WP_000146522.1|359077_359407_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711391.1|359892_361050_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039255.1|361062_362457_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158781.1|362532_363957_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	1.6e-41
WP_000518011.1|363968_364658_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000771113.1|364755_365778_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000698048.1|365795_366794_+|holin	choline-binding protein CbpJ	holin	NA	NA	NA	NA
WP_000765692.1|366911_368144_-	MFS transporter	NA	NA	NA	NA	NA
WP_016397727.1|368186_368774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001811282.1|368673_369012_-	lantibiotic-modifying protein	NA	NA	NA	NA	NA
WP_000196981.1|369674_370004_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	429591	491675	2093242	transposase,bacteriocin,tRNA	Bacillus_phage(15.38%)	58	NA	NA
WP_079012916.1|429591_430533_-|transposase	IS110 family transposase	transposase	A0A0U3ULR1	Bacillus_phage	31.1	1.5e-24
WP_000280769.1|430787_431633_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000904574.1|431779_432841_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000260638.1|433188_435513_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.8	5.1e-114
WP_001828945.1|435880_436099_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001814393.1|436194_436443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000384133.1|436435_436720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_074186948.1|437908_438166_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_001814392.1|438290_439730_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691691.1|439733_441083_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|441271_442120_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403166.1|442134_442683_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693302.1|442689_442902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656524.1|443003_444686_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	3.4e-19
WP_001148110.1|444670_445501_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181374.1|445693_446197_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185835.1|446649_447213_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001820561.1|447226_447853_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867290.1|447880_448270_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_000333653.1|448274_448724_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000418402.1|448851_449439_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105232.1|449828_451436_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	2.0e-141
WP_000026679.1|451994_453626_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795214.1|453918_458859_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|458948_460145_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119893.1|460280_460808_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659547.1|460884_461241_+	transcriptional repressor GlnR	NA	NA	NA	NA	NA
WP_001122904.1|461277_462624_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|462719_462839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410535.1|462803_462953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_111690873.1|463672_464683_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000651181.1|464739_465537_+	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.7e-21
WP_001813510.1|465547_466153_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_001813066.1|466100_466823_-	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	30.1	4.6e-13
WP_000029046.1|467655_469119_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229083.1|469131_471465_-	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	26.5	4.5e-25
WP_001840591.1|472419_473766_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	1.3e-77
WP_078169601.1|473978_474290_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000255768.1|474453_475488_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|475514_476039_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|476518_478342_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000114432.1|478343_478700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066294.1|479101_480238_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.3	3.1e-24
WP_000777761.1|480617_480905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001112361.1|480914_481325_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	35.6	4.4e-05
WP_000889923.1|481392_482124_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653767.1|482120_483170_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132572.1|483337_483667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682135.1|483943_484282_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219122.1|484286_485024_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001017626.1|485037_486378_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000358817.1|486419_486575_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069091.1|486631_487993_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_078133841.1|488003_489647_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	27.4	6.3e-42
WP_001810228.1|489573_490161_-	peptidase C39	NA	NA	NA	NA	NA
WP_001093259.1|490442_490640_+|bacteriocin	bacteriocin-like peptide BlpI	bacteriocin	NA	NA	NA	NA
WP_001093248.1|491106_491376_+|bacteriocin	bacteriocin-like peptide BlpJ	bacteriocin	NA	NA	NA	NA
WP_000379964.1|491444_491675_+|bacteriocin	bacteriocin-like peptide BlpU	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	784359	865667	2093242	transposase,tRNA,holin,protease,integrase,bacteriocin	Streptococcus_phage(33.33%)	66	811068:811112	862788:862832
WP_001840591.1|784359_785706_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	1.3e-77
WP_000920159.1|787151_787649_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_000283791.1|787648_789304_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	33.5	6.5e-47
WP_001041549.1|789331_789526_+	DUF3272 domain-containing protein	NA	NA	NA	NA	NA
WP_000114489.1|789675_790446_+	Fe-S cluster assembly ATPase SufC	NA	A0A2R8FG22	Brazilian_cedratvirus	28.5	2.5e-09
WP_000196405.1|790473_791736_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000887717.1|791746_792973_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.9e-104
WP_001218482.1|792959_793400_+	SUF system NifU family Fe-S cluster assembly protein	NA	A0A2P1CJL8	Mycobacterium_phage	39.0	1.6e-13
WP_000797065.1|793453_794866_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_000719154.1|795064_796306_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	25.5	8.2e-18
WP_000489841.1|796408_797518_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000920670.1|798942_799683_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_000640780.1|799679_800591_+	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_000701423.1|800587_802540_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_000908830.1|802703_804929_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.9	3.7e-85
WP_000073929.1|804973_805411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000638912.1|805548_806691_+	cysteine desulfurase	NA	NA	NA	NA	NA
WP_001200077.1|806699_807914_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_001076710.1|808049_808874_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000546757.1|808895_809549_+	esterase family protein	NA	NA	NA	NA	NA
WP_001108631.1|809648_810815_+	hypothetical protein	NA	NA	NA	NA	NA
811068:811112	attL	ATACTCAATGAAAATCAAAGAGCAAACTAGGAAGCTAGCCGCAGG	NA	NA	NA	NA
WP_000627748.1|811322_812816_+	SAM-dependent DNA methyltransferase	NA	A0A2H4UVB0	Bodo_saltans_virus	31.8	3.0e-27
WP_001814483.1|812828_813752_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000260605.1|813843_814080_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_000158359.1|814076_814490_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_000444456.1|814607_815573_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.8e-33
WP_000756217.1|815606_816623_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000526352.1|816850_820201_+	DEAD/DEAH box helicase family protein	NA	A0A2H4P9W3	Gordonia_phage	24.8	1.4e-11
WP_001042996.1|820786_821257_-	arginine repressor	NA	NA	NA	NA	NA
WP_001212052.1|821273_823547_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_000561514.1|823892_826994_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.8	2.3e-114
WP_000820852.1|827076_828084_+	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_001042809.1|828142_829648_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_000749599.1|831410_832283_+	DUF4300 family protein	NA	NA	NA	NA	NA
WP_000420563.1|832915_833227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000759790.1|833230_833947_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000617843.1|834076_834892_-	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_000123620.1|834888_835794_-	permease	NA	NA	NA	NA	NA
WP_000359137.1|836179_838309_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_000778577.1|838295_838745_+	SprT family protein	NA	NA	NA	NA	NA
WP_001085044.1|838803_839076_+	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_000173352.1|840046_840805_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	1.0e-26
WP_000489391.1|840806_842795_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_162837274.1|842836_843481_-	VIT1/CCC1 transporter family protein	NA	NA	NA	NA	NA
WP_001153906.1|843452_844502_-|transposase	IS30 family transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	34.4	1.2e-33
WP_000661011.1|845208_846684_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000366717.1|847620_848481_+	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_000088773.1|848477_849737_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_000764381.1|849736_850864_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_000969449.1|850860_851946_+	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	47.5	2.0e-89
WP_001246755.1|851955_852831_+	N-carbamoylputrescine amidase	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.1e-77
WP_000593566.1|853011_853821_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000602452.1|854092_854314_+|bacteriocin	SP_0924 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000745382.1|854367_855039_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001809535.1|855090_855288_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001025704.1|855280_856189_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
WP_000745387.1|856185_856647_+	signal peptidase II	NA	NA	NA	NA	NA
WP_000403214.1|856636_857524_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000728276.1|857526_859410_+|holin	phosphorylcholine esterase CbpE	holin	Q332B9	Clostridium_botulinum_C_phage	22.9	1.2e-09
WP_001844793.1|859489_860620_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000254689.1|860629_861892_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.8	5.0e-140
WP_000689709.1|861895_862693_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.6	2.7e-59
WP_000033362.1|862912_863551_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	68.1	9.8e-76
862788:862832	attR	CCTGCGGCTAGCTTCCTAGTTTGCTCTTTGATTTTCATTGAGTAT	NA	NA	NA	NA
WP_000806706.1|863547_864438_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
WP_000358228.1|864477_864795_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166882.1|864797_865667_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	2.9e-115
>prophage 6
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	1004898	1077918	2093242	transposase,protease,integrase	Streptococcus_phage(53.33%)	51	1044813:1044872	1078050:1079751
WP_100066212.1|1004898_1005702_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_000992855.1|1005894_1008186_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.1	9.5e-129
WP_000286922.1|1008228_1008909_+	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_000743316.1|1008905_1009595_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_000653403.1|1009612_1010254_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000462487.1|1010336_1010552_-	DUF4649 family protein	NA	NA	NA	NA	NA
WP_000863509.1|1010559_1010907_-	DUF1831 domain-containing protein	NA	NA	NA	NA	NA
WP_000639664.1|1010911_1012027_-	cysteine desulfurase	NA	H7BUW1	unidentified_phage	36.8	1.0e-27
WP_001283813.1|1012036_1012996_-	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	32.8	9.3e-38
WP_000681292.1|1013108_1013678_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_000171676.1|1013805_1014477_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_000799053.1|1014460_1015279_+	NAD kinase	NA	NA	NA	NA	NA
WP_001210004.1|1015275_1016172_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000451586.1|1016215_1017190_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_000981522.1|1017530_1017830_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_000109138.1|1019119_1019434_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_000613700.1|1019449_1019794_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_000916509.1|1019810_1020104_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_000587444.1|1021057_1021975_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_000592056.1|1022067_1022916_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	46.5	1.4e-64
WP_000161397.1|1023057_1023897_+	DegV family protein	NA	NA	NA	NA	NA
WP_001284639.1|1024002_1024278_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	66.3	9.2e-23
WP_000584903.1|1024705_1026607_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.3	6.6e-51
WP_000400550.1|1026609_1027473_+	MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001083027.1|1027552_1028731_+	MFS transporter	NA	NA	NA	NA	NA
WP_001042587.1|1028823_1030782_+	NAD-dependent DNA ligase LigA	NA	A0A1W6DX16	Sphingobium_phage	35.9	6.0e-100
WP_000283068.1|1030893_1033173_+	type I pullulanase	NA	NA	NA	NA	NA
WP_000199371.1|1033716_1035141_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000370236.1|1035623_1037552_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_000787277.1|1037541_1038684_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_000687072.1|1038673_1039813_+	glucose-1-phosphate adenylyltransferase subunit GlgD	NA	NA	NA	NA	NA
WP_000697294.1|1039809_1041243_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_000706432.1|1041955_1042759_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	35.0	1.4e-34
WP_000131076.1|1042755_1043202_-	YueI family protein	NA	NA	NA	NA	NA
WP_000022815.1|1043365_1044670_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	94.2	8.1e-234
1044813:1044872	attL	CCCAAATCATTCATACCTCTCTCAACTAGATGTAACTTACAAAACCCCTGACCTCATGAG	NA	NA	NA	NA
WP_001808790.1|1045003_1046350_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	5.8e-78
WP_025171968.1|1046515_1046962_-|integrase	tyrosine-type recombinase/integrase	integrase	W6LMU7	Streptococcus_phage	73.6	1.6e-40
WP_000772358.1|1048234_1051510_+	ATP-dependent nuclease subunit B	NA	NA	NA	NA	NA
WP_000767268.1|1051506_1055157_+	helicase-exonuclease AddAB subunit AddA	NA	G3MA40	Bacillus_virus	25.3	8.8e-20
WP_001814475.1|1055416_1056697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000417141.1|1056804_1062828_+	G5 domain-containing protein	NA	NA	NA	NA	NA
WP_000054802.1|1062871_1068196_+	G5 domain-containing protein	NA	NA	NA	NA	NA
WP_001808790.1|1068362_1069709_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	5.8e-78
WP_057484782.1|1069871_1071041_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_000817623.1|1071402_1071759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000401239.1|1071763_1072129_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA	NA
WP_000237145.1|1072115_1073939_+	relaxase/mobilization nuclease domain-containing protein	NA	A0A1B0RXG0	Streptococcus_phage	35.9	2.3e-05
WP_000537005.1|1074052_1074919_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000098314.1|1075509_1075761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000792536.1|1075989_1076292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001808790.1|1076571_1077918_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	5.8e-78
1078050:1079751	attR	CTCATGAGGTCAGGGGTTTTGTAAGTTACATCTAGTTGAGAGAGGTATGAATGATTTGGGGTTATATAATTTGCCGTCTAATATCACCCAATCTAAGGGATTTAAAATACACCTGAGCGCCTCAATATTAAATGCTAATTTGGTTGCTAAAAAATTCTTTGATTTTATATTTTCTAGAGAGAAGAAGATAAATTTCAAAATTTTGGTTAGCATTAAAGAACTTTCTTTGCAAAATACAGGGCTTAATGGTTATTCACAAGTCGGGAAATTCATTACAATTTATCCAAAAGATAATAAAGAGTTTCAACGTTTGTTACACAAATTAGAAATATTGTATAAAGGTGTAAAGGGTGTAAACATACCATCAGATTTCAGATTTCAACTTAGCGAGGTTGTATATTACAGATATGGGGAGTTCGTAAAAGATAGCACTTTCAAGGATAAAAGAGATAAGAAAATCCCTTCAAATGTGAATGTTCCAATAAGGGATTACTATATTCCAAGATATAACACTATTCCTGATCAATATATTATTTTGGAAGTGATTTCTAAAAATGCCAAAGGTGGAGTTTATAAAGTATTTAATACTCAAAAGCGAGTTTATTCTTTATTAAAAGAAGCTAGTGATTTATCGTTGGTTGATTTTACAAATAGAGATTCTGTGAATCGTTTAATAAATGAAAGAGAAATATTAGTAGAATTGGAAAAGGAGGAATTTACTCCAAAAGTTTTTAACGATTTTTACATAAAGAATTCGTATTTTGTGGAATTTGAGTTTATTATTGCAGATAAATTAAGCGAGTATAATATGGTTAGTGGCTCGTATGATTGGTTTTTAACATTAATTGATTATATGGAGATAATAAACTCCAAATATAATCTTTCCTATAGAGATTTATCATTTAATAATATACTTATTGATAATAGAAATAATATTTATATTATAGACTTTGAGCATGCCCTAAGGAAAGAAACTCAAATTGAAGAAAAAAAGTTGCCTCTATTTGGAACTCCAGGGTTTTATGAAACCAACTTAAATTTATTGAATAATCAACCAGAGGATATTATGGGATTGGTTTTGTTATTATATTGGAGTCAGAATTTAGATGATTTTAACGTCTTTTCAAAAATGAGTTTTTTAGAAGCGATGGAGTATGCAATGAATTTTAATTCGCGTCGCTTAGACACACTTGATAAATCAGATTGGCTTTATCATATTTATAAAAAAGCGTTCAATTATAAATATGATACTTTTTCTGAATTAAAAAAAGATTTTATAGAGGTATTAAAATAAAGGTAGGGGTGTTATGAATTGTTTCTTGAAAATGAATAATGTAAGTGTTCGTTATGATGACGTAATAGCTTTAAAAGATATAACTTTACAAATAAATAAGGGAGATTTCATTGGCTTATTAGGTTCAAATGGTGCAGGTAAATCTACGTTAATTAATTCTATTGTAGGTTTTCAAGAGATTTATTTAGGAGAAATAGAGTATTGTGATAAAGATTTGATAGTTAGTTCTCAACCTTTTGCTCATTTAGGCTTTACTCCTCAAACCACAGTAATTGATTTTTATACTACTGTGAAGGACAATGTAATATTGGGGCTGAACCTTGCTGGAAAGTTTGGGAAAAATGCTGAGAAGTTGTGTCAAATAGCCTTAGAAATTGTTGGGTTAGCTGATAAAAAAAATAATTTGGT	NA	NA	NA	NA
>prophage 7
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	1278331	1334004	2093242	transposase,tRNA	Bacillus_virus(23.53%)	58	NA	NA
WP_000811727.1|1278331_1280950_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.6	5.3e-59
WP_000847075.1|1280971_1281457_-	LURP-one-related family protein	NA	NA	NA	NA	NA
WP_000784180.1|1281731_1281971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000725682.1|1282231_1283302_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000712728.1|1283298_1284072_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000753801.1|1284068_1284875_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	26.5	2.5e-12
WP_000742919.1|1284855_1286013_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	40.4	7.6e-34
WP_000116180.1|1286172_1287078_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_000360294.1|1287951_1288683_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000744821.1|1288824_1290096_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	47.5	2.2e-103
WP_000837359.1|1290115_1290931_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_111690884.1|1291195_1292452_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.9	2.1e-223
WP_000946463.1|1292510_1293164_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000128643.1|1293175_1293934_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.7	3.9e-15
WP_000109217.1|1293946_1294750_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.7	9.6e-12
WP_001201789.1|1294760_1295645_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_001070908.1|1295634_1296552_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_000746338.1|1296551_1297430_-	phosphate ABC transporter substrate-binding protein PstS	NA	NA	NA	NA	NA
WP_001160271.1|1298003_1299308_-	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000444037.1|1299308_1300082_-	inositol monophosphatase family protein	NA	NA	NA	NA	NA
WP_001041971.1|1300071_1300350_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000631259.1|1300349_1300751_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
WP_000850626.1|1300960_1301578_-	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_000875468.1|1301567_1302341_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_000524774.1|1302351_1303089_-	acyl-[acyl-carrier-protein] thioesterase	NA	NA	NA	NA	NA
WP_001170072.1|1303093_1304224_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_000517372.1|1304307_1304697_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000895040.1|1304712_1305096_-	DUF948 domain-containing protein	NA	NA	NA	NA	NA
WP_000886666.1|1305096_1305885_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_000115143.1|1305877_1306813_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_000048055.1|1306942_1307119_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_001155321.1|1307478_1308432_+|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_000864623.1|1308504_1309212_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_001090150.1|1309362_1310391_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_073177112.1|1311051_1312179_-	G5 domain-containing protein	NA	NA	NA	NA	NA
WP_000835658.1|1312893_1313445_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000058034.1|1313742_1314567_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	57.1	5.3e-74
WP_000283119.1|1314563_1316024_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	43.3	1.5e-103
WP_000797184.1|1316139_1316628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001107505.1|1316617_1316827_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	49.1	4.1e-07
WP_000640912.1|1317212_1317665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076709045.1|1318004_1318748_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.4	4.3e-22
WP_111690886.1|1319183_1319903_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_001811050.1|1320158_1320470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000169109.1|1320484_1321771_-	U32 family peptidase	NA	Q6DW11	Phage_TP	31.1	1.6e-40
WP_001262531.1|1322394_1322577_+	ApaLI family restriction endonuclease	NA	NA	NA	NA	NA
WP_078169604.1|1322586_1322937_+	ApaLI family restriction endonuclease	NA	NA	NA	NA	NA
WP_000217307.1|1322944_1324135_+	site-specific DNA-methyltransferase	NA	A0A0H3UZ66	Geobacillus_virus	37.4	7.0e-43
WP_000122909.1|1324649_1325642_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000708386.1|1325801_1327556_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.2	4.1e-23
WP_000657828.1|1327539_1329261_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.1e-28
WP_000368971.1|1329271_1329856_+	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_001141951.1|1329855_1330551_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000229349.1|1330538_1331903_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	4.2e-15
WP_001811052.1|1332357_1332516_-|transposase	transposase domain-containing protein	transposase	NA	NA	NA	NA
WP_000245766.1|1332587_1333037_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_024266141.1|1333109_1333829_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000691854.1|1333809_1334004_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	1339980	1377261	2093242	holin,transposase,tRNA	Streptococcus_phage(23.08%)	38	NA	NA
WP_000290654.1|1339980_1340616_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	26.9	1.3e-06
WP_000972923.1|1340617_1341445_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001272961.1|1343044_1343656_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855754.1|1343700_1344429_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272304.1|1344467_1345379_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	1.0e-89
WP_000926600.1|1345444_1345669_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590970.1|1345746_1346490_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	4.7e-29
WP_001103449.1|1346489_1347290_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|1347447_1347804_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170347.1|1347797_1348328_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
WP_000405832.1|1348327_1348822_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858729.1|1348956_1349403_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097986.1|1349399_1350047_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689945.1|1350067_1350649_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138532.1|1350649_1351525_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036789.1|1351676_1353056_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000175413.1|1353349_1354273_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915945.1|1354332_1354938_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	4.5e-54
WP_000673678.1|1354955_1356200_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	3.8e-55
WP_000371287.1|1356422_1356680_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_000164754.1|1356721_1358758_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038732.1|1358969_1359887_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_000429568.1|1360430_1361192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099672.1|1361464_1362307_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.8	2.2e-51
WP_050076198.1|1362420_1363812_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001811065.1|1364046_1364424_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
WP_000915891.1|1364656_1365634_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_000850581.1|1365630_1366713_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.3	1.8e-37
WP_111690888.1|1366776_1367824_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001040724.1|1369680_1370877_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_001155321.1|1371040_1371994_-|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	35.2	1.6e-34
WP_000348126.1|1373032_1373902_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248992.1|1374125_1374647_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_001021423.1|1374604_1375711_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_000935666.1|1375821_1376076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200308.1|1376415_1376949_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001811210.1|1376935_1377151_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001811209.1|1377117_1377261_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	1448058	1454809	2093242	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081011.1|1448058_1449024_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
WP_000011310.1|1449057_1449969_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.3	9.8e-154
WP_001231086.1|1449965_1450943_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163033.1|1450939_1451830_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
WP_001140412.1|1451881_1452262_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|1452272_1452860_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000106346.1|1452868_1454101_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
WP_000442275.1|1454132_1454303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162485.1|1454302_1454809_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	42.5	6.7e-27
>prophage 10
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	1924277	1982035	2093242	transposase,tRNA,holin,protease,integrase	Bacillus_phage(25.0%)	56	1951770:1951809	1982796:1982835
WP_000183464.1|1924277_1924694_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000415103.1|1925441_1926458_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000202216.1|1926479_1927379_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.0	2.1e-76
WP_000658494.1|1927445_1928123_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_000834343.1|1928106_1928646_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_000885100.1|1928657_1929788_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA	NA
WP_000127472.1|1929855_1930554_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_001820821.1|1930783_1931695_-	EamA family transporter	NA	NA	NA	NA	NA
WP_001180983.1|1931759_1934225_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_000546887.1|1934366_1935623_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A2C9CYK4	Yersinia_phage	41.5	1.5e-75
WP_000008784.1|1935700_1937764_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	26.0	9.9e-53
WP_000910909.1|1937765_1938044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001095507.1|1938195_1939044_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_001037912.1|1939888_1940461_+	membrane protein	NA	NA	NA	NA	NA
WP_000950158.1|1941505_1943764_-	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	37.5	5.7e-09
WP_000747287.1|1943789_1945307_-	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_000095478.1|1945856_1947128_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000414968.1|1947238_1948531_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_001065636.1|1948532_1949375_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_000938224.1|1949635_1950436_+	DUF1189 domain-containing protein	NA	NA	NA	NA	NA
WP_001145439.1|1950445_1951432_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
1951770:1951809	attL	GAAGCTGACGTGGTTTGAAGAGATTTTCGAAGAGTATTAA	NA	NA	NA	NA
WP_000806289.1|1951812_1952754_-	YitT family protein	NA	NA	NA	NA	NA
WP_000830876.1|1952731_1954495_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SJ84	Klosneuvirus	26.4	5.0e-13
WP_000832202.1|1954846_1955077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000771214.1|1955094_1955736_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000730279.1|1955747_1956482_-	DUF3169 family protein	NA	NA	NA	NA	NA
WP_001046144.1|1956484_1956682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001176227.1|1956681_1956888_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001816607.1|1956897_1957212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000775882.1|1957549_1958839_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000770613.1|1958916_1960164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000434966.1|1960354_1961206_-	transcriptional regulator Rgg	NA	NA	NA	NA	NA
WP_001204054.1|1961329_1961671_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_000137356.1|1961924_1963628_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_000986381.1|1963860_1964793_-	transketolase family protein	NA	NA	NA	NA	NA
WP_000603778.1|1964789_1965647_-	transketolase	NA	A0A2K9L6P9	Tupanvirus	31.2	7.1e-29
WP_000975292.1|1965650_1966997_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
WP_000912476.1|1967009_1967294_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_000460924.1|1967297_1969328_-	BglG family transcription antiterminator	NA	NA	NA	NA	NA
WP_000136837.1|1969518_1970526_+	SPFH domain-containing protein	NA	NA	NA	NA	NA
WP_000796544.1|1970528_1970729_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
WP_000290417.1|1970880_1971063_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_001265622.1|1971078_1971228_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000862760.1|1971319_1972816_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	27.4	1.1e-19
WP_000571454.1|1972831_1973080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099062.1|1973141_1974158_-	replication initiation factor domain-containing protein	NA	NA	NA	NA	NA
WP_000262970.1|1974162_1974582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000924762.1|1974851_1975136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002894.1|1975154_1975292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000488482.1|1975278_1976625_-	cell division protein FtsK	NA	R4JMR0	Bacillus_phage	27.6	9.2e-07
WP_000867242.1|1976820_1977042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000614814.1|1977242_1977554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096737.1|1977837_1978023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000753881.1|1978859_1980725_-|holin	choline-binding protein PcpA	holin	NA	NA	NA	NA
WP_001809622.1|1981059_1981242_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_088788744.1|1981186_1982035_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
1982796:1982835	attR	GAAGCTGACGTGGTTTGAAGAGATTTTCGAAGAGTATTAA	NA	NA	NA	NA
>prophage 11
NZ_LS483417	Streptococcus pneumoniae strain NCTC11902 chromosome 1	2093242	2071396	2080150	2093242		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|2071396_2072236_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
WP_000835710.1|2072220_2073048_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.1e-22
WP_000712136.1|2073044_2073590_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001227958.1|2073600_2074422_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170203.1|2074463_2075747_-	insulinase family protein	NA	A0A0G2Y5U8	Acanthamoeba_polyphaga_mimivirus	31.0	1.6e-16
WP_000424273.1|2075743_2076994_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.3	2.0e-93
WP_000455903.1|2077152_2077521_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266660.1|2077523_2078621_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|2078671_2080150_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
