The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	396624	404128	1932951		environmental_halophage(16.67%)	8	NA	NA
WP_003078307.1|396624_397857_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.1	2.5e-104
WP_004234063.1|397843_398293_+	SUF system NifU family Fe-S cluster assembly protein	NA	A0A218MKD1	uncultured_virus	29.9	1.4e-07
WP_003078343.1|398380_399622_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	24.7	3.3e-19
WP_003078323.1|399778_401122_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	29.3	5.7e-41
WP_014829582.1|401282_402092_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003078315.1|402091_402835_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	3.4e-27
WP_003073722.1|402929_403154_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_003078319.1|403216_404128_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.5	1.7e-89
>prophage 2
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	505757	515020	1932951		Streptococcus_phage(81.82%)	13	NA	NA
WP_003078178.1|505757_506522_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	1.0e-15
WP_003078197.1|506521_507232_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.6	2.2e-15
WP_003078187.1|507378_508035_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	70.8	5.5e-82
WP_003078147.1|508099_508963_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	57.5	2.7e-92
WP_003078145.1|509115_509754_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	65.2	7.0e-74
WP_003078169.1|509750_510644_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	56.8	8.9e-83
WP_003078181.1|510678_510996_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.9	3.1e-30
WP_003078138.1|510998_511862_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	71.1	4.5e-108
WP_003078172.1|511873_512383_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	63.6	9.9e-55
WP_003073487.1|512400_512754_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	64.1	1.2e-35
WP_003078163.1|513137_513767_+	endonuclease III	NA	NA	NA	NA	NA
WP_003073479.1|513794_514181_-	VOC family protein	NA	NA	NA	NA	NA
WP_003073477.1|514192_515020_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	80.6	4.6e-126
>prophage 3
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	518188	568662	1932951	bacteriocin,tRNA,protease	Planktothrix_phage(12.5%)	56	NA	NA
WP_003078166.1|518188_520186_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	31.2	4.1e-88
WP_003078207.1|520275_521457_-	DUF2974 domain-containing protein	NA	NA	NA	NA	NA
WP_003078190.1|521548_522235_+	response regulator transcription factor	NA	A0A220YL79	Alteromonas_virus	25.0	1.2e-05
WP_003078184.1|522218_523199_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003078156.1|523321_524080_+	beta-carotene 15,15'-monooxygenase	NA	NA	NA	NA	NA
WP_009568230.1|524297_525077_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	1.0e-26
WP_003077109.1|525057_527037_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_003077113.1|527185_528052_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	33.5	4.8e-17
WP_003073448.1|528053_528917_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003077111.1|528961_529399_+	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003073443.1|529411_529801_+	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_003077116.1|529874_530840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014829593.1|531614_532382_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	1.0e-26
WP_004233790.1|532374_534363_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004233991.1|534534_535923_+	amino acid permease	NA	NA	NA	NA	NA
WP_003078125.1|535991_536420_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_004233937.1|536432_536894_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_004233743.1|536890_537529_+	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA	NA
WP_003069970.1|537674_537878_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	76.6	1.5e-22
WP_003073423.1|538072_538309_+	DUF2829 domain-containing protein	NA	G3MBC9	Bacillus_virus	36.4	3.3e-05
WP_014829597.1|538301_539000_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_004233929.1|539020_539758_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_004233746.1|539754_540087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004233882.1|540096_540255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004233870.1|540293_540743_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_004233988.1|540827_542207_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L4K9	Tupanvirus	36.0	1.2e-30
WP_004233934.1|542215_542767_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_004233748.1|542776_543085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004233812.1|543138_543831_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_004234025.1|543848_544157_+	DUF898 family protein	NA	S5MNN8	Brevibacillus_phage	64.0	2.8e-12
WP_004233946.1|544268_545810_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.8	8.8e-54
WP_016670356.1|545864_546101_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_004233764.1|546136_546940_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	37.6	4.5e-17
WP_004233735.1|547460_547670_+	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_004233916.1|547759_550057_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	50.9	8.4e-85
WP_004233822.1|550403_552773_+	HAD-IC family P-type ATPase	NA	A0A218MNH6	uncultured_virus	22.0	4.4e-20
WP_003073386.1|552792_553146_-	DUF3397 family protein	NA	NA	NA	NA	NA
WP_004233911.1|553307_553733_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003073378.1|553822_554512_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003073377.1|554796_555537_+	UMP kinase	NA	NA	NA	NA	NA
WP_003069936.1|555540_556098_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_004233919.1|556210_557065_+	RNA-binding virulence regulatory protein CvfB	NA	NA	NA	NA	NA
WP_004234005.1|557124_558162_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_004233738.1|558232_558838_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	56.2	1.3e-61
WP_003073369.1|558910_559285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004234001.1|559765_561916_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	27.3	7.2e-38
WP_003078103.1|561926_563288_+|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_037589545.1|563356_563536_+|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014829603.1|563616_564933_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_004234021.1|564934_565687_-	response regulator transcription factor	NA	A0A1V0E029	Clostridioides_phage	24.6	6.7e-15
WP_004233848.1|565849_566563_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_004233901.1|566794_567022_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003073339.1|567057_567378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004233876.1|567607_567823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004233800.1|568050_568344_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_004234003.1|568437_568662_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 4
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	774934	782663	1932951		Escherichia_phage(33.33%)	8	NA	NA
WP_003075661.1|774934_775405_+	8-oxo-dGTP diphosphatase	NA	A0A292GDD2	Xanthomonas_phage	45.6	8.7e-05
WP_003072993.1|775545_776415_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	65.3	5.8e-103
WP_003075632.1|776418_777012_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	H9NC63	Sphingomonas_phage	33.1	3.9e-10
WP_003075678.1|777045_778092_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	40.7	2.3e-61
WP_003075657.1|778126_779146_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	49.4	2.3e-90
WP_003075710.1|779465_780047_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003075664.1|780313_781396_-	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_003075707.1|781658_782663_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	28.7	2.3e-23
>prophage 5
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	822262	832757	1932951	protease	Bacillus_phage(57.14%)	10	NA	NA
WP_003077893.1|822262_823480_+	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	50.5	5.2e-94
WP_003077918.1|823565_824405_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	56.8	8.1e-86
WP_003072921.1|824690_825203_+	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	1.2e-23
WP_003024903.1|825202_825376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003072918.1|825429_826662_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.7	1.9e-131
WP_003068868.1|826674_827262_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_003077899.1|827384_828092_+	glucosaminidase domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.2	1.1e-14
WP_003077927.1|828267_829065_+	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
WP_003077883.1|829282_831019_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.7	1.3e-45
WP_003077915.1|831008_832757_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.0	4.9e-53
>prophage 6
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	1788915	1798552	1932951		Streptococcus_phage(50.0%)	10	NA	NA
WP_003077290.1|1788915_1790724_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	30.0	1.5e-23
WP_003075248.1|1790748_1791441_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	67.0	9.6e-77
WP_003075250.1|1791451_1792147_-	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	56.5	5.1e-62
WP_037589490.1|1792155_1792887_-	tyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_003077281.1|1792889_1794335_-	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	57.8	3.3e-135
WP_003075255.1|1794509_1795115_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	58.3	4.1e-55
WP_003077399.1|1795119_1795626_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003077234.1|1795629_1796133_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003077317.1|1796189_1796333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003077231.1|1796341_1798552_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	65.8	2.3e-281
>prophage 7
NZ_LS483436	Streptococcus intermedius strain NCTC11324 chromosome 1	1932951	1829185	1837180	1932951	head,tail	Streptococcus_phage(83.33%)	8	NA	NA
WP_016670425.1|1829185_1829467_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	64.4	1.2e-25
WP_003077331.1|1829469_1829823_+|head,tail	head-tail adaptor protein	head,tail	M1PFA2	Streptococcus_phage	65.6	1.3e-37
WP_003077212.1|1829854_1830670_+	DnaD domain protein	NA	A0A2I6QQV2	Streptococcus_phage	63.4	1.1e-68
WP_003077200.1|1830685_1831510_+	ATP-binding protein	NA	M1PKQ7	Streptococcus_phage	40.4	9.1e-50
WP_003077305.1|1832240_1832666_+	DUF1492 domain-containing protein	NA	A0A126GGN9	Streptococcus_phage	30.9	4.5e-08
WP_014829834.1|1833585_1834026_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003075329.1|1834022_1834481_+	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_003077322.1|1834621_1837180_-	DNA mismatch repair protein MutS	NA	E5RUN9	Heterocapsa_circularisquama_DNA_virus	22.2	2.9e-38
