The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_LS483439	Acholeplasma laidlawii strain NCTC10116 chromosome 1	1497557	593806	647484	1497557	protease,integrase,transposase,portal,capsid,tRNA,terminase,head	Caldibacillus_phage(13.04%)	60	613160:613176	627072:627088
WP_012242508.1|593806_594934_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_012242509.1|594933_597183_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	28.1	3.7e-61
WP_012242510.1|597238_597982_-	esterase	NA	NA	NA	NA	NA
WP_049751943.1|597982_598789_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049751944.1|598928_600122_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_064211832.1|600118_601105_+	glyoxalase	NA	NA	NA	NA	NA
WP_012242514.1|601114_601561_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012242515.1|601557_602151_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_012242516.1|602219_602669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242517.1|602661_603078_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_012242518.1|603074_604217_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	F5CA72	Streptococcus_phi-m46.1-like_phage	33.7	1.1e-53
WP_012242519.1|604423_604741_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_081423640.1|604833_605166_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	35.2	1.2e-08
WP_081423642.1|605448_605637_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	47.3	1.4e-06
WP_012242520.1|605788_605956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041633885.1|605986_607327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041633889.1|607386_609591_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_012242523.1|609742_610417_+	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_012242524.1|610401_610929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242525.1|611013_611490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242526.1|611764_612187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242527.1|612231_612609_+	hypothetical protein	NA	NA	NA	NA	NA
613160:613176	attL	TATGCTTTAAGCATATA	NA	NA	NA	NA
WP_012242528.1|613212_614931_-	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	40.7	9.1e-92
WP_012242530.1|615320_615920_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041633899.1|616174_616468_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_145961054.1|616516_617470_+|integrase	tyrosine-type recombinase/integrase	integrase	A7XX23	Thermus_virus	23.6	1.7e-07
WP_012242533.1|617492_618239_+	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA	NA
WP_012242534.1|618222_618435_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_012242535.1|618576_619500_+	DUF4373 domain-containing protein	NA	D2IYU0	Enterococcus_phage	38.5	1.1e-14
WP_012242536.1|619459_619906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242537.1|620001_621489_+	SAM-dependent DNA methyltransferase	NA	A0A2H4PQP4	Staphylococcus_phage	29.2	1.4e-43
WP_012242538.1|621478_622738_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_012242539.1|622742_625886_+	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	27.9	1.4e-66
WP_012242540.1|625955_626942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242541.1|627270_627795_+	hypothetical protein	NA	A0A2K9V3J2	Faecalibacterium_phage	31.1	4.7e-07
627072:627088	attR	TATGCTTTAAGCATATA	NA	NA	NA	NA
WP_064212048.1|627730_628942_+	ParB N-terminal domain-containing protein	NA	Q708N6	Streptococcus_phage	48.9	9.8e-101
WP_012242544.1|629033_629360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242545.1|629337_629772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242546.1|629764_630151_+	hypothetical protein	NA	U5JA61	Bacillus_phage	35.3	2.1e-12
WP_012242547.1|630147_630453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242548.1|630500_631649_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	46.5	6.9e-88
WP_012242549.1|631614_631899_+	HNH endonuclease	NA	A0A126HA81	Lactococcus_phage	46.7	2.6e-12
WP_041633907.1|631964_632996_+	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
WP_012242551.1|633005_634691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064212045.1|634807_636373_+	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	31.1	8.7e-41
WP_064212044.1|636398_637226_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_012242555.1|637253_637586_+	hypothetical protein	NA	A0A290GJQ7	Caldibacillus_phage	32.4	3.8e-07
WP_012242556.1|637582_639220_+|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	40.6	2.4e-110
WP_012242557.1|639237_639762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242558.1|639777_640992_+|portal	phage portal protein	portal	A0A290G4I4	Caldibacillus_phage	31.8	4.6e-42
WP_041633917.1|640975_641170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242559.1|641166_641763_+|head,protease	HK97 family phage prohead protease	head,protease	V5USG3	Enterococcus_phage	39.6	1.6e-24
WP_012242560.1|641767_642895_+|capsid	phage major capsid protein	capsid	H7BUQ0	unidentified_phage	46.7	1.9e-61
WP_012242561.1|642920_643211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242562.1|643197_643536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242563.1|643519_643897_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242564.1|643886_644240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012242565.1|644229_644799_+	hypothetical protein	NA	A6M958	Geobacillus_virus	38.7	2.9e-26
WP_012242566.1|644800_645136_+	hypothetical protein	NA	E3W8G2	Leuconostoc_phage	36.4	8.1e-05
WP_143215669.1|645342_647484_+	hypothetical protein	NA	G8CLB5	Synechococcus_phage	29.3	1.9e-14
>prophage 2
NZ_LS483439	Acholeplasma laidlawii strain NCTC10116 chromosome 1	1497557	959183	969272	1497557	transposase	Bacillus_phage(33.33%)	13	NA	NA
WP_012242877.1|959183_959411_-	helix-turn-helix transcriptional regulator	NA	A0A2K5B261	Erysipelothrix_phage	44.6	2.8e-09
WP_049751954.1|959677_960202_-	DUF1643 domain-containing protein	NA	A0A2D2W2H2	Stenotrophomonas_phage	25.8	6.5e-09
WP_012242879.1|960314_960728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012242880.1|960755_961040_-	HNH endonuclease	NA	A0A0A8WJ48	Clostridium_phage	49.3	9.9e-12
WP_081423662.1|961005_961311_-	methionine adenosyltransferase domain-containing protein	NA	A0A2H4PQS6	Staphylococcus_phage	43.9	3.1e-11
WP_049751955.1|962151_962334_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	45.5	1.4e-06
WP_111724347.1|962334_962937_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	40.3	1.5e-33
WP_041634117.1|963041_963359_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_012242883.1|963759_965571_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.7	2.8e-51
WP_049751957.1|965567_966734_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.8	1.8e-35
WP_081423651.1|966764_967319_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_012242884.1|967395_968016_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_111724348.1|968012_969272_-	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	37.6	1.5e-40
>prophage 3
NZ_LS483439	Acholeplasma laidlawii strain NCTC10116 chromosome 1	1497557	1114967	1124626	1497557		Enterococcus_phage(33.33%)	8	NA	NA
WP_012243023.1|1114967_1115819_-	type II site-specific deoxyribonuclease	NA	A0A2H4JAL2	uncultured_Caudovirales_phage	33.2	1.0e-27
WP_012243024.1|1115815_1116586_-	site-specific DNA-methyltransferase	NA	A0A249XUJ2	Enterococcus_phage	36.1	5.2e-31
WP_012243025.1|1116578_1117406_-	DNA adenine methylase	NA	A0A1S5PRR3	Streptococcus_phage	43.6	5.4e-58
WP_012243026.1|1117655_1118234_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	28.5	1.5e-11
WP_012243027.1|1118228_1118609_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_012243028.1|1118592_1121553_-	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	29.0	3.8e-29
WP_143224621.1|1121588_1122731_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_049751963.1|1122745_1124626_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	27.1	5.7e-23
